RNA–Protein interactions for RNA: ENST00000443563.5

HDAC6-211, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-211ENST00000443563 SV2BQ7L1I2 683 aa11.98□□□□□ -0.49
HDAC6-211ENST00000443563 RTN4RL1Q86UN2 441 aaPredicted RBP11.98□□□□□ -0.49
HDAC6-211ENST00000443563 DEPTORQ8TB45 409 aa11.98□□□□□ -0.49
HDAC6-211ENST00000443563 LINC01599Q8WXQ3 324 aa11.98□□□□□ -0.49
HDAC6-211ENST00000443563 PRIMPOLQ96LW4 560 aa11.98□□□□□ -0.49
HDAC6-211ENST00000443563 YME1L1Q96TA2 773 aa11.98□□□□□ -0.49
HDAC6-211ENST00000443563 TRAIPQ9BWF2 469 aa11.98□□□□□ -0.49
HDAC6-211ENST00000443563 LRRC27Q9C0I9 530 aa11.98□□□□□ -0.49
HDAC6-211ENST00000443563 CUEDC2Q9H467 287 aa11.98□□□□□ -0.49
HDAC6-211ENST00000443563 ELAC1Q9H777 363 aaKnown RBP11.98□□□□□ -0.49
HDAC6-211ENST00000443563 AGPAT5Q9NUQ2 364 aa11.98□□□□□ -0.49
HDAC6-211ENST00000443563 PRMT7Q9NVM4 692 aaPredicted RBP11.98□□□□□ -0.49
HDAC6-211ENST00000443563 LARSQ9P2J5 1176 aaKnown RBP11.98□□□□□ -0.49
HDAC6-211ENST00000443563 ODF2LQ9ULJ1 636 aa11.98□□□□□ -0.49
HDAC6-211ENST00000443563 PIN4Q9Y237 131 aaKnown RBP11.98□□□□□ -0.49
HDAC6-211ENST00000443563 RBM19Q9Y4C8 960 aaKnown RBP11.98□□□□□ -0.49
HDAC6-211ENST00000443563 C9IYK1 514 aa11.97□□□□□ -0.49
HDAC6-211ENST00000443563 H0YCG3 227 aa11.97□□□□□ -0.49
HDAC6-211ENST00000443563 HOXA2O43364 376 aa11.97□□□□□ -0.49
HDAC6-211ENST00000443563 MGEA5O60502 916 aa11.97□□□□□ -0.49
HDAC6-211ENST00000443563 EOMESO95936 686 aa11.97□□□□□ -0.49
HDAC6-211ENST00000443563 KRT18P05783 430 aaKnown RBP11.97□□□□□ -0.49
HDAC6-211ENST00000443563 SCP2P22307 547 aa11.97□□□□□ -0.49
HDAC6-211ENST00000443563 PBX2P40425 430 aa11.97□□□□□ -0.49
HDAC6-211ENST00000443563 STAT6P42226 847 aa11.97□□□□□ -0.49
HDAC6-211ENST00000443563 RAB27AP51159 221 aa11.97□□□□□ -0.49
HDAC6-211ENST00000443563 SMTNP53814 917 aa11.97□□□□□ -0.49
HDAC6-211ENST00000443563 FAM189BP81408 668 aa11.97□□□□□ -0.49
HDAC6-211ENST00000443563 MBTD1Q05BQ5 628 aa11.97□□□□□ -0.49
HDAC6-211ENST00000443563 DHX8Q14562 1220 aaKnown RBP11.97□□□□□ -0.49
HDAC6-211ENST00000443563 MCM6Q14566 821 aa11.97□□□□□ -0.49
HDAC6-211ENST00000443563 PPP2R2DQ66LE6 453 aa11.97□□□□□ -0.49
HDAC6-211ENST00000443563 TWF2Q6IBS0 349 aaKnown RBP11.97□□□□□ -0.49
HDAC6-211ENST00000443563 FAM117BQ6P1L5 589 aa11.97□□□□□ -0.49
HDAC6-211ENST00000443563 NOTUMQ6P988 496 aa11.97□□□□□ -0.49
HDAC6-211ENST00000443563 GPBP1Q86WP2 473 aa11.97□□□□□ -0.49
HDAC6-211ENST00000443563 LEO1Q8WVC0 666 aaPredicted RBP11.97□□□□□ -0.49
HDAC6-211ENST00000443563 RSPH1Q8WYR4 309 aa11.97□□□□□ -0.49
HDAC6-211ENST00000443563 CCDC51Q96ER9 411 aa11.97□□□□□ -0.49
HDAC6-211ENST00000443563 RUSC1Q9BVN2 902 aa11.97□□□□□ -0.49
HDAC6-211ENST00000443563 NKX2-4Q9H2Z4 354 aa11.97□□□□□ -0.49
HDAC6-211ENST00000443563 MINDY3Q9H8M7 445 aa11.97□□□□□ -0.49
HDAC6-211ENST00000443563 BLOC1S4Q9NUP1 217 aa11.97□□□□□ -0.49
HDAC6-211ENST00000443563 TMEM161AQ9NX61 479 aa11.97□□□□□ -0.49
HDAC6-211ENST00000443563 PCDHA7Q9UN72 937 aa11.97□□□□□ -0.49
HDAC6-211ENST00000443563 YBX2Q9Y2T7 364 aaKnown RBP11.97□□□□□ -0.49
HDAC6-211ENST00000443563 RALGAPA2Q2PPJ7 1873 aa11.96□□□□□ -0.49
HDAC6-211ENST00000443563 A0A0U1RQF3 1178 aa11.96□□□□□ -0.49
HDAC6-211ENST00000443563 CCDC169A6NNP5 214 aa11.96□□□□□ -0.49
HDAC6-211ENST00000443563 DGKIO75912 1065 aa11.96□□□□□ -0.49
HDAC6-211ENST00000443563 CA3P07451 260 aa11.96□□□□□ -0.49
HDAC6-211ENST00000443563 PLS3P13797 630 aa11.96□□□□□ -0.49
HDAC6-211ENST00000443563 ABCD1P33897 745 aa11.96□□□□□ -0.49
HDAC6-211ENST00000443563 PEX3P56589 373 aa11.96□□□□□ -0.49
HDAC6-211ENST00000443563 MAPK6Q16659 721 aa11.96□□□□□ -0.49
HDAC6-211ENST00000443563 FAM187BQ17R55 369 aa11.96□□□□□ -0.49
HDAC6-211ENST00000443563 ARSHQ5FYA8 562 aa11.96□□□□□ -0.49
HDAC6-211ENST00000443563 AXDND1Q5T1B0 1012 aaPredicted RBP11.96□□□□□ -0.49
HDAC6-211ENST00000443563 ADALQ6DHV7 355 aa11.96□□□□□ -0.49
HDAC6-211ENST00000443563 PPP4R3CPQ6ZMV5 832 aa11.96□□□□□ -0.49
HDAC6-211ENST00000443563 TMCO2Q7Z6W1 182 aaPredicted RBP11.96□□□□□ -0.49
HDAC6-211ENST00000443563 DEFB123Q8N688 67 aa11.96□□□□□ -0.49
HDAC6-211ENST00000443563 IQUBQ8NA54 791 aa11.96□□□□□ -0.49
HDAC6-211ENST00000443563 CNNM3Q8NE01 707 aa11.96□□□□□ -0.49
HDAC6-211ENST00000443563 SPIRE2Q8WWL2 714 aa11.96□□□□□ -0.49
HDAC6-211ENST00000443563 PGBD4Q96DM1 585 aa11.96□□□□□ -0.49
HDAC6-211ENST00000443563 SAMD11Q96NU1 681 aa11.96□□□□□ -0.49
HDAC6-211ENST00000443563 NTPCRQ9BSD7 190 aaKnown RBP11.96□□□□□ -0.49
HDAC6-211ENST00000443563 SEMA6BQ9H3T3 888 aa11.96□□□□□ -0.49
HDAC6-211ENST00000443563 ZNF576Q9H609 170 aa11.96□□□□□ -0.49
HDAC6-211ENST00000443563 MAGEF1Q9HAY2 307 aa11.96□□□□□ -0.49
HDAC6-211ENST00000443563 KMT5AQ9NQR1 393 aa11.96□□□□□ -0.49
HDAC6-211ENST00000443563 FNDC1Q4ZHG4 1894 aaPredicted RBP11.95□□□□□ -0.5
HDAC6-211ENST00000443563 NLRC5Q86WI3 1866 aa11.95□□□□□ -0.5
HDAC6-211ENST00000443563 ADGRA3Q8IWK6 1321 aa11.95□□□□□ -0.5
HDAC6-211ENST00000443563 K7ERI5 159 aa11.95□□□□□ -0.5
HDAC6-211ENST00000443563 TSPAN1O60635 241 aa11.95□□□□□ -0.5
HDAC6-211ENST00000443563 TBCAO75347 108 aaKnown RBP11.95□□□□□ -0.5
HDAC6-211ENST00000443563 FAM13AO94988 1023 aa11.95□□□□□ -0.5
HDAC6-211ENST00000443563 PRKCBP05771 671 aa11.95□□□□□ -0.5
HDAC6-211ENST00000443563 NPTX2P47972 431 aa11.95□□□□□ -0.5
HDAC6-211ENST00000443563 AMPD3Q01432 767 aa11.95□□□□□ -0.5
HDAC6-211ENST00000443563 RAD51AP2Q09MP3 1159 aa11.95□□□□□ -0.5
HDAC6-211ENST00000443563 MAPK7Q13164 816 aa11.95□□□□□ -0.5
HDAC6-211ENST00000443563 TMEM132AQ24JP5 1023 aa11.95□□□□□ -0.5
HDAC6-211ENST00000443563 RESP18Q5W5W9 173 aa11.95□□□□□ -0.5
HDAC6-211ENST00000443563 SHC4Q6S5L8 630 aa11.95□□□□□ -0.5
HDAC6-211ENST00000443563 APBB1IPQ7Z5R6 666 aaPredicted RBP11.95□□□□□ -0.5
HDAC6-211ENST00000443563 ECHDC2Q86YB7 292 aa11.95□□□□□ -0.5
HDAC6-211ENST00000443563 CMTR2Q8IYT2 770 aaKnown RBP11.95□□□□□ -0.5
HDAC6-211ENST00000443563 HACE1Q8IYU2 909 aa11.95□□□□□ -0.5
HDAC6-211ENST00000443563 ABI1Q8IZP0 508 aa11.95□□□□□ -0.5
HDAC6-211ENST00000443563 DAW1Q8N136 415 aa11.95□□□□□ -0.5
HDAC6-211ENST00000443563 CRIPAKQ8N1N5 446 aa11.95□□□□□ -0.5
HDAC6-211ENST00000443563 FIBCD1Q8N539 461 aa11.95□□□□□ -0.5
HDAC6-211ENST00000443563 PDILTQ8N807 584 aa11.95□□□□□ -0.5
HDAC6-211ENST00000443563 SLC17A8Q8NDX2 589 aa11.95□□□□□ -0.5
HDAC6-211ENST00000443563 SP7Q8TDD2 431 aaPredicted RBP11.95□□□□□ -0.5
HDAC6-211ENST00000443563 BSNDQ8WZ55 320 aa11.95□□□□□ -0.5
HDAC6-211ENST00000443563 ZNF689Q96CS4 500 aaPredicted RBP11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms