RNA–Protein interactions for RNA: ENST00000443443.1

VPS50-206, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-206ENST00000443443 C1SP09871 688 aa6.49□□□□□ -1.37
VPS50-206ENST00000443443 KIR2DL3P43628 341 aa6.49□□□□□ -1.37
VPS50-206ENST00000443443 CNGB1Q14028 1251 aaPredicted RBP6.49□□□□□ -1.37
VPS50-206ENST00000443443 GAGE13Q4V321 117 aa6.49□□□□□ -1.37
VPS50-206ENST00000443443 C11orf74Q86VG3 221 aa6.49□□□□□ -1.37
VPS50-206ENST00000443443 SMC1BQ8NDV3 1235 aa6.49□□□□□ -1.37
VPS50-206ENST00000443443 MIEF2Q96C03 454 aa6.49□□□□□ -1.37
VPS50-206ENST00000443443 PITHD1Q9GZP4 211 aaPredicted RBP6.49□□□□□ -1.37
VPS50-206ENST00000443443 C14orf93Q9H972 538 aaKnown RBP6.49□□□□□ -1.37
VPS50-206ENST00000443443 SPTLC3Q9NUV7 552 aa6.49□□□□□ -1.37
VPS50-206ENST00000443443 AURKAIP1Q9NWT8 199 aaPredicted RBP6.49□□□□□ -1.37
VPS50-206ENST00000443443 HECAQ9UBI9 543 aaPredicted RBP6.49□□□□□ -1.37
VPS50-206ENST00000443443 ELL2O00472 640 aaPredicted RBP6.48□□□□□ -1.37
VPS50-206ENST00000443443 TGM5O43548 720 aa6.48□□□□□ -1.37
VPS50-206ENST00000443443 ZNF202O95125 648 aa6.48□□□□□ -1.37
VPS50-206ENST00000443443 MYCLP1P12525 358 aaPredicted RBP6.48□□□□□ -1.37
VPS50-206ENST00000443443 LSP1P33241 339 aa6.48□□□□□ -1.37
VPS50-206ENST00000443443 NPEPPSP55786 919 aa6.48□□□□□ -1.37
VPS50-206ENST00000443443 RRP1BQ14684 758 aaKnown RBP6.48□□□□□ -1.37
VPS50-206ENST00000443443 ELAVL1Q15717 326 aaKnown RBP6.48□□□□□ -1.37
VPS50-206ENST00000443443 SEPT7Q16181 437 aaKnown RBP6.48□□□□□ -1.37
VPS50-206ENST00000443443 FKBP15Q5T1M5 1219 aa6.48□□□□□ -1.37
VPS50-206ENST00000443443 OSBPL6Q9BZF3 934 aa6.48□□□□□ -1.37
VPS50-206ENST00000443443 EPC1Q9H2F5 836 aa6.48□□□□□ -1.37
VPS50-206ENST00000443443 PARPBPQ9NWS1 579 aa6.48□□□□□ -1.37
VPS50-206ENST00000443443 KCNG1Q9UIX4 513 aa6.48□□□□□ -1.37
VPS50-206ENST00000443443 LCHNA4D1U4 455 aa6.47□□□□□ -1.37
VPS50-206ENST00000443443 FKBP9O95302 570 aa6.47□□□□□ -1.37
VPS50-206ENST00000443443 SLPIP03973 132 aa6.47□□□□□ -1.37
VPS50-206ENST00000443443 XPAP23025 273 aaPredicted RBP6.47□□□□□ -1.37
VPS50-206ENST00000443443 FKBP9P1Q75LS8 142 aa6.47□□□□□ -1.37
VPS50-206ENST00000443443 ELOA2Q8IYF1 753 aaPredicted RBP6.47□□□□□ -1.37
VPS50-206ENST00000443443 CMTM4Q8IZR5 234 aa6.47□□□□□ -1.37
VPS50-206ENST00000443443 ANO3Q9BYT9 981 aa6.47□□□□□ -1.37
VPS50-206ENST00000443443 HAPLN2Q9GZV7 340 aa6.47□□□□□ -1.37
VPS50-206ENST00000443443 USP36Q9P275 1121 aaKnown RBP6.47□□□□□ -1.37
VPS50-206ENST00000443443 REXO2Q9Y3B8 237 aaKnown RBP6.47□□□□□ -1.37
VPS50-206ENST00000443443 PCDHB6Q9Y5E3 794 aa6.47□□□□□ -1.37
VPS50-206ENST00000443443 A0A0A6YYK5 440 aaPredicted RBP6.46□□□□□ -1.38
VPS50-206ENST00000443443 MFAP3LO75121 409 aa6.46□□□□□ -1.38
VPS50-206ENST00000443443 ADAM8P78325 824 aa6.46□□□□□ -1.38
VPS50-206ENST00000443443 ABHD18Q0P651 414 aa6.46□□□□□ -1.38
VPS50-206ENST00000443443 KLF10Q13118 480 aa6.46□□□□□ -1.38
VPS50-206ENST00000443443 TUBA3CQ13748 450 aa6.46□□□□□ -1.38
VPS50-206ENST00000443443 IGFL4Q6B9Z1 124 aa6.46□□□□□ -1.38
VPS50-206ENST00000443443 TUBA3EQ6PEY2 450 aa6.46□□□□□ -1.38
VPS50-206ENST00000443443 TMPRSS6Q8IU80 811 aa6.46□□□□□ -1.38
VPS50-206ENST00000443443 CDYL2Q8N8U2 506 aa6.46□□□□□ -1.38
VPS50-206ENST00000443443 ZNF610Q8N9Z0 462 aa6.46□□□□□ -1.38
VPS50-206ENST00000443443 SOX7Q9BT81 388 aa6.46□□□□□ -1.38
VPS50-206ENST00000443443 MS4A5Q9H3V2 200 aa6.46□□□□□ -1.38
VPS50-206ENST00000443443 ING3Q9NXR8 418 aa6.46□□□□□ -1.38
VPS50-206ENST00000443443 ING1Q9UK53 422 aaPredicted RBP6.46□□□□□ -1.38
VPS50-206ENST00000443443 KRTAP23-1A1A580 65 aa6.45□□□□□ -1.38
VPS50-206ENST00000443443 GAAP10253 952 aa6.45□□□□□ -1.38
VPS50-206ENST00000443443 MCM7P33993 719 aa6.45□□□□□ -1.38
VPS50-206ENST00000443443 ADCYAP1R1P41586 468 aa6.45□□□□□ -1.38
VPS50-206ENST00000443443 LSSP48449 732 aa6.45□□□□□ -1.38
VPS50-206ENST00000443443 SCNN1GP51170 649 aa6.45□□□□□ -1.38
VPS50-206ENST00000443443 CD69Q07108 199 aa6.45□□□□□ -1.38
VPS50-206ENST00000443443 FHL2Q14192 279 aa6.45□□□□□ -1.38
VPS50-206ENST00000443443 MFSD5Q6N075 450 aa6.45□□□□□ -1.38
VPS50-206ENST00000443443 Q6ZRM9 215 aa6.45□□□□□ -1.38
VPS50-206ENST00000443443 ZNF662Q6ZS27 426 aa6.45□□□□□ -1.38
VPS50-206ENST00000443443 FRMD7Q6ZUT3 714 aa6.45□□□□□ -1.38
VPS50-206ENST00000443443 KIAA0907Q7Z7F0 614 aaPredicted RBP6.45□□□□□ -1.38
VPS50-206ENST00000443443 NOP9Q86U38 636 aaKnown RBP6.45□□□□□ -1.38
VPS50-206ENST00000443443 FAM9AQ8IZU1 332 aaPredicted RBP6.45□□□□□ -1.38
VPS50-206ENST00000443443 MB21D1Q8N884 522 aa6.45□□□□□ -1.38
VPS50-206ENST00000443443 OR5M3Q8NGP4 307 aa6.45□□□□□ -1.38
VPS50-206ENST00000443443 GAB3Q8WWW8 586 aa6.45□□□□□ -1.38
VPS50-206ENST00000443443 PGBD4Q96DM1 585 aa6.45□□□□□ -1.38
VPS50-206ENST00000443443 ZNF512Q96ME7 567 aaPredicted RBP6.45□□□□□ -1.38
VPS50-206ENST00000443443 GPR87Q9BY21 358 aa6.45□□□□□ -1.38
VPS50-206ENST00000443443 PCED1AQ9H1Q7 454 aa6.45□□□□□ -1.38
VPS50-206ENST00000443443 NOC2LQ9Y3T9 749 aaKnown RBP6.45□□□□□ -1.38
VPS50-206ENST00000443443 PRSS38A1L453 326 aa6.44□□□□□ -1.38
VPS50-206ENST00000443443 NARSO43776 548 aaKnown RBP6.44□□□□□ -1.38
VPS50-206ENST00000443443 PDE8AO60658 829 aa6.44□□□□□ -1.38
VPS50-206ENST00000443443 ALDH1A2O94788 518 aa6.44□□□□□ -1.38
VPS50-206ENST00000443443 MAN2A2P49641 1150 aa6.44□□□□□ -1.38
VPS50-206ENST00000443443 TERF2Q15554 542 aa6.44□□□□□ -1.38
VPS50-206ENST00000443443 DDB1Q16531 1140 aa6.44□□□□□ -1.38
VPS50-206ENST00000443443 TAF7LQ5H9L4 462 aa6.44□□□□□ -1.38
VPS50-206ENST00000443443 ZBTB41Q5SVQ8 909 aa6.44□□□□□ -1.38
VPS50-206ENST00000443443 GPR158Q5T848 1215 aa6.44□□□□□ -1.38
VPS50-206ENST00000443443 BROXQ5VW32 411 aa6.44□□□□□ -1.38
VPS50-206ENST00000443443 CACTINQ8WUQ7 758 aaKnown RBP6.44□□□□□ -1.38
VPS50-206ENST00000443443 ATXN2LQ8WWM7 1075 aaKnown RBP6.44□□□□□ -1.38
VPS50-206ENST00000443443 USP7Q93009 1102 aa6.44□□□□□ -1.38
VPS50-206ENST00000443443 GNAT2P19087 354 aa6.43□□□□□ -1.38
VPS50-206ENST00000443443 GYS2P54840 703 aa6.43□□□□□ -1.38
VPS50-206ENST00000443443 PHC1P78364 1004 aa6.43□□□□□ -1.38
VPS50-206ENST00000443443 ATP13A4Q4VNC1 1196 aa6.43□□□□□ -1.38
VPS50-206ENST00000443443 LMBR1LQ6UX01 489 aa6.43□□□□□ -1.38
VPS50-206ENST00000443443 PIK3C3Q8NEB9 887 aa6.43□□□□□ -1.38
VPS50-206ENST00000443443 ZNF703Q9H7S9 590 aaPredicted RBP6.43□□□□□ -1.38
VPS50-206ENST00000443443 MMRN2Q9H8L6 949 aa6.43□□□□□ -1.38
VPS50-206ENST00000443443 EMC7Q9NPA0 242 aa6.43□□□□□ -1.38
VPS50-206ENST00000443443 SLC2A4RGQ9NR83 387 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms