RNA–Protein interactions for RNA: ENST00000443016.1

USP6NL-203, Transcript of USP6 N-terminal like, humanhuman

TSL 2

Gene USP6NL, Length 2,491 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-203ENST00000443016 SRGAP2CP0DJJ0 459 aa9.77□□□□□ -0.85
USP6NL-203ENST00000443016 PDCP20941 246 aa9.77□□□□□ -0.85
USP6NL-203ENST00000443016 FAM189BP81408 668 aa9.77□□□□□ -0.85
USP6NL-203ENST00000443016 LEXMQ3ZCV2 418 aa9.77□□□□□ -0.85
USP6NL-203ENST00000443016 ZNF410Q86VK4 478 aa9.77□□□□□ -0.85
USP6NL-203ENST00000443016 C4orf19Q8IY42 314 aa9.77□□□□□ -0.85
USP6NL-203ENST00000443016 SPPL3Q8TCT6 385 aa9.77□□□□□ -0.85
USP6NL-203ENST00000443016 PSPC1Q8WXF1 523 aaKnown RBP9.77□□□□□ -0.85
USP6NL-203ENST00000443016 TNFRSF25Q93038 417 aa9.77□□□□□ -0.85
USP6NL-203ENST00000443016 TMEM117Q9H0C3 514 aa9.77□□□□□ -0.85
USP6NL-203ENST00000443016 WRAP73Q9P2S5 460 aaPredicted RBP9.77□□□□□ -0.85
USP6NL-203ENST00000443016 PIN4Q9Y237 131 aaKnown RBP9.77□□□□□ -0.85
USP6NL-203ENST00000443016 FAM50BQ9Y247 325 aa9.77□□□□□ -0.85
USP6NL-203ENST00000443016 COL4A3BPQ9Y5P4 624 aa9.77□□□□□ -0.85
USP6NL-203ENST00000443016 NLRC5Q86WI3 1866 aa9.77□□□□□ -0.85
USP6NL-203ENST00000443016 A0A0U1RQF3 1178 aa9.76□□□□□ -0.85
USP6NL-203ENST00000443016 RFC5P40937 340 aa9.76□□□□□ -0.85
USP6NL-203ENST00000443016 DSC3Q14574 896 aa9.76□□□□□ -0.85
USP6NL-203ENST00000443016 CSPP1Q1MSJ5 1256 aa9.76□□□□□ -0.85
USP6NL-203ENST00000443016 RBM23Q86U06 439 aaKnown RBP9.76□□□□□ -0.85
USP6NL-203ENST00000443016 ECHDC2Q86YB7 292 aa9.76□□□□□ -0.85
USP6NL-203ENST00000443016 LRRC43Q8N309 656 aa9.76□□□□□ -0.85
USP6NL-203ENST00000443016 TMEM143Q96AN5 459 aa9.76□□□□□ -0.85
USP6NL-203ENST00000443016 CEP89Q96ST8 783 aa9.76□□□□□ -0.85
USP6NL-203ENST00000443016 CHST12Q9NRB3 414 aa9.76□□□□□ -0.85
USP6NL-203ENST00000443016 PUF60Q9UHX1 559 aaKnown RBP9.76□□□□□ -0.85
USP6NL-203ENST00000443016 FGF18O76093 207 aa9.76□□□□□ -0.85
USP6NL-203ENST00000443016 LAG3P18627 525 aa9.76□□□□□ -0.85
USP6NL-203ENST00000443016 SSTR3P32745 418 aaPredicted RBP9.76□□□□□ -0.85
USP6NL-203ENST00000443016 MCM7P33993 719 aa9.76□□□□□ -0.85
USP6NL-203ENST00000443016 SPIRE1Q08AE8 756 aa9.76□□□□□ -0.85
USP6NL-203ENST00000443016 ST3GAL1Q11201 340 aa9.76□□□□□ -0.85
USP6NL-203ENST00000443016 PUS10Q3MIT2 529 aaKnown RBP9.76□□□□□ -0.85
USP6NL-203ENST00000443016 ZNF579Q8NAF0 562 aaKnown RBP9.76□□□□□ -0.85
USP6NL-203ENST00000443016 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.76□□□□□ -0.85
USP6NL-203ENST00000443016 NEK9Q8TD19 979 aa9.76□□□□□ -0.85
USP6NL-203ENST00000443016 TCP11Q8WWU5 503 aa9.76□□□□□ -0.85
USP6NL-203ENST00000443016 PRPF31Q8WWY3 499 aaKnown RBP9.76□□□□□ -0.85
USP6NL-203ENST00000443016 EIF2AK1Q9BQI3 630 aaKnown RBP9.76□□□□□ -0.85
USP6NL-203ENST00000443016 HCSTQ9UBK5 93 aa9.76□□□□□ -0.85
USP6NL-203ENST00000443016 PPME1Q9Y570 386 aa9.76□□□□□ -0.85
USP6NL-203ENST00000443016 RALGAPA2Q2PPJ7 1873 aa9.76□□□□□ -0.85
USP6NL-203ENST00000443016 ZBTB39O15060 712 aa9.75□□□□□ -0.85
USP6NL-203ENST00000443016 SLITRK3O94933 977 aa9.75□□□□□ -0.85
USP6NL-203ENST00000443016 EOMESO95936 686 aa9.75□□□□□ -0.85
USP6NL-203ENST00000443016 IL9P15248 144 aa9.75□□□□□ -0.85
USP6NL-203ENST00000443016 DNAJB1P25685 340 aa9.75□□□□□ -0.85
USP6NL-203ENST00000443016 GJB2P29033 226 aa9.75□□□□□ -0.85
USP6NL-203ENST00000443016 IRS1P35568 1242 aa9.75□□□□□ -0.85
USP6NL-203ENST00000443016 NDUFV1P49821 464 aa9.75□□□□□ -0.85
USP6NL-203ENST00000443016 HYAL1Q12794 435 aa9.75□□□□□ -0.85
USP6NL-203ENST00000443016 CAMK1Q14012 370 aa9.75□□□□□ -0.85
USP6NL-203ENST00000443016 EMC2Q15006 297 aa9.75□□□□□ -0.85
USP6NL-203ENST00000443016 CLUL1Q15846 466 aa9.75□□□□□ -0.85
USP6NL-203ENST00000443016 LONRF3Q496Y0 759 aa9.75□□□□□ -0.85
USP6NL-203ENST00000443016 RNF149Q8NC42 400 aa9.75□□□□□ -0.85
USP6NL-203ENST00000443016 MTRQ99707 1265 aa9.75□□□□□ -0.85
USP6NL-203ENST00000443016 DHX33Q9H6R0 707 aaKnown RBP9.75□□□□□ -0.85
USP6NL-203ENST00000443016 TLR9Q9NR96 1032 aa9.75□□□□□ -0.85
USP6NL-203ENST00000443016 WDR81Q562E7 1941 aa9.75□□□□□ -0.85
USP6NL-203ENST00000443016 TRIOO75962 3097 aa9.75□□□□□ -0.85
USP6NL-203ENST00000443016 POM121CA8CG34 1229 aa9.75□□□□□ -0.85
USP6NL-203ENST00000443016 GAS2O43903 313 aaKnown RBP9.75□□□□□ -0.85
USP6NL-203ENST00000443016 GTF2F1P35269 517 aaKnown RBP eCLIP9.75□□□□□ -0.85
USP6NL-203ENST00000443016 KRT17Q04695 432 aa9.75□□□□□ -0.85
USP6NL-203ENST00000443016 UBE3AQ05086 875 aa9.75□□□□□ -0.85
USP6NL-203ENST00000443016 LAMTOR4Q0VGL1 99 aa9.75□□□□□ -0.85
USP6NL-203ENST00000443016 COLGALT1Q8NBJ5 622 aa9.75□□□□□ -0.85
USP6NL-203ENST00000443016 HELQQ8TDG4 1101 aa9.75□□□□□ -0.85
USP6NL-203ENST00000443016 DRC1Q96MC2 740 aa9.75□□□□□ -0.85
USP6NL-203ENST00000443016 ZNF558Q96NG5 402 aa9.75□□□□□ -0.85
USP6NL-203ENST00000443016 CASD1Q96PB1 797 aa9.75□□□□□ -0.85
USP6NL-203ENST00000443016 SKIP12755 728 aa9.74□□□□□ -0.85
USP6NL-203ENST00000443016 PPM1AP35813 382 aa9.74□□□□□ -0.85
USP6NL-203ENST00000443016 PBX3P40426 434 aa9.74□□□□□ -0.85
USP6NL-203ENST00000443016 PHKA2P46019 1235 aa9.74□□□□□ -0.85
USP6NL-203ENST00000443016 NRIP1P48552 1158 aa9.74□□□□□ -0.85
USP6NL-203ENST00000443016 ALDH7A1P49419 539 aaKnown RBP9.74□□□□□ -0.85
USP6NL-203ENST00000443016 NCBP1Q09161 790 aaKnown RBP9.74□□□□□ -0.85
USP6NL-203ENST00000443016 GSE1Q14687 1217 aa9.74□□□□□ -0.85
USP6NL-203ENST00000443016 KCNT2Q6UVM3 1135 aa9.74□□□□□ -0.85
USP6NL-203ENST00000443016 GLB1LQ6UWU2 654 aa9.74□□□□□ -0.85
USP6NL-203ENST00000443016 HSD17B14Q9BPX1 270 aa9.74□□□□□ -0.85
USP6NL-203ENST00000443016 MRPL9Q9BYD2 267 aaKnown RBP9.74□□□□□ -0.85
USP6NL-203ENST00000443016 TLE6Q9H808 572 aa9.74□□□□□ -0.85
USP6NL-203ENST00000443016 IFT122Q9HBG6 1241 aa9.74□□□□□ -0.85
USP6NL-203ENST00000443016 GRXCR2A6NFK2 248 aa9.74□□□□□ -0.85
USP6NL-203ENST00000443016 POTEMA6NI47 508 aa9.74□□□□□ -0.85
USP6NL-203ENST00000443016 WNT7AO00755 349 aa9.74□□□□□ -0.85
USP6NL-203ENST00000443016 ASAP2O43150 1006 aa9.74□□□□□ -0.85
USP6NL-203ENST00000443016 ERLIN2O94905 339 aa9.74□□□□□ -0.85
USP6NL-203ENST00000443016 CA8P35219 290 aa9.74□□□□□ -0.85
USP6NL-203ENST00000443016 RNASELQ05823 741 aaKnown RBP9.74□□□□□ -0.85
USP6NL-203ENST00000443016 MXD4Q14582 209 aaPredicted RBP9.74□□□□□ -0.85
USP6NL-203ENST00000443016 ADGRD2Q7Z7M1 963 aa9.74□□□□□ -0.85
USP6NL-203ENST00000443016 GJD3Q8N144 294 aa9.74□□□□□ -0.85
USP6NL-203ENST00000443016 FBXO18Q8NFZ0 1043 aa9.74□□□□□ -0.85
USP6NL-203ENST00000443016 PIGOQ8TEQ8 1089 aa9.74□□□□□ -0.85
USP6NL-203ENST00000443016 FOXP1Q9H334 677 aaPredicted RBP9.74□□□□□ -0.85
USP6NL-203ENST00000443016 CWH43Q9H720 699 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms