RNA–Protein interactions for RNA: ENST00000442830.5

PTPRE-203, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 5

Gene PTPRE, Length 779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-203ENST00000442830 TOB2Q14106 344 aaPredicted RBP15.47■□□□□ 0.07
PTPRE-203ENST00000442830 NOMO2Q5JPE7 1267 aa15.47■□□□□ 0.07
PTPRE-203ENST00000442830 PPP4R3AQ6IN85 833 aa15.47■□□□□ 0.07
PTPRE-203ENST00000442830 CATSPER4Q7RTX7 472 aa15.47■□□□□ 0.07
PTPRE-203ENST00000442830 SRGAP1Q7Z6B7 1085 aa15.47■□□□□ 0.07
PTPRE-203ENST00000442830 DDX53Q86TM3 631 aaKnown RBP15.47■□□□□ 0.07
PTPRE-203ENST00000442830 SKAP1Q86WV1 359 aa15.47■□□□□ 0.07
PTPRE-203ENST00000442830 RHPN2Q8IUC4 686 aa15.47■□□□□ 0.07
PTPRE-203ENST00000442830 URGCPQ8TCY9 931 aa15.47■□□□□ 0.07
PTPRE-203ENST00000442830 TCP11Q8WWU5 503 aa15.47■□□□□ 0.07
PTPRE-203ENST00000442830 CEP89Q96ST8 783 aa15.47■□□□□ 0.07
PTPRE-203ENST00000442830 FDXACB1Q9BRP7 624 aaPredicted RBP15.47■□□□□ 0.07
PTPRE-203ENST00000442830 FAM105AQ9NUU6 356 aa15.47■□□□□ 0.07
PTPRE-203ENST00000442830 KANSL3Q9P2N6 904 aa15.47■□□□□ 0.07
PTPRE-203ENST00000442830 HCFC2Q9Y5Z7 792 aa15.47■□□□□ 0.07
PTPRE-203ENST00000442830 STK36Q9NRP7 1315 aa15.46■□□□□ 0.07
PTPRE-203ENST00000442830 ASAP2O43150 1006 aa15.46■□□□□ 0.07
PTPRE-203ENST00000442830 ZC3H11AO75152 810 aaKnown RBP eCLIP15.46■□□□□ 0.07
PTPRE-203ENST00000442830 CTSAP10619 480 aa15.46■□□□□ 0.07
PTPRE-203ENST00000442830 MTMR3Q13615 1198 aa15.46■□□□□ 0.07
PTPRE-203ENST00000442830 LLGL2Q6P1M3 1020 aa15.46■□□□□ 0.07
PTPRE-203ENST00000442830 ELMSAN1Q6PJG2 1045 aa15.46■□□□□ 0.07
PTPRE-203ENST00000442830 OTUD6AQ7L8S5 288 aa15.46■□□□□ 0.07
PTPRE-203ENST00000442830 NEK8Q86SG6 692 aa15.46■□□□□ 0.07
PTPRE-203ENST00000442830 VPS52Q8N1B4 723 aa15.46■□□□□ 0.07
PTPRE-203ENST00000442830 PLCD3Q8N3E9 789 aa15.46■□□□□ 0.07
PTPRE-203ENST00000442830 CNNM3Q8NE01 707 aa15.46■□□□□ 0.07
PTPRE-203ENST00000442830 PSPC1Q8WXF1 523 aaKnown RBP15.46■□□□□ 0.07
PTPRE-203ENST00000442830 WASF1Q92558 559 aa15.46■□□□□ 0.07
PTPRE-203ENST00000442830 ZBP1Q9H171 429 aa15.46■□□□□ 0.07
PTPRE-203ENST00000442830 UBN1Q9NPG3 1134 aa15.46■□□□□ 0.07
PTPRE-203ENST00000442830 CYP26B1Q9NR63 512 aa15.46■□□□□ 0.07
PTPRE-203ENST00000442830 MYO10Q9HD67 2058 aa15.46■□□□□ 0.07
PTPRE-203ENST00000442830 CACNA1HO95180 2353 aa15.45■□□□□ 0.06
PTPRE-203ENST00000442830 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.45■□□□□ 0.06
PTPRE-203ENST00000442830 MARCH6O60337 910 aa15.45■□□□□ 0.06
PTPRE-203ENST00000442830 CLASP2O75122 1294 aaKnown RBP15.45■□□□□ 0.06
PTPRE-203ENST00000442830 STBD1O95210 358 aa15.45■□□□□ 0.06
PTPRE-203ENST00000442830 CXCL14O95715 111 aa15.45■□□□□ 0.06
PTPRE-203ENST00000442830 FGFR4P22455 802 aa15.45■□□□□ 0.06
PTPRE-203ENST00000442830 CA8P35219 290 aa15.45■□□□□ 0.06
PTPRE-203ENST00000442830 LETM2Q2VYF4 491 aa15.45■□□□□ 0.06
PTPRE-203ENST00000442830 KIAA1841Q6NSI8 718 aa15.45■□□□□ 0.06
PTPRE-203ENST00000442830 SLFN12Q8IYM2 578 aa15.45■□□□□ 0.06
PTPRE-203ENST00000442830 IGSF21Q96ID5 467 aa15.45■□□□□ 0.06
PTPRE-203ENST00000442830 ZNF668Q96K58 619 aaPredicted RBP15.45■□□□□ 0.06
PTPRE-203ENST00000442830 NLRP4Q96MN2 994 aa15.45■□□□□ 0.06
PTPRE-203ENST00000442830 EMILIN2Q9BXX0 1053 aa15.45■□□□□ 0.06
PTPRE-203ENST00000442830 SLKQ9H2G2 1235 aaPredicted RBP15.45■□□□□ 0.06
PTPRE-203ENST00000442830 KCNMB3Q9NPA1 279 aa15.45■□□□□ 0.06
PTPRE-203ENST00000442830 AGPAT5Q9NUQ2 364 aa15.45■□□□□ 0.06
PTPRE-203ENST00000442830 DPP7Q9UHL4 492 aa15.45■□□□□ 0.06
PTPRE-203ENST00000442830 SORCS3Q9UPU3 1222 aa15.45■□□□□ 0.06
PTPRE-203ENST00000442830 USTQ9Y2C2 406 aa15.45■□□□□ 0.06
PTPRE-203ENST00000442830 SSX2IPQ9Y2D8 614 aa15.45■□□□□ 0.06
PTPRE-203ENST00000442830 COL4A3BPQ9Y5P4 624 aa15.45■□□□□ 0.06
PTPRE-203ENST00000442830 ARID2Q68CP9 1835 aa15.45■□□□□ 0.06
PTPRE-203ENST00000442830 BAG4O95429 457 aaKnown RBP15.44■□□□□ 0.06
PTPRE-203ENST00000442830 PBX3P40426 434 aa15.44■□□□□ 0.06
PTPRE-203ENST00000442830 RBM10P98175 930 aaKnown RBP15.44■□□□□ 0.06
PTPRE-203ENST00000442830 NCBP1Q09161 790 aaKnown RBP15.44■□□□□ 0.06
PTPRE-203ENST00000442830 DRP2Q13474 957 aa15.44■□□□□ 0.06
PTPRE-203ENST00000442830 ANKRD1Q15327 319 aa15.44■□□□□ 0.06
PTPRE-203ENST00000442830 INF2Q27J81 1249 aa15.44■□□□□ 0.06
PTPRE-203ENST00000442830 ATAT1Q5SQI0 421 aa15.44■□□□□ 0.06
PTPRE-203ENST00000442830 ANO5Q75V66 913 aa15.44■□□□□ 0.06
PTPRE-203ENST00000442830 C4orf19Q8IY42 314 aa15.44■□□□□ 0.06
PTPRE-203ENST00000442830 CCDC51Q96ER9 411 aa15.44■□□□□ 0.06
PTPRE-203ENST00000442830 ASIC4Q96FT7 647 aa15.44■□□□□ 0.06
PTPRE-203ENST00000442830 CEP170P1Q96L14 293 aa15.44■□□□□ 0.06
PTPRE-203ENST00000442830 FAM193BQ96PV7 902 aaPredicted RBP15.44■□□□□ 0.06
PTPRE-203ENST00000442830 TMEM175Q9BSA9 504 aa15.44■□□□□ 0.06
PTPRE-203ENST00000442830 PHF20Q9BVI0 1012 aa15.44■□□□□ 0.06
PTPRE-203ENST00000442830 DHX33Q9H6R0 707 aaKnown RBP15.44■□□□□ 0.06
PTPRE-203ENST00000442830 BRMS1Q9HCU9 246 aa15.44■□□□□ 0.06
PTPRE-203ENST00000442830 PDRG1Q9NUG6 133 aa15.44■□□□□ 0.06
PTPRE-203ENST00000442830 TBC1D13Q9NVG8 400 aa15.44■□□□□ 0.06
PTPRE-203ENST00000442830 EIF5BO60841 1220 aaKnown RBP15.43■□□□□ 0.06
PTPRE-203ENST00000442830 GALTP07902 379 aa15.43■□□□□ 0.06
PTPRE-203ENST00000442830 AXLP30530 894 aa15.43■□□□□ 0.06
PTPRE-203ENST00000442830 MXD4Q14582 209 aaPredicted RBP15.43■□□□□ 0.06
PTPRE-203ENST00000442830 EPHA7Q15375 998 aa15.43■□□□□ 0.06
PTPRE-203ENST00000442830 NPY5RQ15761 445 aa15.43■□□□□ 0.06
PTPRE-203ENST00000442830 ZDHHC14Q8IZN3 488 aa15.43■□□□□ 0.06
PTPRE-203ENST00000442830 TDRD5Q8NAT2 981 aaKnown RBP15.43■□□□□ 0.06
PTPRE-203ENST00000442830 NRDE2Q9H7Z3 1164 aa15.43■□□□□ 0.06
PTPRE-203ENST00000442830 SFXN1Q9H9B4 322 aa15.43■□□□□ 0.06
PTPRE-203ENST00000442830 IFT122Q9HBG6 1241 aa15.43■□□□□ 0.06
PTPRE-203ENST00000442830 TSHZ2Q9NRE2 1034 aa15.43■□□□□ 0.06
PTPRE-203ENST00000442830 DAXXQ9UER7 740 aaPredicted RBP15.43■□□□□ 0.06
PTPRE-203ENST00000442830 VAV3Q9UKW4 847 aa15.43■□□□□ 0.06
PTPRE-203ENST00000442830 PCDHB2Q9Y5E7 798 aa15.43■□□□□ 0.06
PTPRE-203ENST00000442830 DENND4AQ7Z401 1863 aa15.43■□□□□ 0.06
PTPRE-203ENST00000442830 SPDYE4A6NLX3 237 aa15.42■□□□□ 0.06
PTPRE-203ENST00000442830 SLC37A4O43826 429 aa15.42■□□□□ 0.06
PTPRE-203ENST00000442830 OFD1O75665 1012 aa15.42■□□□□ 0.06
PTPRE-203ENST00000442830 ERLIN2O94905 339 aa15.42■□□□□ 0.06
PTPRE-203ENST00000442830 MRPL10Q7Z7H8 261 aaKnown RBP15.42■□□□□ 0.06
PTPRE-203ENST00000442830 CABP7Q86V35 215 aa15.42■□□□□ 0.06
PTPRE-203ENST00000442830 HACE1Q8IYU2 909 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms