RNA–Protein interactions for RNA: ENST00000442216.1

CSNK1E-210, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-210ENST00000442216 ZBTB8OSQ8IWT0 167 aa16.64■□□□□ 0.25
CSNK1E-210ENST00000442216 LARP4BQ92615 738 aaKnown RBP16.64■□□□□ 0.25
CSNK1E-210ENST00000442216 RAD54LQ92698 747 aa16.64■□□□□ 0.25
CSNK1E-210ENST00000442216 ZNF689Q96CS4 500 aaPredicted RBP16.64■□□□□ 0.25
CSNK1E-210ENST00000442216 PRIMPOLQ96LW4 560 aa16.64■□□□□ 0.25
CSNK1E-210ENST00000442216 YME1L1Q96TA2 773 aa16.64■□□□□ 0.25
CSNK1E-210ENST00000442216 RUSC1Q9BVN2 902 aa16.64■□□□□ 0.25
CSNK1E-210ENST00000442216 TMEM161AQ9NX61 479 aa16.64■□□□□ 0.25
CSNK1E-210ENST00000442216 MTMR10Q9NXD2 777 aa16.64■□□□□ 0.25
CSNK1E-210ENST00000442216 LRFN2Q9ULH4 789 aa16.64■□□□□ 0.25
CSNK1E-210ENST00000442216 PCDHB7Q9Y5E2 793 aa16.64■□□□□ 0.25
CSNK1E-210ENST00000442216 LRRIQ4A6NIV6 560 aa16.63■□□□□ 0.25
CSNK1E-210ENST00000442216 INO80B-WBP1J3KQ70 363 aa16.63■□□□□ 0.25
CSNK1E-210ENST00000442216 HIP1RO75146 1068 aa16.63■□□□□ 0.25
CSNK1E-210ENST00000442216 ERLIN2O94905 339 aa16.63■□□□□ 0.25
CSNK1E-210ENST00000442216 EOMESO95936 686 aa16.63■□□□□ 0.25
CSNK1E-210ENST00000442216 RAB27AP51159 221 aa16.63■□□□□ 0.25
CSNK1E-210ENST00000442216 KRT85P78386 507 aa16.63■□□□□ 0.25
CSNK1E-210ENST00000442216 TAP1Q03518 808 aa16.63■□□□□ 0.25
CSNK1E-210ENST00000442216 MBTD1Q05BQ5 628 aa16.63■□□□□ 0.25
CSNK1E-210ENST00000442216 FAM187BQ17R55 369 aa16.63■□□□□ 0.25
CSNK1E-210ENST00000442216 FOXD4L6Q3SYB3 417 aaPredicted RBP16.63■□□□□ 0.25
CSNK1E-210ENST00000442216 FOXD4L3Q6VB84 417 aaPredicted RBP16.63■□□□□ 0.25
CSNK1E-210ENST00000442216 PPP4R3CPQ6ZMV5 832 aa16.63■□□□□ 0.25
CSNK1E-210ENST00000442216 CCDC73Q6ZRK6 1079 aa16.63■□□□□ 0.25
CSNK1E-210ENST00000442216 USP49Q70CQ1 688 aa16.63■□□□□ 0.25
CSNK1E-210ENST00000442216 Q7L0L9 218 aa16.63■□□□□ 0.25
CSNK1E-210ENST00000442216 RSPH1Q8WYR4 309 aa16.63■□□□□ 0.25
CSNK1E-210ENST00000442216 ODF2LQ9ULJ1 636 aa16.63■□□□□ 0.25
CSNK1E-210ENST00000442216 PIN4Q9Y237 131 aaKnown RBP16.63■□□□□ 0.25
CSNK1E-210ENST00000442216 PHLPP2Q6ZVD8 1323 aa16.63■□□□□ 0.25
CSNK1E-210ENST00000442216 KIAA1671Q9BY89 1806 aa16.63■□□□□ 0.25
CSNK1E-210ENST00000442216 LINC01553A4QN01 128 aa16.62■□□□□ 0.25
CSNK1E-210ENST00000442216 HOXA2O43364 376 aa16.62■□□□□ 0.25
CSNK1E-210ENST00000442216 ZNF623O75123 536 aa16.62■□□□□ 0.25
CSNK1E-210ENST00000442216 SSBP05455 408 aaKnown RBP eCLIP16.62■□□□□ 0.25
CSNK1E-210ENST00000442216 HOXA11P31270 313 aaPredicted RBP16.62■□□□□ 0.25
CSNK1E-210ENST00000442216 EFNA5P52803 228 aa16.62■□□□□ 0.25
CSNK1E-210ENST00000442216 MAPK7Q13164 816 aa16.62■□□□□ 0.25
CSNK1E-210ENST00000442216 AXDND1Q5T1B0 1012 aaPredicted RBP16.62■□□□□ 0.25
CSNK1E-210ENST00000442216 RRAGBQ5VZM2 374 aa16.62■□□□□ 0.25
CSNK1E-210ENST00000442216 TWF2Q6IBS0 349 aaKnown RBP16.62■□□□□ 0.25
CSNK1E-210ENST00000442216 ECHDC2Q86YB7 292 aa16.62■□□□□ 0.25
CSNK1E-210ENST00000442216 CMTR2Q8IYT2 770 aaKnown RBP16.62■□□□□ 0.25
CSNK1E-210ENST00000442216 DAW1Q8N136 415 aa16.62■□□□□ 0.25
CSNK1E-210ENST00000442216 DEPTORQ8TB45 409 aa16.62■□□□□ 0.25
CSNK1E-210ENST00000442216 LRRC15Q8TF66 581 aa16.62■□□□□ 0.25
CSNK1E-210ENST00000442216 BSNDQ8WZ55 320 aa16.62■□□□□ 0.25
CSNK1E-210ENST00000442216 CCDC51Q96ER9 411 aa16.62■□□□□ 0.25
CSNK1E-210ENST00000442216 SAMD11Q96NU1 681 aa16.62■□□□□ 0.25
CSNK1E-210ENST00000442216 NTPCRQ9BSD7 190 aaKnown RBP16.62■□□□□ 0.25
CSNK1E-210ENST00000442216 FZD8Q9H461 694 aa16.62■□□□□ 0.25
CSNK1E-210ENST00000442216 PRMT7Q9NVM4 692 aaPredicted RBP16.62■□□□□ 0.25
CSNK1E-210ENST00000442216 ADGRA3Q8IWK6 1321 aa16.62■□□□□ 0.25
CSNK1E-210ENST00000442216 LCHNA4D1U4 455 aa16.61■□□□□ 0.25
CSNK1E-210ENST00000442216 TSPAN1O60635 241 aa16.61■□□□□ 0.25
CSNK1E-210ENST00000442216 ERVK-21P61565 698 aa16.61■□□□□ 0.25
CSNK1E-210ENST00000442216 DMP1Q13316 513 aaPredicted RBP16.61■□□□□ 0.25
CSNK1E-210ENST00000442216 MCM6Q14566 821 aa16.61■□□□□ 0.25
CSNK1E-210ENST00000442216 AMHR2Q16671 573 aa16.61■□□□□ 0.25
CSNK1E-210ENST00000442216 ARSHQ5FYA8 562 aa16.61■□□□□ 0.25
CSNK1E-210ENST00000442216 NOTUMQ6P988 496 aa16.61■□□□□ 0.25
CSNK1E-210ENST00000442216 TGS1Q96RS0 853 aaKnown RBP16.61■□□□□ 0.25
CSNK1E-210ENST00000442216 SCAND2PQ9GZW5 306 aaPredicted RBP16.61■□□□□ 0.25
CSNK1E-210ENST00000442216 FAM105AQ9NUU6 356 aa16.61■□□□□ 0.25
CSNK1E-210ENST00000442216 PCDHA7Q9UN72 937 aa16.61■□□□□ 0.25
CSNK1E-210ENST00000442216 RWDD3Q9Y3V2 267 aa16.61■□□□□ 0.25
CSNK1E-210ENST00000442216 RBM19Q9Y4C8 960 aaKnown RBP16.61■□□□□ 0.25
CSNK1E-210ENST00000442216 LAMA2P24043 3122 aaKnown RBP16.61■□□□□ 0.25
CSNK1E-210ENST00000442216 SCP2P22307 547 aa16.6■□□□□ 0.25
CSNK1E-210ENST00000442216 ANP32AP39687 249 aaKnown RBP16.6■□□□□ 0.25
CSNK1E-210ENST00000442216 NPTX2P47972 431 aa16.6■□□□□ 0.25
CSNK1E-210ENST00000442216 ME1P48163 572 aa16.6■□□□□ 0.25
CSNK1E-210ENST00000442216 GRIN2CQ14957 1233 aa16.6■□□□□ 0.25
CSNK1E-210ENST00000442216 MAPK6Q16659 721 aa16.6■□□□□ 0.25
CSNK1E-210ENST00000442216 NAALADL2Q58DX5 795 aa16.6■□□□□ 0.25
CSNK1E-210ENST00000442216 ZNF598Q86UK7 904 aaKnown RBP16.6■□□□□ 0.25
CSNK1E-210ENST00000442216 GPBP1Q86WP2 473 aa16.6■□□□□ 0.25
CSNK1E-210ENST00000442216 FIBCD1Q8N539 461 aa16.6■□□□□ 0.25
CSNK1E-210ENST00000442216 CNNM3Q8NE01 707 aa16.6■□□□□ 0.25
CSNK1E-210ENST00000442216 SPIRE2Q8WWL2 714 aa16.6■□□□□ 0.25
CSNK1E-210ENST00000442216 KCNN1Q92952 543 aa16.6■□□□□ 0.25
CSNK1E-210ENST00000442216 GUCD1Q96NT3 240 aa16.6■□□□□ 0.25
CSNK1E-210ENST00000442216 CCDC113Q9H0I3 377 aa16.6■□□□□ 0.25
CSNK1E-210ENST00000442216 CUEDC2Q9H467 287 aa16.6■□□□□ 0.25
CSNK1E-210ENST00000442216 TMEM134Q9H6X4 195 aa16.6■□□□□ 0.25
CSNK1E-210ENST00000442216 LARSQ9P2J5 1176 aaKnown RBP16.6■□□□□ 0.25
CSNK1E-210ENST00000442216 A0A1B0GUA9 196 aa16.59■□□□□ 0.25
CSNK1E-210ENST00000442216 H0YCG3 227 aa16.59■□□□□ 0.25
CSNK1E-210ENST00000442216 ACKR2O00590 384 aa16.59■□□□□ 0.25
CSNK1E-210ENST00000442216 ARHGEF15O94989 841 aa16.59■□□□□ 0.25
CSNK1E-210ENST00000442216 PLS3P13797 630 aa16.59■□□□□ 0.25
CSNK1E-210ENST00000442216 ARF4P18085 180 aaPredicted RBP16.59■□□□□ 0.25
CSNK1E-210ENST00000442216 STAT6P42226 847 aa16.59■□□□□ 0.25
CSNK1E-210ENST00000442216 ZNF131P52739 623 aa16.59■□□□□ 0.25
CSNK1E-210ENST00000442216 SMTNP53814 917 aa16.59■□□□□ 0.25
CSNK1E-210ENST00000442216 PEX3P56589 373 aa16.59■□□□□ 0.25
CSNK1E-210ENST00000442216 BTG3Q14201 252 aaPredicted RBP16.59■□□□□ 0.25
CSNK1E-210ENST00000442216 SHC4Q6S5L8 630 aa16.59■□□□□ 0.25
CSNK1E-210ENST00000442216 SV2BQ7L1I2 683 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 587.6 ms