RNA–Protein interactions for RNA: ENST00000441438.2

SYNE2-206, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,084 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-206ENST00000441438 TTBK2Q6IQ55 1244 aa11.42□□□□□ -0.58
SYNE2-206ENST00000441438 WDR73Q6P4I2 378 aa11.42□□□□□ -0.58
SYNE2-206ENST00000441438 TMC6Q7Z403 805 aa11.42□□□□□ -0.58
SYNE2-206ENST00000441438 CENPIQ92674 756 aaPredicted RBP11.42□□□□□ -0.58
SYNE2-206ENST00000441438 INTS12Q96CB8 462 aaKnown RBP11.42□□□□□ -0.58
SYNE2-206ENST00000441438 NT5C1BQ96P26 610 aa11.42□□□□□ -0.58
SYNE2-206ENST00000441438 RIOK1Q9BRS2 568 aaKnown RBP11.42□□□□□ -0.58
SYNE2-206ENST00000441438 AFF2P51816 1311 aa11.42□□□□□ -0.58
SYNE2-206ENST00000441438 GSG1L2A8MUP6 293 aa11.42□□□□□ -0.58
SYNE2-206ENST00000441438 PHF20L1A8MW92 1017 aa11.42□□□□□ -0.58
SYNE2-206ENST00000441438 GRK6P43250 576 aa11.42□□□□□ -0.58
SYNE2-206ENST00000441438 TUFMP49411 452 aaKnown RBP11.42□□□□□ -0.58
SYNE2-206ENST00000441438 BLVRAP53004 296 aa11.42□□□□□ -0.58
SYNE2-206ENST00000441438 AP3M2P53677 418 aa11.42□□□□□ -0.58
SYNE2-206ENST00000441438 DSTNP60981 165 aa11.42□□□□□ -0.58
SYNE2-206ENST00000441438 COG7P83436 770 aa11.42□□□□□ -0.58
SYNE2-206ENST00000441438 CDK17Q00537 523 aa11.42□□□□□ -0.58
SYNE2-206ENST00000441438 KIF5AQ12840 1032 aa11.42□□□□□ -0.58
SYNE2-206ENST00000441438 AARDQ4LEZ3 155 aa11.42□□□□□ -0.58
SYNE2-206ENST00000441438 SLC27A3Q5K4L6 730 aa11.42□□□□□ -0.58
SYNE2-206ENST00000441438 SPATA31A3Q5VYP0 1347 aa11.42□□□□□ -0.58
SYNE2-206ENST00000441438 PCNX4Q63HM2 1172 aa11.42□□□□□ -0.58
SYNE2-206ENST00000441438 LUZP1Q86V48 1076 aa11.42□□□□□ -0.58
SYNE2-206ENST00000441438 IFNL1Q8IU54 200 aa11.42□□□□□ -0.58
SYNE2-206ENST00000441438 SLFN12Q8IYM2 578 aa11.42□□□□□ -0.58
SYNE2-206ENST00000441438 ZBTB8BQ8NAP8 495 aaPredicted RBP11.42□□□□□ -0.58
SYNE2-206ENST00000441438 PCSK9Q8NBP7 692 aaKnown RBP11.42□□□□□ -0.58
SYNE2-206ENST00000441438 CCDC110Q8TBZ0 833 aa11.42□□□□□ -0.58
SYNE2-206ENST00000441438 THAP3Q8WTV1 239 aaPredicted RBP11.42□□□□□ -0.58
SYNE2-206ENST00000441438 CFHR5Q9BXR6 569 aa11.42□□□□□ -0.58
SYNE2-206ENST00000441438 MYLK2Q9H1R3 596 aa11.42□□□□□ -0.58
SYNE2-206ENST00000441438 VPS11Q9H270 941 aa11.42□□□□□ -0.58
SYNE2-206ENST00000441438 LUC7LQ9NQ29 371 aaKnown RBP11.42□□□□□ -0.58
SYNE2-206ENST00000441438 ITGB1BP2Q9UKP3 347 aa11.42□□□□□ -0.58
SYNE2-206ENST00000441438 B4E171 279 aa11.41□□□□□ -0.58
SYNE2-206ENST00000441438 PSMC4P43686 418 aa11.41□□□□□ -0.58
SYNE2-206ENST00000441438 HADHBP55084 474 aaKnown RBP11.41□□□□□ -0.58
SYNE2-206ENST00000441438 YBEYP58557 167 aaPredicted RBP11.41□□□□□ -0.58
SYNE2-206ENST00000441438 DIXDC1Q155Q3 683 aa11.41□□□□□ -0.58
SYNE2-206ENST00000441438 MINDY4Q4G0A6 757 aa11.41□□□□□ -0.58
SYNE2-206ENST00000441438 RIN3Q8TB24 985 aa11.41□□□□□ -0.58
SYNE2-206ENST00000441438 BSNDQ8WZ55 320 aa11.41□□□□□ -0.58
SYNE2-206ENST00000441438 SDF4Q9BRK5 362 aa11.41□□□□□ -0.58
SYNE2-206ENST00000441438 CLSTN2Q9H4D0 955 aa11.41□□□□□ -0.58
SYNE2-206ENST00000441438 MAN1C1Q9NR34 630 aa11.41□□□□□ -0.58
SYNE2-206ENST00000441438 MOCS1Q9NZB8 636 aa11.41□□□□□ -0.58
SYNE2-206ENST00000441438 C19orf53Q9UNZ5 99 aaPredicted RBP11.41□□□□□ -0.58
SYNE2-206ENST00000441438 NUTM2BA6NNL0 878 aaPredicted RBP11.41□□□□□ -0.58
SYNE2-206ENST00000441438 NUTM2EB1AL46 878 aaPredicted RBP11.41□□□□□ -0.58
SYNE2-206ENST00000441438 ACSL4O60488 711 aa11.41□□□□□ -0.58
SYNE2-206ENST00000441438 POTEEQ6S8J3 1075 aa11.41□□□□□ -0.58
SYNE2-206ENST00000441438 CCDC81Q6ZN84 652 aa11.41□□□□□ -0.58
SYNE2-206ENST00000441438 CLEC17AQ6ZS10 378 aa11.41□□□□□ -0.58
SYNE2-206ENST00000441438 SPATC1Q76KD6 591 aa11.41□□□□□ -0.58
SYNE2-206ENST00000441438 CAND1Q86VP6 1230 aaKnown RBP11.41□□□□□ -0.58
SYNE2-206ENST00000441438 NUTM2AQ8IVF1 878 aaPredicted RBP11.41□□□□□ -0.58
SYNE2-206ENST00000441438 AGR3Q8TD06 166 aa11.41□□□□□ -0.58
SYNE2-206ENST00000441438 LRGUKQ96M69 825 aa11.41□□□□□ -0.58
SYNE2-206ENST00000441438 POLKQ9UBT6 870 aa11.41□□□□□ -0.58
SYNE2-206ENST00000441438 PCDHB12Q9Y5F1 795 aa11.41□□□□□ -0.58
SYNE2-206ENST00000441438 RREB1Q92766 1687 aa11.41□□□□□ -0.58
SYNE2-206ENST00000441438 MAPK13O15264 365 aa11.41□□□□□ -0.58
SYNE2-206ENST00000441438 NOS3P29474 1203 aa11.41□□□□□ -0.58
SYNE2-206ENST00000441438 SYDE1Q6ZW31 735 aaPredicted RBP11.41□□□□□ -0.58
SYNE2-206ENST00000441438 HEATR4Q86WZ0 1026 aa11.41□□□□□ -0.58
SYNE2-206ENST00000441438 LPIN2Q92539 896 aa11.41□□□□□ -0.58
SYNE2-206ENST00000441438 VPS39Q96JC1 886 aa11.41□□□□□ -0.58
SYNE2-206ENST00000441438 SGCZQ96LD1 299 aa11.41□□□□□ -0.58
SYNE2-206ENST00000441438 APOL5Q9BWW9 433 aa11.41□□□□□ -0.58
SYNE2-206ENST00000441438 R3HCC1Q9Y3T6 440 aaKnown RBP11.41□□□□□ -0.58
SYNE2-206ENST00000441438 SHANK3Q9BYB0 1731 aa11.4□□□□□ -0.58
SYNE2-206ENST00000441438 A0A087WZG4 1122 aa11.4□□□□□ -0.58
SYNE2-206ENST00000441438 LTA4HP09960 611 aaKnown RBP11.4□□□□□ -0.58
SYNE2-206ENST00000441438 CDK4P11802 303 aa11.4□□□□□ -0.58
SYNE2-206ENST00000441438 ATP5JP18859 108 aa11.4□□□□□ -0.58
SYNE2-206ENST00000441438 ATP5F1P24539 256 aaPredicted RBP11.4□□□□□ -0.58
SYNE2-206ENST00000441438 ATXN1P54253 815 aaKnown RBP11.4□□□□□ -0.58
SYNE2-206ENST00000441438 PMS1P54277 932 aaKnown RBP11.4□□□□□ -0.58
SYNE2-206ENST00000441438 SLC26A5P58743 744 aa11.4□□□□□ -0.58
SYNE2-206ENST00000441438 SPARCL1Q14515 664 aa11.4□□□□□ -0.58
SYNE2-206ENST00000441438 MEI1Q5TIA1 1274 aa11.4□□□□□ -0.58
SYNE2-206ENST00000441438 HID1Q8IV36 788 aa11.4□□□□□ -0.58
SYNE2-206ENST00000441438 RFWD2Q8NHY2 731 aa11.4□□□□□ -0.58
SYNE2-206ENST00000441438 PHF20Q9BVI0 1012 aa11.4□□□□□ -0.58
SYNE2-206ENST00000441438 ADAM33Q9BZ11 813 aa11.4□□□□□ -0.58
SYNE2-206ENST00000441438 C8orf33Q9H7E9 229 aaPredicted RBP11.4□□□□□ -0.58
SYNE2-206ENST00000441438 GLRX2Q9NS18 164 aa11.4□□□□□ -0.58
SYNE2-206ENST00000441438 SAP30BPQ9UHR5 308 aaKnown RBP11.4□□□□□ -0.58
SYNE2-206ENST00000441438 CAB39Q9Y376 341 aaPredicted RBP11.4□□□□□ -0.58
SYNE2-206ENST00000441438 PPIP5K1Q6PFW1 1433 aa11.4□□□□□ -0.58
SYNE2-206ENST00000441438 ZBBXA8MT70 800 aa11.4□□□□□ -0.58
SYNE2-206ENST00000441438 MYO1CO00159 1063 aa11.4□□□□□ -0.58
SYNE2-206ENST00000441438 ENC1O14682 589 aa11.4□□□□□ -0.58
SYNE2-206ENST00000441438 USO1O60763 962 aaKnown RBP11.4□□□□□ -0.58
SYNE2-206ENST00000441438 GLRX3O76003 335 aaKnown RBP11.4□□□□□ -0.58
SYNE2-206ENST00000441438 SLITRK3O94933 977 aa11.4□□□□□ -0.58
SYNE2-206ENST00000441438 EVI2BP34910 448 aa11.4□□□□□ -0.58
SYNE2-206ENST00000441438 MTIF2P46199 727 aaKnown RBP11.4□□□□□ -0.58
SYNE2-206ENST00000441438 KPNA1P52294 538 aaPredicted RBP11.4□□□□□ -0.58
SYNE2-206ENST00000441438 C17orf67Q0P5P2 114 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms