RNA–Protein interactions for RNA: ENST00000440421.2

LTBR-202, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 729 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-202ENST00000440421 ATXN2LQ8WWM7 1075 aaKnown RBP15.25■□□□□ 0.03
LTBR-202ENST00000440421 HLA-CQ95604 372 aa15.25■□□□□ 0.03
LTBR-202ENST00000440421 BHMT2Q9H2M3 363 aa15.25■□□□□ 0.03
LTBR-202ENST00000440421 CWH43Q9H720 699 aa15.25■□□□□ 0.03
LTBR-202ENST00000440421 AAASQ9NRG9 546 aa15.25■□□□□ 0.03
LTBR-202ENST00000440421 FAM105AQ9NUU6 356 aa15.25■□□□□ 0.03
LTBR-202ENST00000440421 PCDHB12Q9Y5F1 795 aa15.25■□□□□ 0.03
LTBR-202ENST00000440421 VWA3AA6NCI4 1184 aa15.24■□□□□ 0.03
LTBR-202ENST00000440421 LRRIQ4A6NIV6 560 aa15.24■□□□□ 0.03
LTBR-202ENST00000440421 E9PMD0 336 aa15.24■□□□□ 0.03
LTBR-202ENST00000440421 SKIP12755 728 aa15.24■□□□□ 0.03
LTBR-202ENST00000440421 CYP11B2P19099 503 aa15.24■□□□□ 0.03
LTBR-202ENST00000440421 PDCP20941 246 aa15.24■□□□□ 0.03
LTBR-202ENST00000440421 HOXA11P31270 313 aaPredicted RBP15.24■□□□□ 0.03
LTBR-202ENST00000440421 MRPS5P82675 430 aaKnown RBP15.24■□□□□ 0.03
LTBR-202ENST00000440421 TCEAL5Q5H9L2 206 aa15.24■□□□□ 0.03
LTBR-202ENST00000440421 TJAP1Q5JTD0 557 aa15.24■□□□□ 0.03
LTBR-202ENST00000440421 BRAPQ7Z569 592 aa15.24■□□□□ 0.03
LTBR-202ENST00000440421 LRRC43Q8N309 656 aa15.24■□□□□ 0.03
LTBR-202ENST00000440421 COLGALT1Q8NBJ5 622 aa15.24■□□□□ 0.03
LTBR-202ENST00000440421 P2RX5Q93086 422 aa15.24■□□□□ 0.03
LTBR-202ENST00000440421 CPB2Q96IY4 423 aa15.24■□□□□ 0.03
LTBR-202ENST00000440421 ASB2Q96Q27 587 aa15.24■□□□□ 0.03
LTBR-202ENST00000440421 TRAIPQ9BWF2 469 aa15.24■□□□□ 0.03
LTBR-202ENST00000440421 COL25A1Q9BXS0 654 aaPredicted RBP15.24■□□□□ 0.03
LTBR-202ENST00000440421 LMAN2LQ9H0V9 348 aa15.24■□□□□ 0.03
LTBR-202ENST00000440421 POLD4Q9HCU8 107 aa15.24■□□□□ 0.03
LTBR-202ENST00000440421 STK24Q9Y6E0 443 aa15.24■□□□□ 0.03
LTBR-202ENST00000440421 MEIS3P2A8K0S8 358 aa15.23■□□□□ 0.03
LTBR-202ENST00000440421 TSPAN1O60635 241 aa15.23■□□□□ 0.03
LTBR-202ENST00000440421 LAG3P18627 525 aa15.23■□□□□ 0.03
LTBR-202ENST00000440421 SYT1P21579 422 aa15.23■□□□□ 0.03
LTBR-202ENST00000440421 DNAJB1P25685 340 aa15.23■□□□□ 0.03
LTBR-202ENST00000440421 RAB27AP51159 221 aa15.23■□□□□ 0.03
LTBR-202ENST00000440421 MBTD1Q05BQ5 628 aa15.23■□□□□ 0.03
LTBR-202ENST00000440421 POU5F1BQ06416 359 aa15.23■□□□□ 0.03
LTBR-202ENST00000440421 NAALADL2Q58DX5 795 aa15.23■□□□□ 0.03
LTBR-202ENST00000440421 UBXN11Q5T124 520 aa15.23■□□□□ 0.03
LTBR-202ENST00000440421 IFNLR1Q8IU57 520 aaPredicted RBP15.23■□□□□ 0.03
LTBR-202ENST00000440421 THNSL1Q8IYQ7 743 aa15.23■□□□□ 0.03
LTBR-202ENST00000440421 SPPL3Q8TCT6 385 aa15.23■□□□□ 0.03
LTBR-202ENST00000440421 POF1BQ8WVV4 589 aa15.23■□□□□ 0.03
LTBR-202ENST00000440421 BSNDQ8WZ55 320 aa15.23■□□□□ 0.03
LTBR-202ENST00000440421 INTS4Q96HW7 963 aaKnown RBP15.23■□□□□ 0.03
LTBR-202ENST00000440421 MMTAG2Q9BU76 263 aaKnown RBP15.23■□□□□ 0.03
LTBR-202ENST00000440421 NSUN3Q9H649 340 aaKnown RBP15.23■□□□□ 0.03
LTBR-202ENST00000440421 COG5Q9UP83 839 aa15.23■□□□□ 0.03
LTBR-202ENST00000440421 DNM3Q9UQ16 869 aa15.23■□□□□ 0.03
LTBR-202ENST00000440421 INPP5FQ9Y2H2 1132 aa15.23■□□□□ 0.03
LTBR-202ENST00000440421 PCDHB2Q9Y5E7 798 aa15.23■□□□□ 0.03
LTBR-202ENST00000440421 ATG2AQ2TAZ0 1938 aa15.23■□□□□ 0.03
LTBR-202ENST00000440421 REV3LO60673 3130 aa15.23■□□□□ 0.03
LTBR-202ENST00000440421 PLXNA4Q9HCM2 1894 aa15.23■□□□□ 0.03
LTBR-202ENST00000440421 B4GALT5O43286 388 aa15.22■□□□□ 0.03
LTBR-202ENST00000440421 FGF18O76093 207 aa15.22■□□□□ 0.03
LTBR-202ENST00000440421 PBX3P40426 434 aa15.22■□□□□ 0.03
LTBR-202ENST00000440421 KCNQ1P51787 676 aa15.22■□□□□ 0.03
LTBR-202ENST00000440421 NCBP1Q09161 790 aaKnown RBP15.22■□□□□ 0.03
LTBR-202ENST00000440421 CAMK1Q14012 370 aa15.22■□□□□ 0.03
LTBR-202ENST00000440421 ARL6IP4Q66PJ3 421 aaKnown RBP15.22■□□□□ 0.03
LTBR-202ENST00000440421 GLB1LQ6UWU2 654 aa15.22■□□□□ 0.03
LTBR-202ENST00000440421 EP400NLQ6ZTU2 488 aa15.22■□□□□ 0.03
LTBR-202ENST00000440421 KCNK18Q7Z418 384 aa15.22■□□□□ 0.03
LTBR-202ENST00000440421 PGBD4Q96DM1 585 aa15.22■□□□□ 0.03
LTBR-202ENST00000440421 PLIN2Q99541 437 aa15.22■□□□□ 0.03
LTBR-202ENST00000440421 UNC80Q8N2C7 3258 aa15.22■□□□□ 0.03
LTBR-202ENST00000440421 ZNF623O75123 536 aa15.21■□□□□ 0.03
LTBR-202ENST00000440421 EYA4O95677 639 aa15.21■□□□□ 0.03
LTBR-202ENST00000440421 ARF4P18085 180 aaPredicted RBP15.21■□□□□ 0.03
LTBR-202ENST00000440421 LIG1P18858 919 aa15.21■□□□□ 0.03
LTBR-202ENST00000440421 AXLP30530 894 aa15.21■□□□□ 0.03
LTBR-202ENST00000440421 IRS1P35568 1242 aa15.21■□□□□ 0.03
LTBR-202ENST00000440421 PCBP1Q15365 356 aaKnown RBP eCLIP15.21■□□□□ 0.03
LTBR-202ENST00000440421 SF3A1Q15459 793 aaKnown RBP15.21■□□□□ 0.03
LTBR-202ENST00000440421 AMHR2Q16671 573 aa15.21■□□□□ 0.03
LTBR-202ENST00000440421 AAK1Q2M2I8 961 aa15.21■□□□□ 0.03
LTBR-202ENST00000440421 NOTUMQ6P988 496 aa15.21■□□□□ 0.03
LTBR-202ENST00000440421 KCNT2Q6UVM3 1135 aa15.21■□□□□ 0.03
LTBR-202ENST00000440421 CDR2LQ86X02 465 aaPredicted RBP15.21■□□□□ 0.03
LTBR-202ENST00000440421 ZBTB8OSQ8IWT0 167 aa15.21■□□□□ 0.03
LTBR-202ENST00000440421 DEPTORQ8TB45 409 aa15.21■□□□□ 0.03
LTBR-202ENST00000440421 SNX21Q969T3 373 aa15.21■□□□□ 0.03
LTBR-202ENST00000440421 ZNF558Q96NG5 402 aa15.21■□□□□ 0.03
LTBR-202ENST00000440421 EIF2AQ9BY44 585 aaKnown RBP15.21■□□□□ 0.03
LTBR-202ENST00000440421 MRPL9Q9BYD2 267 aaKnown RBP15.21■□□□□ 0.03
LTBR-202ENST00000440421 NFKBIZQ9BYH8 718 aa15.21■□□□□ 0.03
LTBR-202ENST00000440421 UBE2ZQ9H832 354 aaPredicted RBP15.21■□□□□ 0.03
LTBR-202ENST00000440421 PCDHGC5Q9Y5F6 944 aa15.21■□□□□ 0.03
LTBR-202ENST00000440421 OFD1O75665 1012 aa15.2■□□□□ 0.02
LTBR-202ENST00000440421 SSBP05455 408 aaKnown RBP eCLIP15.2■□□□□ 0.02
LTBR-202ENST00000440421 KCNA5P22460 613 aa15.2■□□□□ 0.02
LTBR-202ENST00000440421 RESTQ13127 1097 aa15.2■□□□□ 0.02
LTBR-202ENST00000440421 CSPP1Q1MSJ5 1256 aa15.2■□□□□ 0.02
LTBR-202ENST00000440421 NOMO2Q5JPE7 1267 aa15.2■□□□□ 0.02
LTBR-202ENST00000440421 FAM173BQ6P4H8 233 aa15.2■□□□□ 0.02
LTBR-202ENST00000440421 AGMOQ6ZNB7 445 aa15.2■□□□□ 0.02
LTBR-202ENST00000440421 MRPL10Q7Z7H8 261 aaKnown RBP15.2■□□□□ 0.02
LTBR-202ENST00000440421 HSCBQ8IWL3 235 aa15.2■□□□□ 0.02
LTBR-202ENST00000440421 SMG8Q8ND04 991 aaKnown RBP15.2■□□□□ 0.02
LTBR-202ENST00000440421 MICAL1Q8TDZ2 1067 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms