RNA–Protein interactions for RNA: ENST00000439274.6

APP-208, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 2,517 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-208ENST00000439274 GAS7O60861 476 aa16.64■□□□□ 0.25
APP-208ENST00000439274 CAND2O75155 1236 aa16.64■□□□□ 0.25
APP-208ENST00000439274 PPFIA2O75334 1257 aa16.64■□□□□ 0.25
APP-208ENST00000439274 PRELPP51888 382 aa16.64■□□□□ 0.25
APP-208ENST00000439274 NFIL3Q16649 462 aa16.64■□□□□ 0.25
APP-208ENST00000439274 DUPD1Q68J44 220 aa16.64■□□□□ 0.25
APP-208ENST00000439274 ZNF746Q6NUN9 644 aaPredicted RBP16.64■□□□□ 0.25
APP-208ENST00000439274 FBXO41Q8TF61 875 aa16.64■□□□□ 0.25
APP-208ENST00000439274 KRT35Q92764 455 aa16.64■□□□□ 0.25
APP-208ENST00000439274 C18orf8Q96DM3 657 aa16.64■□□□□ 0.25
APP-208ENST00000439274 CAMKK2Q96RR4 588 aa16.64■□□□□ 0.25
APP-208ENST00000439274 ERP44Q9BS26 406 aa16.64■□□□□ 0.25
APP-208ENST00000439274 CARD9Q9H257 536 aa16.64■□□□□ 0.25
APP-208ENST00000439274 EPB41L4BQ9H329 900 aa16.64■□□□□ 0.25
APP-208ENST00000439274 UNC45AQ9H3U1 944 aa16.64■□□□□ 0.25
APP-208ENST00000439274 ZDHHC18Q9NUE0 388 aa16.64■□□□□ 0.25
APP-208ENST00000439274 DAAM1Q9Y4D1 1078 aa16.64■□□□□ 0.25
APP-208ENST00000439274 TULP1O00294 542 aaPredicted RBP16.63■□□□□ 0.25
APP-208ENST00000439274 PIK3CDO00329 1044 aa16.63■□□□□ 0.25
APP-208ENST00000439274 ARP10275 920 aa16.63■□□□□ 0.25
APP-208ENST00000439274 KRT13P13646 458 aa16.63■□□□□ 0.25
APP-208ENST00000439274 NPR1P16066 1061 aa16.63■□□□□ 0.25
APP-208ENST00000439274 PLTPP55058 493 aa16.63■□□□□ 0.25
APP-208ENST00000439274 EN1Q05925 392 aaPredicted RBP16.63■□□□□ 0.25
APP-208ENST00000439274 BFSP1Q12934 665 aa16.63■□□□□ 0.25
APP-208ENST00000439274 PPP2R5CQ13362 524 aa16.63■□□□□ 0.25
APP-208ENST00000439274 SYCP3Q8IZU3 236 aa16.63■□□□□ 0.25
APP-208ENST00000439274 SLC5A5Q92911 643 aa16.63■□□□□ 0.25
APP-208ENST00000439274 PSMD1Q99460 953 aa16.63■□□□□ 0.25
APP-208ENST00000439274 RAB17Q9H0T7 212 aa16.63■□□□□ 0.25
APP-208ENST00000439274 ZNF219Q9P2Y4 722 aaPredicted RBP16.63■□□□□ 0.25
APP-208ENST00000439274 PNMA2Q9UL42 364 aa16.63■□□□□ 0.25
APP-208ENST00000439274 ALG6Q9Y672 507 aa16.63■□□□□ 0.25
APP-208ENST00000439274 ANKRD62A6NC57 917 aa16.63■□□□□ 0.25
APP-208ENST00000439274 SRRM3A6NNA2 597 aaPredicted RBP16.63■□□□□ 0.25
APP-208ENST00000439274 PHF20L1A8MW92 1017 aa16.63■□□□□ 0.25
APP-208ENST00000439274 DDX39AO00148 427 aaKnown RBP16.63■□□□□ 0.25
APP-208ENST00000439274 MNAT1P51948 309 aa16.63■□□□□ 0.25
APP-208ENST00000439274 ZNF131P52739 623 aa16.63■□□□□ 0.25
APP-208ENST00000439274 RBM26Q5T8P6 1007 aaKnown RBP16.63■□□□□ 0.25
APP-208ENST00000439274 BTNL9Q6UXG8 535 aa16.63■□□□□ 0.25
APP-208ENST00000439274 JAMLQ86YT9 394 aa16.63■□□□□ 0.25
APP-208ENST00000439274 ARHGEF19Q8IW93 802 aa16.63■□□□□ 0.25
APP-208ENST00000439274 CCDC13Q8IYE1 715 aa16.63■□□□□ 0.25
APP-208ENST00000439274 NLGN1Q8N2Q7 840 aa16.63■□□□□ 0.25
APP-208ENST00000439274 LMO3Q8TAP4 145 aa16.63■□□□□ 0.25
APP-208ENST00000439274 AGPAT1Q99943 283 aa16.63■□□□□ 0.25
APP-208ENST00000439274 UBE2TQ9NPD8 197 aaPredicted RBP16.63■□□□□ 0.25
APP-208ENST00000439274 SMIM23A6NLE4 172 aa16.62■□□□□ 0.25
APP-208ENST00000439274 MMP10P09238 476 aa16.62■□□□□ 0.25
APP-208ENST00000439274 VCAM1P19320 739 aa16.62■□□□□ 0.25
APP-208ENST00000439274 ACTN3Q08043 901 aaPredicted RBP16.62■□□□□ 0.25
APP-208ENST00000439274 BYSLQ13895 437 aaKnown RBP16.62■□□□□ 0.25
APP-208ENST00000439274 DACT2Q5SW24 774 aa16.62■□□□□ 0.25
APP-208ENST00000439274 ACER1Q8TDN7 264 aa16.62■□□□□ 0.25
APP-208ENST00000439274 VCPKMTQ9H867 229 aa16.62■□□□□ 0.25
APP-208ENST00000439274 PKD2L1Q9P0L9 805 aa16.62■□□□□ 0.25
APP-208ENST00000439274 CTTNBP2NLQ9P2B4 639 aa16.62■□□□□ 0.25
APP-208ENST00000439274 GOLGA6L10A0A0M3HER8 536 aa16.62■□□□□ 0.25
APP-208ENST00000439274 HIP1RO75146 1068 aa16.62■□□□□ 0.25
APP-208ENST00000439274 HMGB2P26583 209 aaKnown RBP16.62■□□□□ 0.25
APP-208ENST00000439274 STAT2P52630 851 aa16.62■□□□□ 0.25
APP-208ENST00000439274 KIF22Q14807 665 aa16.62■□□□□ 0.25
APP-208ENST00000439274 ZDHHC24Q6UX98 284 aa16.62■□□□□ 0.25
APP-208ENST00000439274 PODNQ7Z5L7 613 aa16.62■□□□□ 0.25
APP-208ENST00000439274 CPNE8Q86YQ8 564 aa16.62■□□□□ 0.25
APP-208ENST00000439274 ZDHHC14Q8IZN3 488 aa16.62■□□□□ 0.25
APP-208ENST00000439274 DAW1Q8N136 415 aa16.62■□□□□ 0.25
APP-208ENST00000439274 ZSWIM2Q8NEG5 633 aa16.62■□□□□ 0.25
APP-208ENST00000439274 FBXO25Q8TCJ0 367 aa16.62■□□□□ 0.25
APP-208ENST00000439274 SEC16BQ96JE7 1060 aa16.62■□□□□ 0.25
APP-208ENST00000439274 LXNQ9BS40 222 aa16.62■□□□□ 0.25
APP-208ENST00000439274 EMSYQ7Z589 1322 aa16.62■□□□□ 0.25
APP-208ENST00000439274 ATMINO43313 823 aaPredicted RBP16.61■□□□□ 0.25
APP-208ENST00000439274 FTLP02792 175 aaPredicted RBP16.61■□□□□ 0.25
APP-208ENST00000439274 SF3A3Q12874 501 aaKnown RBP eCLIP16.61■□□□□ 0.25
APP-208ENST00000439274 PPP2R5AQ15172 486 aa16.61■□□□□ 0.25
APP-208ENST00000439274 UHMK1Q8TAS1 419 aaKnown RBP16.61■□□□□ 0.25
APP-208ENST00000439274 KAT5Q92993 513 aa16.61■□□□□ 0.25
APP-208ENST00000439274 RNF25Q96BH1 459 aaPredicted RBP16.61■□□□□ 0.25
APP-208ENST00000439274 TLCD1Q96CP7 247 aa16.61■□□□□ 0.25
APP-208ENST00000439274 CABS1Q96KC9 395 aa16.61■□□□□ 0.25
APP-208ENST00000439274 NACC1Q96RE7 527 aa16.61■□□□□ 0.25
APP-208ENST00000439274 ZNF577Q9BSK1 485 aa16.61■□□□□ 0.25
APP-208ENST00000439274 OSBPL7Q9BZF2 842 aa16.61■□□□□ 0.25
APP-208ENST00000439274 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.61■□□□□ 0.25
APP-208ENST00000439274 SCN9AQ15858 1988 aa16.61■□□□□ 0.25
APP-208ENST00000439274 TLDC2A0PJX2 215 aa16.61■□□□□ 0.25
APP-208ENST00000439274 KIAA0391O15091 583 aaKnown RBP16.61■□□□□ 0.25
APP-208ENST00000439274 POLR2MP0CAP2 368 aa16.61■□□□□ 0.25
APP-208ENST00000439274 USP8P40818 1118 aa16.61■□□□□ 0.25
APP-208ENST00000439274 PMS2P54278 862 aa16.61■□□□□ 0.25
APP-208ENST00000439274 PPP3CAQ08209 521 aa16.61■□□□□ 0.25
APP-208ENST00000439274 MAPK7Q13164 816 aa16.61■□□□□ 0.25
APP-208ENST00000439274 CCDC121Q6ZUS5 278 aa16.61■□□□□ 0.25
APP-208ENST00000439274 FLAD1Q8NFF5 587 aa16.61■□□□□ 0.25
APP-208ENST00000439274 IPO4Q8TEX9 1081 aaKnown RBP16.61■□□□□ 0.25
APP-208ENST00000439274 ZNF622Q969S3 477 aaKnown RBP eCLIP16.61■□□□□ 0.25
APP-208ENST00000439274 ACP6Q9NPH0 428 aa16.61■□□□□ 0.25
APP-208ENST00000439274 SEL1LQ9UBV2 794 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms