RNA–Protein interactions for RNA: ENST00000439235.5

CHD3-204, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-204ENST00000439235 ADGRA3Q8IWK6 1321 aa22.78■■□□□ 1.24
CHD3-204ENST00000439235 SMTNL1A8MU46 457 aa22.77■■□□□ 1.24
CHD3-204ENST00000439235 SRGAP2CP0DJJ0 459 aa22.77■■□□□ 1.24
CHD3-204ENST00000439235 GPC3P51654 580 aa22.77■■□□□ 1.24
CHD3-204ENST00000439235 PTK7Q13308 1070 aa22.77■■□□□ 1.24
CHD3-204ENST00000439235 KNOP1Q1ED39 458 aaKnown RBP22.77■■□□□ 1.24
CHD3-204ENST00000439235 KSR1Q8IVT5 923 aa22.77■■□□□ 1.24
CHD3-204ENST00000439235 DNAJB3Q8WWF6 145 aa22.77■■□□□ 1.24
CHD3-204ENST00000439235 NLRP7Q8WX94 980 aa22.77■■□□□ 1.24
CHD3-204ENST00000439235 TSG101Q99816 390 aa22.77■■□□□ 1.24
CHD3-204ENST00000439235 TMEM134Q9H6X4 195 aa22.77■■□□□ 1.24
CHD3-204ENST00000439235 CBX8Q9HC52 389 aa22.77■■□□□ 1.24
CHD3-204ENST00000439235 TBX20Q9UMR3 447 aa22.77■■□□□ 1.24
CHD3-204ENST00000439235 MYH11P35749 1972 aa22.76■■□□□ 1.23
CHD3-204ENST00000439235 BECN2A8MW95 431 aa22.76■■□□□ 1.23
CHD3-204ENST00000439235 M0QZ92 97 aa22.76■■□□□ 1.23
CHD3-204ENST00000439235 MYL5Q02045 173 aa22.76■■□□□ 1.23
CHD3-204ENST00000439235 STRN3Q13033 797 aa22.76■■□□□ 1.23
CHD3-204ENST00000439235 FOXR2Q6PJQ5 311 aa22.76■■□□□ 1.23
CHD3-204ENST00000439235 PPP4R3CPQ6ZMV5 832 aa22.76■■□□□ 1.23
CHD3-204ENST00000439235 RPAINQ86UA6 219 aa22.76■■□□□ 1.23
CHD3-204ENST00000439235 GAS2L3Q86XJ1 694 aa22.76■■□□□ 1.23
CHD3-204ENST00000439235 IFNLR1Q8IU57 520 aaPredicted RBP22.76■■□□□ 1.23
CHD3-204ENST00000439235 MAP4K3Q8IVH8 894 aa22.76■■□□□ 1.23
CHD3-204ENST00000439235 AOPEPQ8N6M6 819 aa22.76■■□□□ 1.23
CHD3-204ENST00000439235 SENP6Q9GZR1 1112 aaPredicted RBP22.76■■□□□ 1.23
CHD3-204ENST00000439235 HTTP42858 3142 aa22.76■■□□□ 1.23
CHD3-204ENST00000439235 MROH7Q68CQ1 1323 aa22.76■■□□□ 1.23
CHD3-204ENST00000439235 A0A087WZ62 844 aa22.75■■□□□ 1.23
CHD3-204ENST00000439235 K7ERI5 159 aa22.75■■□□□ 1.23
CHD3-204ENST00000439235 IKBKBO14920 756 aa22.75■■□□□ 1.23
CHD3-204ENST00000439235 MNX1P50219 401 aaPredicted RBP22.75■■□□□ 1.23
CHD3-204ENST00000439235 NLRP11P59045 1033 aaKnown RBP22.75■■□□□ 1.23
CHD3-204ENST00000439235 PTENP60484 403 aa22.75■■□□□ 1.23
CHD3-204ENST00000439235 LRRC63Q05C16 580 aa22.75■■□□□ 1.23
CHD3-204ENST00000439235 CENPPQ6IPU0 288 aa22.75■■□□□ 1.23
CHD3-204ENST00000439235 SYCP3Q8IZU3 236 aa22.75■■□□□ 1.23
CHD3-204ENST00000439235 GOLGA5Q8TBA6 731 aa22.75■■□□□ 1.23
CHD3-204ENST00000439235 ENOX1Q8TC92 643 aaKnown RBP22.75■■□□□ 1.23
CHD3-204ENST00000439235 FDXACB1Q9BRP7 624 aaPredicted RBP22.75■■□□□ 1.23
CHD3-204ENST00000439235 TRMT13Q9NUP7 481 aaKnown RBP22.75■■□□□ 1.23
CHD3-204ENST00000439235 TYW1Q9NV66 732 aaKnown RBP22.75■■□□□ 1.23
CHD3-204ENST00000439235 KAT6AQ92794 2004 aa22.74■■□□□ 1.23
CHD3-204ENST00000439235 CALUO43852 315 aaPredicted RBP22.74■■□□□ 1.23
CHD3-204ENST00000439235 CAND2O75155 1236 aa22.74■■□□□ 1.23
CHD3-204ENST00000439235 CDK7P50613 346 aa22.74■■□□□ 1.23
CHD3-204ENST00000439235 STX17P56962 302 aa22.74■■□□□ 1.23
CHD3-204ENST00000439235 MAPK6Q16659 721 aa22.74■■□□□ 1.23
CHD3-204ENST00000439235 TPD52L1Q16890 204 aaPredicted RBP22.74■■□□□ 1.23
CHD3-204ENST00000439235 HS2ST1Q7LGA3 356 aa22.74■■□□□ 1.23
CHD3-204ENST00000439235 SRGAP1Q7Z6B7 1085 aa22.74■■□□□ 1.23
CHD3-204ENST00000439235 RNF214Q8ND24 703 aa22.74■■□□□ 1.23
CHD3-204ENST00000439235 PPP1R16BQ96T49 567 aa22.74■■□□□ 1.23
CHD3-204ENST00000439235 GCOM2Q9BZD3 368 aaPredicted RBP22.74■■□□□ 1.23
CHD3-204ENST00000439235 GBP3Q9H0R5 595 aa22.74■■□□□ 1.23
CHD3-204ENST00000439235 KCTD10Q9H3F6 313 aa22.74■■□□□ 1.23
CHD3-204ENST00000439235 SEMA6BQ9H3T3 888 aa22.74■■□□□ 1.23
CHD3-204ENST00000439235 ZMYM2Q9UBW7 1377 aa22.74■■□□□ 1.23
CHD3-204ENST00000439235 GOLGA6L19H0YKK7 550 aa22.73■■□□□ 1.23
CHD3-204ENST00000439235 PDXKO00764 312 aa22.73■■□□□ 1.23
CHD3-204ENST00000439235 TLR3O15455 904 aaKnown RBP22.73■■□□□ 1.23
CHD3-204ENST00000439235 B4GALT4O60513 344 aa22.73■■□□□ 1.23
CHD3-204ENST00000439235 GPR32O75388 356 aa22.73■■□□□ 1.23
CHD3-204ENST00000439235 COL6A1P12109 1028 aa22.73■■□□□ 1.23
CHD3-204ENST00000439235 SNRPFP62306 86 aaKnown RBP22.73■■□□□ 1.23
CHD3-204ENST00000439235 TPM4P67936 248 aa22.73■■□□□ 1.23
CHD3-204ENST00000439235 MRPS6P82932 125 aaKnown RBP22.73■■□□□ 1.23
CHD3-204ENST00000439235 IQCB1Q15051 598 aa22.73■■□□□ 1.23
CHD3-204ENST00000439235 KIZQ2M2Z5 673 aa22.73■■□□□ 1.23
CHD3-204ENST00000439235 TTI2Q6NXR4 508 aa22.73■■□□□ 1.23
CHD3-204ENST00000439235 ZNF668Q96K58 619 aaPredicted RBP22.73■■□□□ 1.23
CHD3-204ENST00000439235 CTAGE1Q96RT6 745 aa22.73■■□□□ 1.23
CHD3-204ENST00000439235 INO80BQ9C086 356 aaPredicted RBP22.73■■□□□ 1.23
CHD3-204ENST00000439235 CCDC113Q9H0I3 377 aa22.73■■□□□ 1.23
CHD3-204ENST00000439235 ADAMTS10Q9H324 1103 aa22.73■■□□□ 1.23
CHD3-204ENST00000439235 C11orf49Q9H6J7 331 aa22.73■■□□□ 1.23
CHD3-204ENST00000439235 IFT122Q9HBG6 1241 aa22.73■■□□□ 1.23
CHD3-204ENST00000439235 PRMT7Q9NVM4 692 aaPredicted RBP22.73■■□□□ 1.23
CHD3-204ENST00000439235 CGNQ9P2M7 1197 aaKnown RBP22.73■■□□□ 1.23
CHD3-204ENST00000439235 TRAF3IP3Q9Y228 551 aa22.73■■□□□ 1.23
CHD3-204ENST00000439235 TRPV2Q9Y5S1 764 aa22.73■■□□□ 1.23
CHD3-204ENST00000439235 TRIM49BA6NDI0 452 aa22.72■■□□□ 1.23
CHD3-204ENST00000439235 INO80B-WBP1J3KQ70 363 aa22.72■■□□□ 1.23
CHD3-204ENST00000439235 PRKCBP05771 671 aa22.72■■□□□ 1.23
CHD3-204ENST00000439235 HOXD13P35453 343 aa22.72■■□□□ 1.23
CHD3-204ENST00000439235 KCNA1Q09470 495 aa22.72■■□□□ 1.23
CHD3-204ENST00000439235 TMEM62Q0P6H9 643 aa22.72■■□□□ 1.23
CHD3-204ENST00000439235 EDRF1Q3B7T1 1238 aa22.72■■□□□ 1.23
CHD3-204ENST00000439235 ZCWPW2Q504Y3 356 aa22.72■■□□□ 1.23
CHD3-204ENST00000439235 C1orf53Q5VUE5 145 aa22.72■■□□□ 1.23
CHD3-204ENST00000439235 SPATA1Q5VX52 437 aa22.72■■□□□ 1.23
CHD3-204ENST00000439235 ANKRD40Q6AI12 368 aa22.72■■□□□ 1.23
CHD3-204ENST00000439235 SLC39A5Q6ZMH5 540 aa22.72■■□□□ 1.23
CHD3-204ENST00000439235 TAS1R3Q7RTX0 852 aa22.72■■□□□ 1.23
CHD3-204ENST00000439235 LUZP1Q86V48 1076 aa22.72■■□□□ 1.23
CHD3-204ENST00000439235 DHX40Q8IX18 779 aaKnown RBP22.72■■□□□ 1.23
CHD3-204ENST00000439235 FAM126BQ8IXS8 530 aa22.72■■□□□ 1.23
CHD3-204ENST00000439235 CCDC155Q8N6L0 562 aa22.72■■□□□ 1.23
CHD3-204ENST00000439235 BICD1Q96G01 975 aa22.72■■□□□ 1.23
CHD3-204ENST00000439235 TRPV6Q9H1D0 765 aa22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms