RNA–Protein interactions for RNA: ENST00000436675.5

HDAC8-213, Transcript of histone deacetylase 8, humanhuman

TSL 5

Gene HDAC8, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-213ENST00000436675 PFKFB3Q16875 520 aaPredicted RBP16.7■□□□□ 0.26
HDAC8-213ENST00000436675 MTERF2Q49AM1 385 aa16.7■□□□□ 0.26
HDAC8-213ENST00000436675 GLB1LQ6UWU2 654 aa16.7■□□□□ 0.26
HDAC8-213ENST00000436675 PPFIBP1Q86W92 1011 aa16.7■□□□□ 0.26
HDAC8-213ENST00000436675 ZNF280BQ86YH2 543 aa16.7■□□□□ 0.26
HDAC8-213ENST00000436675 REXO1Q8N1G1 1221 aaKnown RBP16.7■□□□□ 0.26
HDAC8-213ENST00000436675 RIN2Q8WYP3 895 aaPredicted RBP16.7■□□□□ 0.26
HDAC8-213ENST00000436675 SEPT9Q9UHD8 586 aaPredicted RBP16.7■□□□□ 0.26
HDAC8-213ENST00000436675 R4GN57 208 aa16.7■□□□□ 0.26
HDAC8-213ENST00000436675 NCOR2Q9Y618 2525 aa16.69■□□□□ 0.26
HDAC8-213ENST00000436675 C2CD2LO14523 706 aa16.69■□□□□ 0.26
HDAC8-213ENST00000436675 OFD1O75665 1012 aa16.69■□□□□ 0.26
HDAC8-213ENST00000436675 CNPP09543 421 aaKnown RBP16.69■□□□□ 0.26
HDAC8-213ENST00000436675 CLCN4P51793 760 aa16.69■□□□□ 0.26
HDAC8-213ENST00000436675 EXOSC10Q01780 885 aaKnown RBP16.69■□□□□ 0.26
HDAC8-213ENST00000436675 LETM2Q2VYF4 491 aa16.69■□□□□ 0.26
HDAC8-213ENST00000436675 KIAA2013Q8IYS2 634 aa16.69■□□□□ 0.26
HDAC8-213ENST00000436675 ZNF710Q8N1W2 664 aa16.69■□□□□ 0.26
HDAC8-213ENST00000436675 EMILIN2Q9BXX0 1053 aa16.69■□□□□ 0.26
HDAC8-213ENST00000436675 C6orf50Q9HD87 102 aa16.69■□□□□ 0.26
HDAC8-213ENST00000436675 CHST12Q9NRB3 414 aa16.69■□□□□ 0.26
HDAC8-213ENST00000436675 CA14Q9ULX7 337 aa16.69■□□□□ 0.26
HDAC8-213ENST00000436675 MSH4O15457 936 aa16.68■□□□□ 0.26
HDAC8-213ENST00000436675 N4BP1O75113 896 aaKnown RBP16.68■□□□□ 0.26
HDAC8-213ENST00000436675 SFPQP23246 707 aaKnown RBP eCLIP16.68■□□□□ 0.26
HDAC8-213ENST00000436675 GBP2P32456 591 aaPredicted RBP16.68■□□□□ 0.26
HDAC8-213ENST00000436675 SPECC1Q5M775 1068 aa16.68■□□□□ 0.26
HDAC8-213ENST00000436675 KSR1Q8IVT5 923 aa16.68■□□□□ 0.26
HDAC8-213ENST00000436675 LENG9Q96B70 501 aa16.68■□□□□ 0.26
HDAC8-213ENST00000436675 RMDN1Q96DB5 314 aa16.68■□□□□ 0.26
HDAC8-213ENST00000436675 ZMYND12Q9H0C1 365 aa16.68■□□□□ 0.26
HDAC8-213ENST00000436675 UNC45AQ9H3U1 944 aa16.68■□□□□ 0.26
HDAC8-213ENST00000436675 FAM105AQ9NUU6 356 aa16.68■□□□□ 0.26
HDAC8-213ENST00000436675 DOCK8Q8NF50 2099 aa16.68■□□□□ 0.26
HDAC8-213ENST00000436675 MED19A0JLT2 244 aaPredicted RBP16.67■□□□□ 0.26
HDAC8-213ENST00000436675 KRBA1A5PL33 1030 aa16.67■□□□□ 0.26
HDAC8-213ENST00000436675 GAS7O60861 476 aa16.67■□□□□ 0.26
HDAC8-213ENST00000436675 DDHD2O94830 711 aa16.67■□□□□ 0.26
HDAC8-213ENST00000436675 LMNAP02545 664 aaKnown RBP16.67■□□□□ 0.26
HDAC8-213ENST00000436675 AFF1P51825 1210 aaKnown RBP16.67■□□□□ 0.26
HDAC8-213ENST00000436675 TARBP2Q15633 366 aaKnown RBP16.67■□□□□ 0.26
HDAC8-213ENST00000436675 ADCK5Q3MIX3 580 aa16.67■□□□□ 0.26
HDAC8-213ENST00000436675 DHX32Q7L7V1 743 aaKnown RBP16.67■□□□□ 0.26
HDAC8-213ENST00000436675 CATSPER4Q7RTX7 472 aa16.67■□□□□ 0.26
HDAC8-213ENST00000436675 RHPN2Q8IUC4 686 aa16.67■□□□□ 0.26
HDAC8-213ENST00000436675 ST13P5Q8NFI4 369 aaPredicted RBP16.67■□□□□ 0.26
HDAC8-213ENST00000436675 MAN1C1Q9NR34 630 aa16.67■□□□□ 0.26
HDAC8-213ENST00000436675 SUCLA2Q9P2R7 463 aaPredicted RBP16.67■□□□□ 0.26
HDAC8-213ENST00000436675 OTOGLQ3ZCN5 2332 aa16.67■□□□□ 0.26
HDAC8-213ENST00000436675 CACNA1IQ9P0X4 2223 aa16.66■□□□□ 0.26
HDAC8-213ENST00000436675 ESYT2A0FGR8 921 aa16.66■□□□□ 0.26
HDAC8-213ENST00000436675 SKIP12755 728 aa16.66■□□□□ 0.26
HDAC8-213ENST00000436675 CIITAP33076 1130 aa16.66■□□□□ 0.26
HDAC8-213ENST00000436675 DNM2P50570 870 aa16.66■□□□□ 0.26
HDAC8-213ENST00000436675 AK2P54819 239 aa16.66■□□□□ 0.26
HDAC8-213ENST00000436675 RNF20Q5VTR2 975 aa16.66■□□□□ 0.26
HDAC8-213ENST00000436675 LRCH2Q5VUJ6 765 aa16.66■□□□□ 0.26
HDAC8-213ENST00000436675 URGCPQ8TCY9 931 aa16.66■□□□□ 0.26
HDAC8-213ENST00000436675 CCDC136Q96JN2 1154 aa16.66■□□□□ 0.26
HDAC8-213ENST00000436675 NLRP4Q96MN2 994 aa16.66■□□□□ 0.26
HDAC8-213ENST00000436675 HINFPQ9BQA5 517 aa16.66■□□□□ 0.26
HDAC8-213ENST00000436675 TEKT3Q9BXF9 490 aa16.66■□□□□ 0.26
HDAC8-213ENST00000436675 MRPL17Q9NRX2 175 aaKnown RBP16.66■□□□□ 0.26
HDAC8-213ENST00000436675 IGSF9Q9P2J2 1179 aa16.66■□□□□ 0.26
HDAC8-213ENST00000436675 PCDHB2Q9Y5E7 798 aa16.66■□□□□ 0.26
HDAC8-213ENST00000436675 CCDC195A0A1B0GUA6 201 aa16.65■□□□□ 0.26
HDAC8-213ENST00000436675 DDX11L8A8MPP1 907 aa16.65■□□□□ 0.26
HDAC8-213ENST00000436675 EDIL3O43854 480 aa16.65■□□□□ 0.26
HDAC8-213ENST00000436675 POMCP01189 267 aa16.65■□□□□ 0.26
HDAC8-213ENST00000436675 DCNP07585 359 aaKnown RBP16.65■□□□□ 0.26
HDAC8-213ENST00000436675 SPATA31D3P0C874 917 aa16.65■□□□□ 0.26
HDAC8-213ENST00000436675 CPA1P15085 419 aa16.65■□□□□ 0.26
HDAC8-213ENST00000436675 JAK3P52333 1124 aa16.65■□□□□ 0.26
HDAC8-213ENST00000436675 FGD1P98174 961 aa16.65■□□□□ 0.26
HDAC8-213ENST00000436675 AGMOQ6ZNB7 445 aa16.65■□□□□ 0.26
HDAC8-213ENST00000436675 SPATA31D4Q6ZUB0 917 aa16.65■□□□□ 0.26
HDAC8-213ENST00000436675 TAS1R1Q7RTX1 841 aa16.65■□□□□ 0.26
HDAC8-213ENST00000436675 MIER3Q7Z3K6 550 aa16.65■□□□□ 0.26
HDAC8-213ENST00000436675 RASEFQ8IZ41 740 aa16.65■□□□□ 0.26
HDAC8-213ENST00000436675 CCDC12Q8WUD4 166 aaPredicted RBP16.65■□□□□ 0.26
HDAC8-213ENST00000436675 PHKBQ93100 1093 aa16.65■□□□□ 0.26
HDAC8-213ENST00000436675 PGBD4Q96DM1 585 aa16.65■□□□□ 0.26
HDAC8-213ENST00000436675 FAM193BQ96PV7 902 aaPredicted RBP16.65■□□□□ 0.26
HDAC8-213ENST00000436675 MYADMQ96S97 322 aa16.65■□□□□ 0.26
HDAC8-213ENST00000436675 TRAIPQ9BWF2 469 aa16.65■□□□□ 0.26
HDAC8-213ENST00000436675 INO80BQ9C086 356 aaPredicted RBP16.65■□□□□ 0.26
HDAC8-213ENST00000436675 TBC1D17Q9HA65 648 aa16.65■□□□□ 0.26
HDAC8-213ENST00000436675 FAN1Q9Y2M0 1017 aa16.65■□□□□ 0.26
HDAC8-213ENST00000436675 PRG3Q9Y2Y8 225 aaPredicted RBP16.65■□□□□ 0.26
HDAC8-213ENST00000436675 CACNA1BQ00975 2339 aa16.65■□□□□ 0.26
HDAC8-213ENST00000436675 SPTBN2O15020 2390 aa16.65■□□□□ 0.26
HDAC8-213ENST00000436675 DOCK6Q96HP0 2047 aa16.65■□□□□ 0.26
HDAC8-213ENST00000436675 CARNS1A5YM72 827 aa16.64■□□□□ 0.25
HDAC8-213ENST00000436675 INPPL1O15357 1258 aa16.64■□□□□ 0.25
HDAC8-213ENST00000436675 LILRB3O75022 631 aa16.64■□□□□ 0.25
HDAC8-213ENST00000436675 ZNF623O75123 536 aa16.64■□□□□ 0.25
HDAC8-213ENST00000436675 RFPL2O75678 378 aa16.64■□□□□ 0.25
HDAC8-213ENST00000436675 ALDH2P05091 517 aa16.64■□□□□ 0.25
HDAC8-213ENST00000436675 GNA11P29992 359 aa16.64■□□□□ 0.25
HDAC8-213ENST00000436675 SFNP31947 248 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms