RNA–Protein interactions for RNA: ENST00000434472.6

CD44-210, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,634 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-210ENST00000434472 HSPA6P17066 643 aa11.29□□□□□ -0.6
CD44-210ENST00000434472 RXRBP28702 533 aa11.29□□□□□ -0.6
CD44-210ENST00000434472 IRAK1P51617 712 aa11.29□□□□□ -0.6
CD44-210ENST00000434472 NCKAP1LP55160 1127 aa11.29□□□□□ -0.6
CD44-210ENST00000434472 RNASE9P60153 205 aaKnown RBP11.29□□□□□ -0.6
CD44-210ENST00000434472 PSMC5P62195 406 aa11.29□□□□□ -0.6
CD44-210ENST00000434472 KRT76Q01546 638 aa11.29□□□□□ -0.6
CD44-210ENST00000434472 MTMR1Q13613 665 aa11.29□□□□□ -0.6
CD44-210ENST00000434472 TNFAIP1Q13829 316 aa11.29□□□□□ -0.6
CD44-210ENST00000434472 HLTFQ14527 1009 aaKnown RBP eCLIP11.29□□□□□ -0.6
CD44-210ENST00000434472 ARHGAP44Q17R89 818 aa11.29□□□□□ -0.6
CD44-210ENST00000434472 EPC2Q52LR7 807 aa11.29□□□□□ -0.6
CD44-210ENST00000434472 EMC10Q5UCC4 262 aa11.29□□□□□ -0.6
CD44-210ENST00000434472 OLIG1Q8TAK6 271 aa11.29□□□□□ -0.6
CD44-210ENST00000434472 LMO3Q8TAP4 145 aa11.29□□□□□ -0.6
CD44-210ENST00000434472 SYTL5Q8TDW5 730 aaPredicted RBP11.29□□□□□ -0.6
CD44-210ENST00000434472 ZBTB9Q96C00 473 aa11.29□□□□□ -0.6
CD44-210ENST00000434472 CARD9Q9H257 536 aa11.29□□□□□ -0.6
CD44-210ENST00000434472 IKZF4Q9H2S9 585 aa11.29□□□□□ -0.6
CD44-210ENST00000434472 SLC38A10Q9HBR0 1119 aa11.29□□□□□ -0.6
CD44-210ENST00000434472 ZNF277Q9NRM2 450 aaPredicted RBP11.29□□□□□ -0.6
CD44-210ENST00000434472 ZBTB12Q9Y330 459 aaPredicted RBP11.29□□□□□ -0.6
CD44-210ENST00000434472 SAMM50Q9Y512 469 aa11.29□□□□□ -0.6
CD44-210ENST00000434472 EMSYQ7Z589 1322 aa11.29□□□□□ -0.6
CD44-210ENST00000434472 HMGB1P1B2RPK0 211 aaPredicted RBP11.28□□□□□ -0.6
CD44-210ENST00000434472 DDX3YO15523 660 aaKnown RBP11.28□□□□□ -0.6
CD44-210ENST00000434472 FAM153BP0C7A2 387 aa11.28□□□□□ -0.6
CD44-210ENST00000434472 ALAS1P13196 640 aa11.28□□□□□ -0.6
CD44-210ENST00000434472 YWHABP31946 246 aaKnown RBP11.28□□□□□ -0.6
CD44-210ENST00000434472 GUCY2FP51841 1108 aa11.28□□□□□ -0.6
CD44-210ENST00000434472 ERVK-9P63128 1117 aa11.28□□□□□ -0.6
CD44-210ENST00000434472 ITGB3BPQ13352 177 aaPredicted RBP11.28□□□□□ -0.6
CD44-210ENST00000434472 PLS1Q14651 629 aa11.28□□□□□ -0.6
CD44-210ENST00000434472 FAM153CQ494X1 144 aa11.28□□□□□ -0.6
CD44-210ENST00000434472 TTMPQ5BVD1 217 aa11.28□□□□□ -0.6
CD44-210ENST00000434472 SPDYCQ5MJ68 293 aa11.28□□□□□ -0.6
CD44-210ENST00000434472 PHLDB3Q6NSJ2 640 aa11.28□□□□□ -0.6
CD44-210ENST00000434472 C11orf63Q6NUN7 778 aa11.28□□□□□ -0.6
CD44-210ENST00000434472 KDM7AQ6ZMT4 941 aa11.28□□□□□ -0.6
CD44-210ENST00000434472 HAUS6Q7Z4H7 955 aa11.28□□□□□ -0.6
CD44-210ENST00000434472 SRLQ86TD4 932 aa11.28□□□□□ -0.6
CD44-210ENST00000434472 ZFP91Q96JP5 570 aaPredicted RBP11.28□□□□□ -0.6
CD44-210ENST00000434472 GLIS2Q9BZE0 524 aaPredicted RBP11.28□□□□□ -0.6
CD44-210ENST00000434472 RAB17Q9H0T7 212 aa11.28□□□□□ -0.6
CD44-210ENST00000434472 UBE2TQ9NPD8 197 aaPredicted RBP11.28□□□□□ -0.6
CD44-210ENST00000434472 SEPT11Q9NVA2 429 aaKnown RBP11.28□□□□□ -0.6
CD44-210ENST00000434472 HSPBP1Q9NZL4 362 aa11.28□□□□□ -0.6
CD44-210ENST00000434472 COL20A1Q9P218 1284 aa11.28□□□□□ -0.6
CD44-210ENST00000434472 FAM153AQ9UHL3 310 aa11.28□□□□□ -0.6
CD44-210ENST00000434472 RRP15Q9Y3B9 282 aaKnown RBP11.28□□□□□ -0.6
CD44-210ENST00000434472 ESYT3A0FGR9 886 aa11.27□□□□□ -0.6
CD44-210ENST00000434472 FAM187AA6NFU0 413 aa11.27□□□□□ -0.6
CD44-210ENST00000434472 PHF20L1A8MW92 1017 aa11.27□□□□□ -0.6
CD44-210ENST00000434472 WDR64B1ANS9 1081 aa11.27□□□□□ -0.6
CD44-210ENST00000434472 FOXN3O00409 490 aaPredicted RBP11.27□□□□□ -0.6
CD44-210ENST00000434472 NFIBO00712 420 aa11.27□□□□□ -0.6
CD44-210ENST00000434472 EIF3HO15372 352 aaKnown RBP eCLIP11.27□□□□□ -0.6
CD44-210ENST00000434472 RTN2O75298 545 aa11.27□□□□□ -0.6
CD44-210ENST00000434472 ERLIN2O94905 339 aa11.27□□□□□ -0.6
CD44-210ENST00000434472 ABCD1P33897 745 aa11.27□□□□□ -0.6
CD44-210ENST00000434472 SMTNP53814 917 aa11.27□□□□□ -0.6
CD44-210ENST00000434472 MFAP3P55082 362 aa11.27□□□□□ -0.6
CD44-210ENST00000434472 GNGT1P63211 74 aa11.27□□□□□ -0.6
CD44-210ENST00000434472 ENPEPQ07075 957 aa11.27□□□□□ -0.6
CD44-210ENST00000434472 DNAJC21Q5F1R6 531 aaKnown RBP11.27□□□□□ -0.6
CD44-210ENST00000434472 CIAPIN1Q6FI81 312 aa11.27□□□□□ -0.6
CD44-210ENST00000434472 USP37Q86T82 979 aa11.27□□□□□ -0.6
CD44-210ENST00000434472 ARFGAP2Q8N6H7 521 aa11.27□□□□□ -0.6
CD44-210ENST00000434472 UBL4BQ8N7F7 174 aa11.27□□□□□ -0.6
CD44-210ENST00000434472 RDH13Q8NBN7 331 aa11.27□□□□□ -0.6
CD44-210ENST00000434472 ARL8AQ96BM9 186 aa11.27□□□□□ -0.6
CD44-210ENST00000434472 ATP6V1G3Q96LB4 118 aa11.27□□□□□ -0.6
CD44-210ENST00000434472 AP1M1Q9BXS5 423 aa11.27□□□□□ -0.6
CD44-210ENST00000434472 PCIF1Q9H4Z3 704 aa11.27□□□□□ -0.6
CD44-210ENST00000434472 RAVER2Q9HCJ3 691 aaKnown RBP11.27□□□□□ -0.6
CD44-210ENST00000434472 PKD2L1Q9P0L9 805 aa11.27□□□□□ -0.6
CD44-210ENST00000434472 RSPH14Q9UHP6 348 aa11.27□□□□□ -0.6
CD44-210ENST00000434472 PPP1R9AQ9ULJ8 1098 aa11.27□□□□□ -0.6
CD44-210ENST00000434472 UTP11Q9Y3A2 253 aaKnown RBP11.27□□□□□ -0.6
CD44-210ENST00000434472 ZSCAN5CA6NGD5 496 aaPredicted RBP11.27□□□□□ -0.61
CD44-210ENST00000434472 SRRM3A6NNA2 597 aaPredicted RBP11.27□□□□□ -0.61
CD44-210ENST00000434472 TULP1O00294 542 aaPredicted RBP11.27□□□□□ -0.61
CD44-210ENST00000434472 WNT10BO00744 389 aa11.27□□□□□ -0.61
CD44-210ENST00000434472 MAFGO15525 162 aa11.27□□□□□ -0.61
CD44-210ENST00000434472 CTNND1O60716 968 aaKnown RBP11.27□□□□□ -0.61
CD44-210ENST00000434472 MTA2O94776 668 aa11.27□□□□□ -0.61
CD44-210ENST00000434472 GGPS1O95749 300 aa11.27□□□□□ -0.61
CD44-210ENST00000434472 GZMAP12544 262 aa11.27□□□□□ -0.61
CD44-210ENST00000434472 ABCB4P21439 1286 aa11.27□□□□□ -0.61
CD44-210ENST00000434472 MXI1P50539 228 aa11.27□□□□□ -0.61
CD44-210ENST00000434472 GPC5P78333 572 aa11.27□□□□□ -0.61
CD44-210ENST00000434472 MRPS9P82933 396 aaKnown RBP11.27□□□□□ -0.61
CD44-210ENST00000434472 RASA3Q14644 834 aa11.27□□□□□ -0.61
CD44-210ENST00000434472 PGM5Q15124 567 aa11.27□□□□□ -0.61
CD44-210ENST00000434472 RUFY4Q6ZNE9 571 aa11.27□□□□□ -0.61
CD44-210ENST00000434472 OTUD6AQ7L8S5 288 aa11.27□□□□□ -0.61
CD44-210ENST00000434472 NLRX1Q86UT6 975 aa11.27□□□□□ -0.61
CD44-210ENST00000434472 EFCAB13Q8IY85 973 aa11.27□□□□□ -0.61
CD44-210ENST00000434472 IL31RAQ8NI17 732 aa11.27□□□□□ -0.61
CD44-210ENST00000434472 PIK3R5Q8WYR1 880 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms