RNA–Protein interactions for RNA: ENST00000433709.6

HDAC9-213, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 602 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-213ENST00000433709 TXNDC5Q8NBS9 432 aaKnown RBP7.57□□□□□ -1.2
HDAC9-213ENST00000433709 FEZF2Q8TBJ5 459 aa7.57□□□□□ -1.2
HDAC9-213ENST00000433709 FOXRED1Q96CU9 486 aaPredicted RBP7.57□□□□□ -1.2
HDAC9-213ENST00000433709 GPR101Q96P66 508 aaPredicted RBP7.57□□□□□ -1.2
HDAC9-213ENST00000433709 PUS7Q96PZ0 661 aaKnown RBP7.57□□□□□ -1.2
HDAC9-213ENST00000433709 L2HGDHQ9H9P8 463 aa7.57□□□□□ -1.2
HDAC9-213ENST00000433709 LUC7LQ9NQ29 371 aaKnown RBP7.57□□□□□ -1.2
HDAC9-213ENST00000433709 NWD2Q9ULI1 1742 aa7.57□□□□□ -1.2
HDAC9-213ENST00000433709 SBNO2Q9Y2G9 1366 aa7.57□□□□□ -1.2
HDAC9-213ENST00000433709 ARHGEF28Q8N1W1 1705 aaKnown RBP7.56□□□□□ -1.2
HDAC9-213ENST00000433709 ZNF662Q6ZS27 426 aa7.56□□□□□ -1.2
HDAC9-213ENST00000433709 KRT27Q7Z3Y8 459 aa7.56□□□□□ -1.2
HDAC9-213ENST00000433709 STRA8Q7Z7C7 330 aa7.56□□□□□ -1.2
HDAC9-213ENST00000433709 RTN4RL1Q86UN2 441 aaPredicted RBP7.56□□□□□ -1.2
HDAC9-213ENST00000433709 KCNH5Q8NCM2 988 aa7.56□□□□□ -1.2
HDAC9-213ENST00000433709 NUDT10Q8NFP7 164 aa7.56□□□□□ -1.2
HDAC9-213ENST00000433709 OR2W6PQ8NHA6 318 aa7.56□□□□□ -1.2
HDAC9-213ENST00000433709 NUDT11Q96G61 164 aa7.56□□□□□ -1.2
HDAC9-213ENST00000433709 YTHDC1Q96MU7 727 aaKnown RBP7.56□□□□□ -1.2
HDAC9-213ENST00000433709 TOMM22Q9NS69 142 aa7.56□□□□□ -1.2
HDAC9-213ENST00000433709 ASB1Q9Y576 335 aa7.56□□□□□ -1.2
HDAC9-213ENST00000433709 SPO11Q9Y5K1 396 aa7.56□□□□□ -1.2
HDAC9-213ENST00000433709 RALGAPBQ86X10 1494 aa7.55□□□□□ -1.2
HDAC9-213ENST00000433709 BLMP54132 1417 aaPredicted RBP7.55□□□□□ -1.2
HDAC9-213ENST00000433709 PPIP5K1Q6PFW1 1433 aa7.55□□□□□ -1.2
HDAC9-213ENST00000433709 CYP1A1P04798 512 aaPredicted RBP7.55□□□□□ -1.2
HDAC9-213ENST00000433709 CYP17A1P05093 508 aa7.55□□□□□ -1.2
HDAC9-213ENST00000433709 ADCYAP1R1P41586 468 aa7.55□□□□□ -1.2
HDAC9-213ENST00000433709 ECE1P42892 770 aa7.55□□□□□ -1.2
HDAC9-213ENST00000433709 FNTBP49356 437 aa7.55□□□□□ -1.2
HDAC9-213ENST00000433709 IL13RA1P78552 427 aa7.55□□□□□ -1.2
HDAC9-213ENST00000433709 SART3Q15020 963 aaKnown RBP7.55□□□□□ -1.2
HDAC9-213ENST00000433709 NT5DC1Q5TFE4 455 aa7.55□□□□□ -1.2
HDAC9-213ENST00000433709 DDX46Q7L014 1031 aaKnown RBP7.55□□□□□ -1.2
HDAC9-213ENST00000433709 SP8Q8IXZ3 490 aa7.55□□□□□ -1.2
HDAC9-213ENST00000433709 ZDHHC14Q8IZN3 488 aa7.55□□□□□ -1.2
HDAC9-213ENST00000433709 CHAC2Q8WUX2 184 aa7.55□□□□□ -1.2
HDAC9-213ENST00000433709 C16orf92Q96LL3 132 aa7.55□□□□□ -1.2
HDAC9-213ENST00000433709 ZCCHC4Q9H5U6 513 aa7.55□□□□□ -1.2
HDAC9-213ENST00000433709 CAAP1Q9H8G2 361 aa7.55□□□□□ -1.2
HDAC9-213ENST00000433709 SPTLC3Q9NUV7 552 aa7.55□□□□□ -1.2
HDAC9-213ENST00000433709 FTSJ1Q9UET6 329 aa7.55□□□□□ -1.2
HDAC9-213ENST00000433709 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.55□□□□□ -1.2
HDAC9-213ENST00000433709 THRAP3Q9Y2W1 955 aaKnown RBP7.55□□□□□ -1.2
HDAC9-213ENST00000433709 COL14A1Q05707 1796 aaKnown RBP7.55□□□□□ -1.2
HDAC9-213ENST00000433709 TTC21AQ8NDW8 1320 aa7.54□□□□□ -1.2
HDAC9-213ENST00000433709 RGPD8O14715 1765 aaPredicted RBP7.54□□□□□ -1.2
HDAC9-213ENST00000433709 TGM5O43548 720 aa7.54□□□□□ -1.2
HDAC9-213ENST00000433709 NOBOXO60393 691 aa7.54□□□□□ -1.2
HDAC9-213ENST00000433709 SASH1O94885 1247 aa7.54□□□□□ -1.2
HDAC9-213ENST00000433709 KLHL18O94889 574 aa7.54□□□□□ -1.2
HDAC9-213ENST00000433709 KPNA1P52294 538 aaPredicted RBP7.54□□□□□ -1.2
HDAC9-213ENST00000433709 IL2P60568 153 aa7.54□□□□□ -1.2
HDAC9-213ENST00000433709 FAM26FQ5R3K3 315 aa7.54□□□□□ -1.2
HDAC9-213ENST00000433709 ESRP1Q6NXG1 681 aaKnown RBP7.54□□□□□ -1.2
HDAC9-213ENST00000433709 SIN3AQ96ST3 1273 aa7.54□□□□□ -1.2
HDAC9-213ENST00000433709 BTBD2Q9BX70 525 aa7.54□□□□□ -1.2
HDAC9-213ENST00000433709 CARD11Q9BXL7 1154 aa7.54□□□□□ -1.2
HDAC9-213ENST00000433709 TMEM168Q9H0V1 697 aa7.54□□□□□ -1.2
HDAC9-213ENST00000433709 PARD6AQ9NPB6 346 aa7.54□□□□□ -1.2
HDAC9-213ENST00000433709 CPDO75976 1380 aa7.54□□□□□ -1.2
HDAC9-213ENST00000433709 ADAMTS20P59510 1910 aa7.54□□□□□ -1.2
HDAC9-213ENST00000433709 SPATA31A5Q5VU36 1347 aa7.53□□□□□ -1.2
HDAC9-213ENST00000433709 SPATA31A7Q8IWB4 1347 aa7.53□□□□□ -1.2
HDAC9-213ENST00000433709 CLSPNQ9HAW4 1339 aa7.53□□□□□ -1.2
HDAC9-213ENST00000433709 OTOL1A6NHN0 477 aaPredicted RBP7.53□□□□□ -1.2
HDAC9-213ENST00000433709 H0Y858 1186 aa7.53□□□□□ -1.2
HDAC9-213ENST00000433709 FKBP9O95302 570 aa7.53□□□□□ -1.2
HDAC9-213ENST00000433709 GCP02774 474 aa7.53□□□□□ -1.2
HDAC9-213ENST00000433709 CHGBP05060 677 aa7.53□□□□□ -1.2
HDAC9-213ENST00000433709 STRN3Q13033 797 aa7.53□□□□□ -1.2
HDAC9-213ENST00000433709 DHCR24Q15392 516 aa7.53□□□□□ -1.2
HDAC9-213ENST00000433709 WDR72Q3MJ13 1102 aa7.53□□□□□ -1.2
HDAC9-213ENST00000433709 DPP8Q6V1X1 898 aaPredicted RBP7.53□□□□□ -1.2
HDAC9-213ENST00000433709 FKBP9P1Q75LS8 142 aa7.53□□□□□ -1.2
HDAC9-213ENST00000433709 HDGFL2Q7Z4V5 671 aaPredicted RBP7.53□□□□□ -1.2
HDAC9-213ENST00000433709 EFHBQ8N7U6 833 aa7.53□□□□□ -1.2
HDAC9-213ENST00000433709 XYLT2Q9H1B5 865 aa7.53□□□□□ -1.2
HDAC9-213ENST00000433709 TERF2IPQ9NYB0 399 aa7.53□□□□□ -1.2
HDAC9-213ENST00000433709 ALS2Q96Q42 1657 aa7.53□□□□□ -1.2
HDAC9-213ENST00000433709 TRPM3Q9HCF6 1732 aaPredicted RBP7.52□□□□□ -1.2
HDAC9-213ENST00000433709 KIAA0232Q92628 1395 aa7.52□□□□□ -1.21
HDAC9-213ENST00000433709 NINLQ9Y2I6 1382 aa7.52□□□□□ -1.21
HDAC9-213ENST00000433709 NEMP1O14524 444 aa7.52□□□□□ -1.21
HDAC9-213ENST00000433709 VIL1P09327 827 aaKnown RBP7.52□□□□□ -1.21
HDAC9-213ENST00000433709 SOX5P35711 763 aa7.52□□□□□ -1.21
HDAC9-213ENST00000433709 ID4P47928 161 aa7.52□□□□□ -1.21
HDAC9-213ENST00000433709 LSSP48449 732 aa7.52□□□□□ -1.21
HDAC9-213ENST00000433709 SMAD3P84022 425 aaKnown RBP7.52□□□□□ -1.21
HDAC9-213ENST00000433709 CD83Q01151 205 aa7.52□□□□□ -1.21
HDAC9-213ENST00000433709 ALDH6A1Q02252 535 aaKnown RBP7.52□□□□□ -1.21
HDAC9-213ENST00000433709 EPHA7Q15375 998 aa7.52□□□□□ -1.21
HDAC9-213ENST00000433709 STILQ15468 1287 aa7.52□□□□□ -1.21
HDAC9-213ENST00000433709 RTF1Q92541 710 aaKnown RBP7.52□□□□□ -1.21
HDAC9-213ENST00000433709 OR10A5Q9H207 317 aa7.52□□□□□ -1.21
HDAC9-213ENST00000433709 ZMAT4Q9H898 229 aa7.52□□□□□ -1.21
HDAC9-213ENST00000433709 PRKAB1Q9Y478 270 aa7.52□□□□□ -1.21
HDAC9-213ENST00000433709 USP6P35125 1406 aa7.52□□□□□ -1.21
HDAC9-213ENST00000433709 USP19O94966 1318 aa7.52□□□□□ -1.21
HDAC9-213ENST00000433709 MROH6A6NGR9 719 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms