RNA–Protein interactions for RNA: ENST00000431611.5

CSNK1E-208, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5

Gene CSNK1E, Length 814 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-208ENST00000431611 SLC7A3Q8WY07 619 aa16.96■□□□□ 0.31
CSNK1E-208ENST00000431611 PHF20Q9BVI0 1012 aa16.96■□□□□ 0.31
CSNK1E-208ENST00000431611 ADAM7Q9H2U9 754 aa16.96■□□□□ 0.31
CSNK1E-208ENST00000431611 KCNMB3Q9NPA1 279 aa16.96■□□□□ 0.31
CSNK1E-208ENST00000431611 VAV3Q9UKW4 847 aa16.96■□□□□ 0.31
CSNK1E-208ENST00000431611 INPP5FQ9Y2H2 1132 aa16.96■□□□□ 0.31
CSNK1E-208ENST00000431611 MARCH6O60337 910 aa16.95■□□□□ 0.3
CSNK1E-208ENST00000431611 P4HBP07237 508 aaKnown RBP16.95■□□□□ 0.3
CSNK1E-208ENST00000431611 GCFC2P16383 781 aaKnown RBP16.95■□□□□ 0.3
CSNK1E-208ENST00000431611 SP100P23497 879 aaPredicted RBP16.95■□□□□ 0.3
CSNK1E-208ENST00000431611 RNASELQ05823 741 aaKnown RBP16.95■□□□□ 0.3
CSNK1E-208ENST00000431611 ITIH3Q06033 890 aa16.95■□□□□ 0.3
CSNK1E-208ENST00000431611 SCRN1Q12765 414 aa16.95■□□□□ 0.3
CSNK1E-208ENST00000431611 ZBTB33Q86T24 672 aa16.95■□□□□ 0.3
CSNK1E-208ENST00000431611 TMEM173Q86WV6 379 aaPredicted RBP16.95■□□□□ 0.3
CSNK1E-208ENST00000431611 EXOC8Q8IYI6 725 aa16.95■□□□□ 0.3
CSNK1E-208ENST00000431611 FBXL6Q8N531 539 aa16.95■□□□□ 0.3
CSNK1E-208ENST00000431611 PGBD4Q96DM1 585 aa16.95■□□□□ 0.3
CSNK1E-208ENST00000431611 CEP170P1Q96L14 293 aa16.95■□□□□ 0.3
CSNK1E-208ENST00000431611 NECTIN4Q96NY8 510 aa16.95■□□□□ 0.3
CSNK1E-208ENST00000431611 ZBP1Q9H171 429 aa16.95■□□□□ 0.3
CSNK1E-208ENST00000431611 NRDE2Q9H7Z3 1164 aa16.95■□□□□ 0.3
CSNK1E-208ENST00000431611 IFT122Q9HBG6 1241 aa16.95■□□□□ 0.3
CSNK1E-208ENST00000431611 TSHZ2Q9NRE2 1034 aa16.95■□□□□ 0.3
CSNK1E-208ENST00000431611 TBC1D13Q9NVG8 400 aa16.95■□□□□ 0.3
CSNK1E-208ENST00000431611 CDH22Q9UJ99 828 aa16.95■□□□□ 0.3
CSNK1E-208ENST00000431611 NR2E1Q9Y466 385 aa16.95■□□□□ 0.3
CSNK1E-208ENST00000431611 COL4A3BPQ9Y5P4 624 aa16.95■□□□□ 0.3
CSNK1E-208ENST00000431611 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.94■□□□□ 0.3
CSNK1E-208ENST00000431611 MEIS3P2A8K0S8 358 aa16.94■□□□□ 0.3
CSNK1E-208ENST00000431611 CCNT1O60563 726 aaKnown RBP16.94■□□□□ 0.3
CSNK1E-208ENST00000431611 OFD1O75665 1012 aa16.94■□□□□ 0.3
CSNK1E-208ENST00000431611 GALTP07902 379 aa16.94■□□□□ 0.3
CSNK1E-208ENST00000431611 POLGP54098 1239 aaPredicted RBP16.94■□□□□ 0.3
CSNK1E-208ENST00000431611 GIT2Q14161 759 aa16.94■□□□□ 0.3
CSNK1E-208ENST00000431611 IER5LQ5T953 404 aa16.94■□□□□ 0.3
CSNK1E-208ENST00000431611 DDX53Q86TM3 631 aaKnown RBP16.94■□□□□ 0.3
CSNK1E-208ENST00000431611 ZNF579Q8NAF0 562 aaKnown RBP16.94■□□□□ 0.3
CSNK1E-208ENST00000431611 PSPC1Q8WXF1 523 aaKnown RBP16.94■□□□□ 0.3
CSNK1E-208ENST00000431611 AUTS2Q8WXX7 1259 aa16.94■□□□□ 0.3
CSNK1E-208ENST00000431611 IGSF21Q96ID5 467 aa16.94■□□□□ 0.3
CSNK1E-208ENST00000431611 NAP1L4Q99733 375 aaKnown RBP16.94■□□□□ 0.3
CSNK1E-208ENST00000431611 PRRX2Q99811 253 aa16.94■□□□□ 0.3
CSNK1E-208ENST00000431611 GBP3Q9H0R5 595 aa16.94■□□□□ 0.3
CSNK1E-208ENST00000431611 GJB4Q9NTQ9 266 aa16.94■□□□□ 0.3
CSNK1E-208ENST00000431611 AGPAT5Q9NUQ2 364 aa16.94■□□□□ 0.3
CSNK1E-208ENST00000431611 WRAP73Q9P2S5 460 aaPredicted RBP16.94■□□□□ 0.3
CSNK1E-208ENST00000431611 PPME1Q9Y570 386 aa16.94■□□□□ 0.3
CSNK1E-208ENST00000431611 PCDHB2Q9Y5E7 798 aa16.94■□□□□ 0.3
CSNK1E-208ENST00000431611 STK36Q9NRP7 1315 aa16.94■□□□□ 0.3
CSNK1E-208ENST00000431611 TECTAO75443 2155 aa16.94■□□□□ 0.3
CSNK1E-208ENST00000431611 TBX3O15119 743 aa16.93■□□□□ 0.3
CSNK1E-208ENST00000431611 SRGAP2CP0DJJ0 459 aa16.93■□□□□ 0.3
CSNK1E-208ENST00000431611 CTSAP10619 480 aa16.93■□□□□ 0.3
CSNK1E-208ENST00000431611 RFC5P40937 340 aa16.93■□□□□ 0.3
CSNK1E-208ENST00000431611 EPHA7Q15375 998 aa16.93■□□□□ 0.3
CSNK1E-208ENST00000431611 PIK3AP1Q6ZUJ8 805 aa16.93■□□□□ 0.3
CSNK1E-208ENST00000431611 OTUD6AQ7L8S5 288 aa16.93■□□□□ 0.3
CSNK1E-208ENST00000431611 SRGAP1Q7Z6B7 1085 aa16.93■□□□□ 0.3
CSNK1E-208ENST00000431611 C4orf19Q8IY42 314 aa16.93■□□□□ 0.3
CSNK1E-208ENST00000431611 PRSS33Q8NF86 280 aa16.93■□□□□ 0.3
CSNK1E-208ENST00000431611 URGCPQ8TCY9 931 aa16.93■□□□□ 0.3
CSNK1E-208ENST00000431611 PRPF31Q8WWY3 499 aaKnown RBP16.93■□□□□ 0.3
CSNK1E-208ENST00000431611 TMEM143Q96AN5 459 aa16.93■□□□□ 0.3
CSNK1E-208ENST00000431611 ASIC4Q96FT7 647 aa16.93■□□□□ 0.3
CSNK1E-208ENST00000431611 RIPOR3Q96MK2 946 aa16.93■□□□□ 0.3
CSNK1E-208ENST00000431611 POMKQ9H5K3 350 aa16.93■□□□□ 0.3
CSNK1E-208ENST00000431611 DHX33Q9H6R0 707 aaKnown RBP16.93■□□□□ 0.3
CSNK1E-208ENST00000431611 DNAJB4Q9UDY4 337 aa16.93■□□□□ 0.3
CSNK1E-208ENST00000431611 IRAK3Q9Y616 596 aa16.93■□□□□ 0.3
CSNK1E-208ENST00000431611 YWHABP31946 246 aaKnown RBP16.92■□□□□ 0.3
CSNK1E-208ENST00000431611 MTHFRP42898 656 aa16.92■□□□□ 0.3
CSNK1E-208ENST00000431611 SLC11A1P49279 550 aa16.92■□□□□ 0.3
CSNK1E-208ENST00000431611 PTPN5P54829 565 aa16.92■□□□□ 0.3
CSNK1E-208ENST00000431611 RARS2Q5T160 578 aaKnown RBP16.92■□□□□ 0.3
CSNK1E-208ENST00000431611 NCAPH2Q6IBW4 605 aa16.92■□□□□ 0.3
CSNK1E-208ENST00000431611 AGMOQ6ZNB7 445 aa16.92■□□□□ 0.3
CSNK1E-208ENST00000431611 C12orf76Q8N812 135 aaPredicted RBP16.92■□□□□ 0.3
CSNK1E-208ENST00000431611 OXER1Q8TDS5 423 aa16.92■□□□□ 0.3
CSNK1E-208ENST00000431611 BCL7CQ8WUZ0 217 aaPredicted RBP16.92■□□□□ 0.3
CSNK1E-208ENST00000431611 HAS1Q92839 578 aa16.92■□□□□ 0.3
CSNK1E-208ENST00000431611 LXNQ9BS40 222 aa16.92■□□□□ 0.3
CSNK1E-208ENST00000431611 BMP2KQ9NSY1 1161 aaPredicted RBP16.92■□□□□ 0.3
CSNK1E-208ENST00000431611 DZANK1Q9NVP4 752 aa16.92■□□□□ 0.3
CSNK1E-208ENST00000431611 RGL1Q9NZL6 768 aa16.92■□□□□ 0.3
CSNK1E-208ENST00000431611 TPCN1Q9ULQ1 816 aa16.92■□□□□ 0.3
CSNK1E-208ENST00000431611 C2CD4DB7Z1M9 353 aa16.91■□□□□ 0.3
CSNK1E-208ENST00000431611 ASAP2O43150 1006 aa16.91■□□□□ 0.3
CSNK1E-208ENST00000431611 PFKFB2O60825 505 aa16.91■□□□□ 0.3
CSNK1E-208ENST00000431611 DTNBO60941 627 aa16.91■□□□□ 0.3
CSNK1E-208ENST00000431611 WEE2P0C1S8 567 aa16.91■□□□□ 0.3
CSNK1E-208ENST00000431611 EPCAMP16422 314 aa16.91■□□□□ 0.3
CSNK1E-208ENST00000431611 LAMTOR4Q0VGL1 99 aa16.91■□□□□ 0.3
CSNK1E-208ENST00000431611 ATAT1Q5SQI0 421 aa16.91■□□□□ 0.3
CSNK1E-208ENST00000431611 MRPL10Q7Z7H8 261 aaKnown RBP16.91■□□□□ 0.3
CSNK1E-208ENST00000431611 ZNF280BQ86YH2 543 aa16.91■□□□□ 0.3
CSNK1E-208ENST00000431611 POTEDQ86YR6 584 aa16.91■□□□□ 0.3
CSNK1E-208ENST00000431611 KREMEN2Q8NCW0 462 aa16.91■□□□□ 0.3
CSNK1E-208ENST00000431611 SLC22A17Q8WUG5 538 aa16.91■□□□□ 0.3
CSNK1E-208ENST00000431611 TCP11Q8WWU5 503 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms