RNA–Protein interactions for RNA: ENST00000430771.2

CHD4-202, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 527 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-202ENST00000430771 KIFC3Q9BVG8 833 aa12.13□□□□□ -0.47
CHD4-202ENST00000430771 ADAMTS10Q9H324 1103 aa12.13□□□□□ -0.47
CHD4-202ENST00000430771 ST6GALNAC4Q9H4F1 302 aa12.13□□□□□ -0.47
CHD4-202ENST00000430771 PRMT7Q9NVM4 692 aaPredicted RBP12.13□□□□□ -0.47
CHD4-202ENST00000430771 ARHGAP28Q9P2N2 729 aa12.13□□□□□ -0.47
CHD4-202ENST00000430771 PCDHA5Q9Y5H7 936 aa12.13□□□□□ -0.47
CHD4-202ENST00000430771 ADGRA3Q8IWK6 1321 aa12.12□□□□□ -0.47
CHD4-202ENST00000430771 INO80B-WBP1J3KQ70 363 aa12.12□□□□□ -0.47
CHD4-202ENST00000430771 EIF3DO15371 548 aaKnown RBP eCLIP12.12□□□□□ -0.47
CHD4-202ENST00000430771 SLC16A4O15374 487 aa12.12□□□□□ -0.47
CHD4-202ENST00000430771 ERLIN2O94905 339 aa12.12□□□□□ -0.47
CHD4-202ENST00000430771 DARSP14868 501 aaKnown RBP12.12□□□□□ -0.47
CHD4-202ENST00000430771 EIF4BP23588 611 aaKnown RBP12.12□□□□□ -0.47
CHD4-202ENST00000430771 EHHADHQ08426 723 aa12.12□□□□□ -0.47
CHD4-202ENST00000430771 STRN3Q13033 797 aa12.12□□□□□ -0.47
CHD4-202ENST00000430771 MAPK6Q16659 721 aa12.12□□□□□ -0.47
CHD4-202ENST00000430771 RBM43Q6ZSC3 357 aaKnown RBP12.12□□□□□ -0.47
CHD4-202ENST00000430771 TSHZ1Q6ZSZ6 1077 aa12.12□□□□□ -0.47
CHD4-202ENST00000430771 FAM43BQ6ZT52 329 aaPredicted RBP12.12□□□□□ -0.47
CHD4-202ENST00000430771 SPATA20Q8TB22 786 aa12.12□□□□□ -0.47
CHD4-202ENST00000430771 ZNF668Q96K58 619 aaPredicted RBP12.12□□□□□ -0.47
CHD4-202ENST00000430771 PRIMPOLQ96LW4 560 aa12.12□□□□□ -0.47
CHD4-202ENST00000430771 TMEM134Q9H6X4 195 aa12.12□□□□□ -0.47
CHD4-202ENST00000430771 IFT122Q9HBG6 1241 aa12.12□□□□□ -0.47
CHD4-202ENST00000430771 POLD4Q9HCU8 107 aa12.12□□□□□ -0.47
CHD4-202ENST00000430771 TMEM63CQ9P1W3 806 aa12.12□□□□□ -0.47
CHD4-202ENST00000430771 KIAA1468Q9P260 1216 aa12.12□□□□□ -0.47
CHD4-202ENST00000430771 EXOC7Q9UPT5 735 aa12.12□□□□□ -0.47
CHD4-202ENST00000430771 DENND3A2RUS2 1198 aa12.11□□□□□ -0.47
CHD4-202ENST00000430771 RPS6KA5O75582 802 aa12.11□□□□□ -0.47
CHD4-202ENST00000430771 LETM1O95202 739 aaPredicted RBP12.11□□□□□ -0.47
CHD4-202ENST00000430771 TIMP1P01033 207 aa12.11□□□□□ -0.47
CHD4-202ENST00000430771 CHRNA1P02708 482 aa12.11□□□□□ -0.47
CHD4-202ENST00000430771 PRKCBP05771 671 aa12.11□□□□□ -0.47
CHD4-202ENST00000430771 IQCF3P0C7M6 154 aa12.11□□□□□ -0.47
CHD4-202ENST00000430771 GHRP10912 638 aa12.11□□□□□ -0.47
CHD4-202ENST00000430771 PPP1R2P41236 205 aa12.11□□□□□ -0.47
CHD4-202ENST00000430771 SARSP49591 514 aaKnown RBP12.11□□□□□ -0.47
CHD4-202ENST00000430771 MBTD1Q05BQ5 628 aa12.11□□□□□ -0.47
CHD4-202ENST00000430771 PAK2Q13177 524 aa12.11□□□□□ -0.47
CHD4-202ENST00000430771 STIM1Q13586 685 aa12.11□□□□□ -0.47
CHD4-202ENST00000430771 TMEM132AQ24JP5 1023 aa12.11□□□□□ -0.47
CHD4-202ENST00000430771 FBXO47Q5MNV8 452 aa12.11□□□□□ -0.47
CHD4-202ENST00000430771 TRAF7Q6Q0C0 670 aa12.11□□□□□ -0.47
CHD4-202ENST00000430771 PPP4R3CPQ6ZMV5 832 aa12.11□□□□□ -0.47
CHD4-202ENST00000430771 HAUS6Q7Z4H7 955 aa12.11□□□□□ -0.47
CHD4-202ENST00000430771 TMEM199Q8N511 208 aa12.11□□□□□ -0.47
CHD4-202ENST00000430771 TMEM161BQ8NDZ6 487 aa12.11□□□□□ -0.47
CHD4-202ENST00000430771 DPF3Q92784 378 aa12.11□□□□□ -0.47
CHD4-202ENST00000430771 APBB2Q92870 758 aa12.11□□□□□ -0.47
CHD4-202ENST00000430771 ERCC4Q92889 916 aaPredicted RBP12.11□□□□□ -0.47
CHD4-202ENST00000430771 FIZ1Q96SL8 496 aa12.11□□□□□ -0.47
CHD4-202ENST00000430771 NTPCRQ9BSD7 190 aaKnown RBP12.11□□□□□ -0.47
CHD4-202ENST00000430771 CCDC113Q9H0I3 377 aa12.11□□□□□ -0.47
CHD4-202ENST00000430771 WNT8AQ9H1J5 351 aa12.11□□□□□ -0.47
CHD4-202ENST00000430771 TBC1D7Q9P0N9 293 aa12.11□□□□□ -0.47
CHD4-202ENST00000430771 MAN1B1Q9UKM7 699 aa12.11□□□□□ -0.47
CHD4-202ENST00000430771 PCDHB13Q9Y5F0 798 aa12.11□□□□□ -0.47
CHD4-202ENST00000430771 NR2E3Q9Y5X4 410 aa12.11□□□□□ -0.47
CHD4-202ENST00000430771 UMODL1Q5DID0 1318 aa12.11□□□□□ -0.47
CHD4-202ENST00000430771 CNTNAP2Q9UHC6 1331 aa12.11□□□□□ -0.47
CHD4-202ENST00000430771 SCN5AQ14524 2016 aa12.1□□□□□ -0.47
CHD4-202ENST00000430771 TRIM43BA6NCK2 446 aa12.1□□□□□ -0.47
CHD4-202ENST00000430771 K7ERI5 159 aa12.1□□□□□ -0.47
CHD4-202ENST00000430771 GPR182O15218 404 aa12.1□□□□□ -0.47
CHD4-202ENST00000430771 PPP1R37O75864 691 aa12.1□□□□□ -0.47
CHD4-202ENST00000430771 PFKMP08237 780 aa12.1□□□□□ -0.47
CHD4-202ENST00000430771 NMT1P30419 496 aaKnown RBP12.1□□□□□ -0.47
CHD4-202ENST00000430771 CYP2C18P33260 490 aa12.1□□□□□ -0.47
CHD4-202ENST00000430771 GTF2BQ00403 316 aa12.1□□□□□ -0.47
CHD4-202ENST00000430771 NCBP1Q09161 790 aaKnown RBP12.1□□□□□ -0.47
CHD4-202ENST00000430771 FAM187BQ17R55 369 aa12.1□□□□□ -0.47
CHD4-202ENST00000430771 L1TD1Q5T7N2 865 aaKnown RBP12.1□□□□□ -0.47
CHD4-202ENST00000430771 ZNF658Q5TYW1 1059 aaPredicted RBP12.1□□□□□ -0.47
CHD4-202ENST00000430771 MFSD5Q6N075 450 aa12.1□□□□□ -0.47
CHD4-202ENST00000430771 CATSPER4Q7RTX7 472 aa12.1□□□□□ -0.47
CHD4-202ENST00000430771 ZNF720Q7Z2F6 126 aa12.1□□□□□ -0.47
CHD4-202ENST00000430771 FAM228AQ86W67 206 aa12.1□□□□□ -0.47
CHD4-202ENST00000430771 MAP4K3Q8IVH8 894 aa12.1□□□□□ -0.47
CHD4-202ENST00000430771 KIAA0895Q8NCT3 520 aa12.1□□□□□ -0.47
CHD4-202ENST00000430771 TMEM40Q8WWA1 233 aa12.1□□□□□ -0.47
CHD4-202ENST00000430771 TRIM43Q96BQ3 446 aaPredicted RBP12.1□□□□□ -0.47
CHD4-202ENST00000430771 BICD1Q96G01 975 aa12.1□□□□□ -0.47
CHD4-202ENST00000430771 MRPL4Q9BYD3 311 aaKnown RBP12.1□□□□□ -0.47
CHD4-202ENST00000430771 TMEM206Q9H813 350 aa12.1□□□□□ -0.47
CHD4-202ENST00000430771 SLC39A2Q9NP94 309 aa12.1□□□□□ -0.47
CHD4-202ENST00000430771 DACH1Q9UI36 760 aa12.1□□□□□ -0.47
CHD4-202ENST00000430771 MKI67P46013 3256 aaKnown RBP12.09□□□□□ -0.47
CHD4-202ENST00000430771 ACKR2O00590 384 aa12.09□□□□□ -0.47
CHD4-202ENST00000430771 HNRNPDLO14979 420 aaKnown RBP12.09□□□□□ -0.47
CHD4-202ENST00000430771 CAPN15O75808 1086 aa12.09□□□□□ -0.47
CHD4-202ENST00000430771 MYBP10242 640 aa12.09□□□□□ -0.47
CHD4-202ENST00000430771 AXLP30530 894 aa12.09□□□□□ -0.47
CHD4-202ENST00000430771 CCL23P55773 120 aa12.09□□□□□ -0.47
CHD4-202ENST00000430771 PPIGQ13427 754 aaKnown RBP eCLIP12.09□□□□□ -0.47
CHD4-202ENST00000430771 PRPF4BQ13523 1007 aaKnown RBP12.09□□□□□ -0.47
CHD4-202ENST00000430771 MORC3Q14149 939 aa12.09□□□□□ -0.47
CHD4-202ENST00000430771 LPIN1Q14693 890 aa12.09□□□□□ -0.47
CHD4-202ENST00000430771 BMT2Q1RMZ1 405 aa12.09□□□□□ -0.47
CHD4-202ENST00000430771 COBLL1Q53SF7 1204 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms