RNA–Protein interactions for RNA: ENST00000429746.1

CTSD-203, Transcript of cathepsin D, humanhuman

TSL 3

Gene CTSD, Length 690 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-203ENST00000429746 CHAMP1Q96JM3 812 aa19.33■□□□□ 0.68
CTSD-203ENST00000429746 PLIN2Q99541 437 aa19.33■□□□□ 0.68
CTSD-203ENST00000429746 C17orf80Q9BSJ5 609 aa19.33■□□□□ 0.68
CTSD-203ENST00000429746 CCSER1Q9C0I3 900 aa19.33■□□□□ 0.68
CTSD-203ENST00000429746 CERS4Q9HA82 394 aa19.33■□□□□ 0.68
CTSD-203ENST00000429746 C1orf112Q9NSG2 853 aa19.33■□□□□ 0.68
CTSD-203ENST00000429746 LMCD1Q9NZU5 365 aa19.33■□□□□ 0.68
CTSD-203ENST00000429746 MYH11P35749 1972 aa19.32■□□□□ 0.68
CTSD-203ENST00000429746 TCHHQ07283 1943 aa19.32■□□□□ 0.68
CTSD-203ENST00000429746 A0A087X0B3 334 aa19.32■□□□□ 0.68
CTSD-203ENST00000429746 TTLL13PA6NNM8 815 aa19.32■□□□□ 0.68
CTSD-203ENST00000429746 TSPAN1O60635 241 aa19.32■□□□□ 0.68
CTSD-203ENST00000429746 HSP90AA1P07900 732 aaKnown RBP19.32■□□□□ 0.68
CTSD-203ENST00000429746 KARSQ15046 597 aaKnown RBP19.32■□□□□ 0.68
CTSD-203ENST00000429746 NAALADL2Q58DX5 795 aa19.32■□□□□ 0.68
CTSD-203ENST00000429746 ARSHQ5FYA8 562 aa19.32■□□□□ 0.68
CTSD-203ENST00000429746 TJAP1Q5JTD0 557 aa19.32■□□□□ 0.68
CTSD-203ENST00000429746 FAM102BQ5T8I3 360 aa19.32■□□□□ 0.68
CTSD-203ENST00000429746 ECHDC2Q86YB7 292 aa19.32■□□□□ 0.68
CTSD-203ENST00000429746 KCTD17Q8N5Z5 321 aa19.32■□□□□ 0.68
CTSD-203ENST00000429746 SYT2Q8N9I0 419 aaPredicted RBP19.32■□□□□ 0.68
CTSD-203ENST00000429746 SCLT1Q96NL6 688 aa19.32■□□□□ 0.68
CTSD-203ENST00000429746 CCDC113Q9H0I3 377 aa19.32■□□□□ 0.68
CTSD-203ENST00000429746 ELAC1Q9H777 363 aaKnown RBP19.32■□□□□ 0.68
CTSD-203ENST00000429746 CHST12Q9NRB3 414 aa19.32■□□□□ 0.68
CTSD-203ENST00000429746 TMEM161AQ9NX61 479 aa19.32■□□□□ 0.68
CTSD-203ENST00000429746 TFIP11Q9UBB9 837 aaKnown RBP19.32■□□□□ 0.68
CTSD-203ENST00000429746 DNM3Q9UQ16 869 aa19.32■□□□□ 0.68
CTSD-203ENST00000429746 XIRP2A4UGR9 3374 aa19.32■□□□□ 0.68
CTSD-203ENST00000429746 A0A0U1RQF3 1178 aa19.31■□□□□ 0.68
CTSD-203ENST00000429746 DENND3A2RUS2 1198 aa19.31■□□□□ 0.68
CTSD-203ENST00000429746 PDIA4P13667 645 aaKnown RBP19.31■□□□□ 0.68
CTSD-203ENST00000429746 PLCG1P19174 1290 aa19.31■□□□□ 0.68
CTSD-203ENST00000429746 SFPQP23246 707 aaKnown RBP eCLIP19.31■□□□□ 0.68
CTSD-203ENST00000429746 CLP1Q92989 425 aaKnown RBP19.31■□□□□ 0.68
CTSD-203ENST00000429746 YME1L1Q96TA2 773 aa19.31■□□□□ 0.68
CTSD-203ENST00000429746 INO80BQ9C086 356 aaPredicted RBP19.31■□□□□ 0.68
CTSD-203ENST00000429746 THEGQ9P2T0 379 aa19.31■□□□□ 0.68
CTSD-203ENST00000429746 HCSTQ9UBK5 93 aa19.31■□□□□ 0.68
CTSD-203ENST00000429746 MEIS3P2A8K0S8 358 aa19.3■□□□□ 0.68
CTSD-203ENST00000429746 B4GALT5O43286 388 aa19.3■□□□□ 0.68
CTSD-203ENST00000429746 FGFR1P11362 822 aa19.3■□□□□ 0.68
CTSD-203ENST00000429746 GUCY2CP25092 1073 aa19.3■□□□□ 0.68
CTSD-203ENST00000429746 PHKA2P46019 1235 aa19.3■□□□□ 0.68
CTSD-203ENST00000429746 CLLU1OSQ5K130 101 aa19.3■□□□□ 0.68
CTSD-203ENST00000429746 AXDND1Q5T1B0 1012 aaPredicted RBP19.3■□□□□ 0.68
CTSD-203ENST00000429746 CATSPER4Q7RTX7 472 aa19.3■□□□□ 0.68
CTSD-203ENST00000429746 CCDC43Q96MW1 224 aaKnown RBP19.3■□□□□ 0.68
CTSD-203ENST00000429746 NT5C3AQ9H0P0 336 aa19.3■□□□□ 0.68
CTSD-203ENST00000429746 FZD8Q9H461 694 aa19.3■□□□□ 0.68
CTSD-203ENST00000429746 MTCH2Q9Y6C9 303 aa19.3■□□□□ 0.68
CTSD-203ENST00000429746 BRWD1Q9NSI6 2320 aa19.29■□□□□ 0.68
CTSD-203ENST00000429746 YEATS4O95619 227 aa19.29■□□□□ 0.68
CTSD-203ENST00000429746 PLA2G4BP0C869 781 aa19.29■□□□□ 0.68
CTSD-203ENST00000429746 ZRSR1Q15695 479 aaKnown RBP19.29■□□□□ 0.68
CTSD-203ENST00000429746 PPP4R3CPQ6ZMV5 832 aa19.29■□□□□ 0.68
CTSD-203ENST00000429746 TAS1R3Q7RTX0 852 aa19.29■□□□□ 0.68
CTSD-203ENST00000429746 CMTR2Q8IYT2 770 aaKnown RBP19.29■□□□□ 0.68
CTSD-203ENST00000429746 PPM1EQ8WY54 764 aa19.29■□□□□ 0.68
CTSD-203ENST00000429746 ARNTL2Q8WYA1 636 aa19.29■□□□□ 0.68
CTSD-203ENST00000429746 TGS1Q96RS0 853 aaKnown RBP19.29■□□□□ 0.68
CTSD-203ENST00000429746 KIFC3Q9BVG8 833 aa19.29■□□□□ 0.68
CTSD-203ENST00000429746 PIN4Q9Y237 131 aaKnown RBP19.29■□□□□ 0.68
CTSD-203ENST00000429746 MRPL42Q9Y6G3 142 aaKnown RBP19.29■□□□□ 0.68
CTSD-203ENST00000429746 PLXNA4Q9HCM2 1894 aa19.28■□□□□ 0.68
CTSD-203ENST00000429746 NPHP3-ACAD11A0A0J9YXS1 232 aa19.28■□□□□ 0.68
CTSD-203ENST00000429746 ZNF623O75123 536 aa19.28■□□□□ 0.68
CTSD-203ENST00000429746 HIP1RO75146 1068 aa19.28■□□□□ 0.68
CTSD-203ENST00000429746 PPP6R2O75170 966 aa19.28■□□□□ 0.68
CTSD-203ENST00000429746 STAG3L1P0CL83 205 aa19.28■□□□□ 0.68
CTSD-203ENST00000429746 ARF4P18085 180 aaPredicted RBP19.28■□□□□ 0.68
CTSD-203ENST00000429746 UBA7P41226 1012 aa19.28■□□□□ 0.68
CTSD-203ENST00000429746 NAMPTP43490 491 aa19.28■□□□□ 0.68
CTSD-203ENST00000429746 MRPS5P82675 430 aaKnown RBP19.28■□□□□ 0.68
CTSD-203ENST00000429746 DNM1Q05193 864 aaKnown RBP19.28■□□□□ 0.68
CTSD-203ENST00000429746 TFDP1Q14186 410 aa19.28■□□□□ 0.68
CTSD-203ENST00000429746 FAM187BQ17R55 369 aa19.28■□□□□ 0.68
CTSD-203ENST00000429746 FOXD4L6Q3SYB3 417 aaPredicted RBP19.28■□□□□ 0.68
CTSD-203ENST00000429746 FOXD4L3Q6VB84 417 aaPredicted RBP19.28■□□□□ 0.68
CTSD-203ENST00000429746 LRRC55Q6ZSA7 311 aa19.28■□□□□ 0.68
CTSD-203ENST00000429746 KRI1Q8N9T8 703 aaKnown RBP19.28■□□□□ 0.68
CTSD-203ENST00000429746 SMG8Q8ND04 991 aaKnown RBP19.28■□□□□ 0.68
CTSD-203ENST00000429746 RAD54LQ92698 747 aa19.28■□□□□ 0.68
CTSD-203ENST00000429746 SAMD11Q96NU1 681 aa19.28■□□□□ 0.68
CTSD-203ENST00000429746 CASD1Q96PB1 797 aa19.28■□□□□ 0.68
CTSD-203ENST00000429746 FAM105AQ9NUU6 356 aa19.28■□□□□ 0.68
CTSD-203ENST00000429746 MYO7AQ13402 2215 aa19.28■□□□□ 0.68
CTSD-203ENST00000429746 LRRIQ4A6NIV6 560 aa19.27■□□□□ 0.68
CTSD-203ENST00000429746 C5orf67F2Z3F1 127 aa19.27■□□□□ 0.68
CTSD-203ENST00000429746 SPTLC2O15270 562 aa19.27■□□□□ 0.68
CTSD-203ENST00000429746 ZSCAN20P17040 1043 aaPredicted RBP19.27■□□□□ 0.68
CTSD-203ENST00000429746 PCBP1Q15365 356 aaKnown RBP eCLIP19.27■□□□□ 0.685e-12■■□□□ 12.6
CTSD-203ENST00000429746 CCDC85BQ15834 202 aaPredicted RBP19.27■□□□□ 0.68
CTSD-203ENST00000429746 AAK1Q2M2I8 961 aa19.27■□□□□ 0.68
CTSD-203ENST00000429746 EPC2Q52LR7 807 aa19.27■□□□□ 0.68
CTSD-203ENST00000429746 MRPL10Q7Z7H8 261 aaKnown RBP19.27■□□□□ 0.68
CTSD-203ENST00000429746 GDPD5Q8WTR4 605 aa19.27■□□□□ 0.68
CTSD-203ENST00000429746 KIFAP3Q92845 792 aa19.27■□□□□ 0.68
CTSD-203ENST00000429746 CPB2Q96IY4 423 aa19.27■□□□□ 0.68
CTSD-203ENST00000429746 ZNF396Q96N95 335 aaPredicted RBP19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms