RNA–Protein interactions for RNA: ENST00000429629.6

GARNL3-204, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 694 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-204ENST00000429629 ZNF202O95125 648 aa16.51■□□□□ 0.23
GARNL3-204ENST00000429629 UBE2HP62256 183 aa16.51■□□□□ 0.23
GARNL3-204ENST00000429629 FAM189BP81408 668 aa16.51■□□□□ 0.23
GARNL3-204ENST00000429629 FAM160A1Q05DH4 1040 aa16.51■□□□□ 0.23
GARNL3-204ENST00000429629 NFX1Q12986 1120 aaKnown RBP16.51■□□□□ 0.23
GARNL3-204ENST00000429629 DHX8Q14562 1220 aaKnown RBP16.51■□□□□ 0.23
GARNL3-204ENST00000429629 DSC3Q14574 896 aa16.51■□□□□ 0.23
GARNL3-204ENST00000429629 LONRF3Q496Y0 759 aa16.51■□□□□ 0.23
GARNL3-204ENST00000429629 CHRDL2Q6WN34 429 aa16.51■□□□□ 0.23
GARNL3-204ENST00000429629 FMR1NBQ8N0W7 255 aaPredicted RBP16.51■□□□□ 0.23
GARNL3-204ENST00000429629 DEPTORQ8TB45 409 aa16.51■□□□□ 0.23
GARNL3-204ENST00000429629 BSNDQ8WZ55 320 aa16.51■□□□□ 0.23
GARNL3-204ENST00000429629 CCDC51Q96ER9 411 aa16.51■□□□□ 0.23
GARNL3-204ENST00000429629 TMX1Q9H3N1 280 aa16.51■□□□□ 0.23
GARNL3-204ENST00000429629 RGS18Q9NS28 235 aa16.51■□□□□ 0.23
GARNL3-204ENST00000429629 C1orf112Q9NSG2 853 aa16.51■□□□□ 0.23
GARNL3-204ENST00000429629 PRMT7Q9NVM4 692 aaPredicted RBP16.51■□□□□ 0.23
GARNL3-204ENST00000429629 DACT1Q9NYF0 836 aa16.51■□□□□ 0.23
GARNL3-204ENST00000429629 KAT6AQ92794 2004 aa16.5■□□□□ 0.23
GARNL3-204ENST00000429629 LRRIQ4A6NIV6 560 aa16.5■□□□□ 0.23
GARNL3-204ENST00000429629 ACKR2O00590 384 aa16.5■□□□□ 0.23
GARNL3-204ENST00000429629 TBCAO75347 108 aaKnown RBP16.5■□□□□ 0.23
GARNL3-204ENST00000429629 FAM13AO94988 1023 aa16.5■□□□□ 0.23
GARNL3-204ENST00000429629 ZSCAN20P17040 1043 aaPredicted RBP16.5■□□□□ 0.23
GARNL3-204ENST00000429629 PEX3P56589 373 aa16.5■□□□□ 0.23
GARNL3-204ENST00000429629 MBTD1Q05BQ5 628 aa16.5■□□□□ 0.23
GARNL3-204ENST00000429629 SNW1Q13573 536 aaKnown RBP16.5■□□□□ 0.23
GARNL3-204ENST00000429629 MAPK6Q16659 721 aa16.5■□□□□ 0.23
GARNL3-204ENST00000429629 LRIT3Q3SXY7 679 aa16.5■□□□□ 0.23
GARNL3-204ENST00000429629 OTOP2Q7RTS6 562 aa16.5■□□□□ 0.23
GARNL3-204ENST00000429629 CATSPER4Q7RTX7 472 aa16.5■□□□□ 0.23
GARNL3-204ENST00000429629 PAGE5Q96GU1 130 aa16.5■□□□□ 0.23
GARNL3-204ENST00000429629 SLC9A7Q96T83 725 aa16.5■□□□□ 0.23
GARNL3-204ENST00000429629 MINDY3Q9H8M7 445 aa16.5■□□□□ 0.23
GARNL3-204ENST00000429629 KMT5AQ9NQR1 393 aa16.5■□□□□ 0.23
GARNL3-204ENST00000429629 OLFML3Q9NRN5 406 aa16.5■□□□□ 0.23
GARNL3-204ENST00000429629 AGPAT5Q9NUQ2 364 aa16.5■□□□□ 0.23
GARNL3-204ENST00000429629 SERTAD1Q9UHV2 236 aa16.5■□□□□ 0.23
GARNL3-204ENST00000429629 SLC4A7Q9Y6M7 1214 aa16.5■□□□□ 0.23
GARNL3-204ENST00000429629 NPHP3-ACAD11A0A0J9YXS1 232 aa16.49■□□□□ 0.23
GARNL3-204ENST00000429629 CCDC169A6NNP5 214 aa16.49■□□□□ 0.23
GARNL3-204ENST00000429629 SFI1A8K8P3 1242 aa16.49■□□□□ 0.23
GARNL3-204ENST00000429629 INO80B-WBP1J3KQ70 363 aa16.49■□□□□ 0.23
GARNL3-204ENST00000429629 K7ERI5 159 aa16.49■□□□□ 0.23
GARNL3-204ENST00000429629 TRAK2O60296 914 aa16.49■□□□□ 0.23
GARNL3-204ENST00000429629 ZNF623O75123 536 aa16.49■□□□□ 0.23
GARNL3-204ENST00000429629 SKIP12755 728 aa16.49■□□□□ 0.23
GARNL3-204ENST00000429629 HOXA11P31270 313 aaPredicted RBP16.49■□□□□ 0.23
GARNL3-204ENST00000429629 NCKAP1LP55160 1127 aa16.49■□□□□ 0.23
GARNL3-204ENST00000429629 AMHR2Q16671 573 aa16.49■□□□□ 0.23
GARNL3-204ENST00000429629 TCTN1Q2MV58 587 aa16.49■□□□□ 0.23
GARNL3-204ENST00000429629 C9orf50Q5SZB4 431 aa16.49■□□□□ 0.23
GARNL3-204ENST00000429629 KRBA2Q6ZNG9 492 aa16.49■□□□□ 0.23
GARNL3-204ENST00000429629 SLC24A5Q71RS6 500 aa16.49■□□□□ 0.23
GARNL3-204ENST00000429629 RTN4RL1Q86UN2 441 aaPredicted RBP16.49■□□□□ 0.23
GARNL3-204ENST00000429629 CCDC65Q8IXS2 484 aa16.49■□□□□ 0.23
GARNL3-204ENST00000429629 CRIPAKQ8N1N5 446 aa16.49■□□□□ 0.23
GARNL3-204ENST00000429629 MYCT1Q8N699 235 aa16.49■□□□□ 0.23
GARNL3-204ENST00000429629 TMEM161BQ8NDZ6 487 aa16.49■□□□□ 0.23
GARNL3-204ENST00000429629 RSPH1Q8WYR4 309 aa16.49■□□□□ 0.23
GARNL3-204ENST00000429629 RNPC3Q96LT9 517 aaKnown RBP16.49■□□□□ 0.23
GARNL3-204ENST00000429629 PPP1R16BQ96T49 567 aa16.49■□□□□ 0.23
GARNL3-204ENST00000429629 CCDC113Q9H0I3 377 aa16.49■□□□□ 0.23
GARNL3-204ENST00000429629 GOLPH3LQ9H4A5 285 aa16.49■□□□□ 0.23
GARNL3-204ENST00000429629 ELAC1Q9H777 363 aaKnown RBP16.49■□□□□ 0.23
GARNL3-204ENST00000429629 COLQQ9Y215 455 aaPredicted RBP16.49■□□□□ 0.23
GARNL3-204ENST00000429629 TRIP12Q14669 1992 aaPredicted RBP16.48■□□□□ 0.23
GARNL3-204ENST00000429629 A0A0U1RQF3 1178 aa16.48■□□□□ 0.23
GARNL3-204ENST00000429629 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.48■□□□□ 0.23
GARNL3-204ENST00000429629 A0A1B0GUA9 196 aa16.48■□□□□ 0.23
GARNL3-204ENST00000429629 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.48■□□□□ 0.23
GARNL3-204ENST00000429629 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.48■□□□□ 0.23
GARNL3-204ENST00000429629 ERLIN2O94905 339 aa16.48■□□□□ 0.23
GARNL3-204ENST00000429629 EOMESO95936 686 aa16.48■□□□□ 0.23
GARNL3-204ENST00000429629 AMHP03971 560 aa16.48■□□□□ 0.23
GARNL3-204ENST00000429629 KCNJ6P48051 423 aa16.48■□□□□ 0.23
GARNL3-204ENST00000429629 WDR5P61964 334 aaKnown RBP16.48■□□□□ 0.23
GARNL3-204ENST00000429629 GTF2BQ00403 316 aa16.48■□□□□ 0.23
GARNL3-204ENST00000429629 ALCAMQ13740 583 aa16.48■□□□□ 0.23
GARNL3-204ENST00000429629 DYMQ7RTS9 669 aa16.48■□□□□ 0.23
GARNL3-204ENST00000429629 CNNM3Q8NE01 707 aa16.48■□□□□ 0.23
GARNL3-204ENST00000429629 TOP1MTQ969P6 601 aa16.48■□□□□ 0.23
GARNL3-204ENST00000429629 ZNF668Q96K58 619 aaPredicted RBP16.48■□□□□ 0.23
GARNL3-204ENST00000429629 FIZ1Q96SL8 496 aa16.48■□□□□ 0.23
GARNL3-204ENST00000429629 ADAM2Q99965 735 aa16.48■□□□□ 0.23
GARNL3-204ENST00000429629 WDR81Q562E7 1941 aa16.48■□□□□ 0.23
GARNL3-204ENST00000429629 LTBP2Q14767 1821 aa16.47■□□□□ 0.23
GARNL3-204ENST00000429629 MYH15Q9Y2K3 1946 aa16.47■□□□□ 0.23
GARNL3-204ENST00000429629 DENND3A2RUS2 1198 aa16.47■□□□□ 0.23
GARNL3-204ENST00000429629 C9IYK1 514 aa16.47■□□□□ 0.23
GARNL3-204ENST00000429629 GTPBP6O43824 516 aaPredicted RBP16.47■□□□□ 0.23
GARNL3-204ENST00000429629 TSPAN1O60635 241 aa16.47■□□□□ 0.23
GARNL3-204ENST00000429629 RAD51AP2Q09MP3 1159 aa16.47■□□□□ 0.23
GARNL3-204ENST00000429629 NOTUMQ6P988 496 aa16.47■□□□□ 0.23
GARNL3-204ENST00000429629 UNC13DQ70J99 1090 aa16.47■□□□□ 0.23
GARNL3-204ENST00000429629 ZNF720Q7Z2F6 126 aa16.47■□□□□ 0.23
GARNL3-204ENST00000429629 FAM178BQ8IXR5 827 aa16.47■□□□□ 0.23
GARNL3-204ENST00000429629 HVCN1Q96D96 273 aa16.47■□□□□ 0.23
GARNL3-204ENST00000429629 STRA6Q9BX79 667 aa16.47■□□□□ 0.23
GARNL3-204ENST00000429629 POLD4Q9HCU8 107 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms