RNA–Protein interactions for RNA: ENST00000429436.6

MARK3-205, Transcript of microtubule affinity regulating kinase 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene MARK3, Length 3,371 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-205ENST00000429436 DDX39AO00148 427 aaKnown RBP15.9■□□□□ 0.14
MARK3-205ENST00000429436 TRIM37O94972 964 aa15.9■□□□□ 0.14
MARK3-205ENST00000429436 HLA-DOAP06340 250 aa15.9■□□□□ 0.14
MARK3-205ENST00000429436 FAM86B2P0C5J1 330 aa15.9■□□□□ 0.14
MARK3-205ENST00000429436 USP11P51784 963 aa15.9■□□□□ 0.14
MARK3-205ENST00000429436 UAP1Q16222 522 aaPredicted RBP15.9■□□□□ 0.14
MARK3-205ENST00000429436 TPCN2Q8NHX9 752 aa15.9■□□□□ 0.14
MARK3-205ENST00000429436 MGARPQ8TDB4 240 aa15.9■□□□□ 0.14
MARK3-205ENST00000429436 ELMO3Q96BJ8 720 aa15.9■□□□□ 0.14
MARK3-205ENST00000429436 HOOK2Q96ED9 719 aa15.9■□□□□ 0.14
MARK3-205ENST00000429436 PIDD1Q9HB75 910 aa15.9■□□□□ 0.14
MARK3-205ENST00000429436 UTRNP46939 3433 aa15.9■□□□□ 0.14
MARK3-205ENST00000429436 TRAPPC3O43617 180 aa15.9■□□□□ 0.14
MARK3-205ENST00000429436 GNAT1P11488 350 aa15.9■□□□□ 0.14
MARK3-205ENST00000429436 HOXD13P35453 343 aa15.9■□□□□ 0.14
MARK3-205ENST00000429436 SLC12A3P55017 1021 aa15.9■□□□□ 0.14
MARK3-205ENST00000429436 TMEM62Q0P6H9 643 aa15.9■□□□□ 0.14
MARK3-205ENST00000429436 MPP3Q13368 585 aa15.9■□□□□ 0.14
MARK3-205ENST00000429436 ARHGAP22Q7Z5H3 698 aa15.9■□□□□ 0.14
MARK3-205ENST00000429436 ABCB11O95342 1321 aa15.9■□□□□ 0.14
MARK3-205ENST00000429436 DDX3XO00571 662 aaKnown RBP eCLIP15.89■□□□□ 0.13
MARK3-205ENST00000429436 RTN3O95197 1032 aaPredicted RBP15.89■□□□□ 0.13
MARK3-205ENST00000429436 IMPDH2P12268 514 aa15.89■□□□□ 0.13
MARK3-205ENST00000429436 SLCO1A2P46721 670 aa15.89■□□□□ 0.13
MARK3-205ENST00000429436 ZNF746Q6NUN9 644 aaPredicted RBP15.89■□□□□ 0.13
MARK3-205ENST00000429436 MIS18BP1Q6P0N0 1132 aa15.89■□□□□ 0.13
MARK3-205ENST00000429436 RANBP17Q9H2T7 1088 aaKnown RBP15.89■□□□□ 0.13
MARK3-205ENST00000429436 MLXIPLQ9NP71 852 aa15.89■□□□□ 0.13
MARK3-205ENST00000429436 TRIM33Q9UPN9 1127 aa15.89■□□□□ 0.13
MARK3-205ENST00000429436 MGRN1O60291 552 aa15.89■□□□□ 0.13
MARK3-205ENST00000429436 FAM13AO94988 1023 aa15.89■□□□□ 0.13
MARK3-205ENST00000429436 CFBP00751 764 aa15.89■□□□□ 0.13
MARK3-205ENST00000429436 PLTPP55058 493 aa15.89■□□□□ 0.13
MARK3-205ENST00000429436 ZYXQ15942 572 aaKnown RBP15.89■□□□□ 0.13
MARK3-205ENST00000429436 CDC42EP5Q6NZY7 148 aa15.89■□□□□ 0.13
MARK3-205ENST00000429436 FAM81AQ8TBF8 368 aa15.89■□□□□ 0.13
MARK3-205ENST00000429436 RBM17Q96I25 401 aaKnown RBP15.89■□□□□ 0.13
MARK3-205ENST00000429436 TSC22D3Q99576 134 aa15.89■□□□□ 0.13
MARK3-205ENST00000429436 OSBPL1AQ9BXW6 950 aa15.89■□□□□ 0.13
MARK3-205ENST00000429436 PNMA2Q9UL42 364 aa15.89■□□□□ 0.13
MARK3-205ENST00000429436 SLC8A3P57103 927 aa15.89■□□□□ 0.13
MARK3-205ENST00000429436 ZNF844Q08AG5 666 aa15.89■□□□□ 0.13
MARK3-205ENST00000429436 ZNF280DQ6N043 979 aa15.89■□□□□ 0.13
MARK3-205ENST00000429436 CCDC197Q8NCU1 140 aa15.89■□□□□ 0.13
MARK3-205ENST00000429436 SYN2Q92777 582 aaPredicted RBP15.89■□□□□ 0.13
MARK3-205ENST00000429436 TRIM11Q96F44 468 aa15.89■□□□□ 0.13
MARK3-205ENST00000429436 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.89■□□□□ 0.138e-7■□□□□ 10.2
MARK3-205ENST00000429436 ISCUQ9H1K1 167 aa15.89■□□□□ 0.13
MARK3-205ENST00000429436 PCIF1Q9H4Z3 704 aa15.89■□□□□ 0.13
MARK3-205ENST00000429436 TAS2R14Q9NYV8 317 aa15.89■□□□□ 0.13
MARK3-205ENST00000429436 PPP1R9AQ9ULJ8 1098 aa15.89■□□□□ 0.13
MARK3-205ENST00000429436 SNX24Q9Y343 169 aa15.89■□□□□ 0.13
MARK3-205ENST00000429436 LAMB1P07942 1786 aa15.88■□□□□ 0.13
MARK3-205ENST00000429436 ATXN2Q99700 1313 aaKnown RBP15.88■□□□□ 0.13
MARK3-205ENST00000429436 EML1O00423 815 aa15.88■□□□□ 0.13
MARK3-205ENST00000429436 STAT1P42224 750 aa15.88■□□□□ 0.13
MARK3-205ENST00000429436 CTCFP49711 727 aaPredicted RBP15.88■□□□□ 0.13
MARK3-205ENST00000429436 XRCC4Q13426 336 aa15.88■□□□□ 0.13
MARK3-205ENST00000429436 GPATCH4Q5T3I0 446 aaKnown RBP15.88■□□□□ 0.13
MARK3-205ENST00000429436 ERMNQ8TAM6 284 aa15.88■□□□□ 0.13
MARK3-205ENST00000429436 SLC35G2Q8TBE7 412 aa15.88■□□□□ 0.13
MARK3-205ENST00000429436 TMBIM4Q9HC24 238 aa15.88■□□□□ 0.13
MARK3-205ENST00000429436 ABCF3Q9NUQ8 709 aa15.88■□□□□ 0.13
MARK3-205ENST00000429436 NOP53Q9NZM5 478 aaKnown RBP15.88■□□□□ 0.13
MARK3-205ENST00000429436 CALUO43852 315 aaPredicted RBP15.88■□□□□ 0.13
MARK3-205ENST00000429436 SMARCA1P28370 1054 aa15.88■□□□□ 0.13
MARK3-205ENST00000429436 MYBPC2Q14324 1141 aa15.88■□□□□ 0.13
MARK3-205ENST00000429436 TAF11Q15544 211 aa15.88■□□□□ 0.13
MARK3-205ENST00000429436 CDCA2Q69YH5 1023 aaPredicted RBP15.88■□□□□ 0.13
MARK3-205ENST00000429436 CCDC25Q86WR0 208 aa15.88■□□□□ 0.13
MARK3-205ENST00000429436 CCT6BQ92526 530 aa15.88■□□□□ 0.13
MARK3-205ENST00000429436 AMFRQ9UKV5 643 aa15.88■□□□□ 0.13
MARK3-205ENST00000429436 ZBTB21Q9ULJ3 1066 aa15.88■□□□□ 0.13
MARK3-205ENST00000429436 AGAP1Q9UPQ3 857 aa15.88■□□□□ 0.13
MARK3-205ENST00000429436 ZSCAN9O15535 394 aaPredicted RBP15.87■□□□□ 0.13
MARK3-205ENST00000429436 MAP3K13O43283 966 aa15.87■□□□□ 0.13
MARK3-205ENST00000429436 IL1R1P14778 569 aa15.87■□□□□ 0.13
MARK3-205ENST00000429436 CLK2P49760 499 aaKnown RBP15.87■□□□□ 0.13
MARK3-205ENST00000429436 POLE2P56282 527 aa15.87■□□□□ 0.13
MARK3-205ENST00000429436 PPP2R2AP63151 447 aa15.87■□□□□ 0.13
MARK3-205ENST00000429436 DRAP1Q14919 205 aaPredicted RBP15.87■□□□□ 0.13
MARK3-205ENST00000429436 CERKLQ49MI3 558 aaPredicted RBP15.87■□□□□ 0.13
MARK3-205ENST00000429436 PALB2Q86YC2 1186 aa15.87■□□□□ 0.13
MARK3-205ENST00000429436 EXOC8Q8IYI6 725 aa15.87■□□□□ 0.13
MARK3-205ENST00000429436 LRRC45Q96CN5 670 aa15.87■□□□□ 0.13
MARK3-205ENST00000429436 ARPC5LQ9BPX5 153 aa15.87■□□□□ 0.13
MARK3-205ENST00000429436 MTFR1LQ9H019 292 aa15.87■□□□□ 0.13
MARK3-205ENST00000429436 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.87■□□□□ 0.13
MARK3-205ENST00000429436 UTP11Q9Y3A2 253 aaKnown RBP15.87■□□□□ 0.13
MARK3-205ENST00000429436 RABGAP1Q9Y3P9 1069 aa15.87■□□□□ 0.13
MARK3-205ENST00000429436 hCG_1984214I3L0E3 225 aa15.87■□□□□ 0.13
MARK3-205ENST00000429436 SHBGP04278 402 aa15.87■□□□□ 0.13
MARK3-205ENST00000429436 SPATA31C1P0DKV0 1188 aa15.87■□□□□ 0.13
MARK3-205ENST00000429436 GABPAQ06546 454 aa15.87■□□□□ 0.13
MARK3-205ENST00000429436 IFI16Q16666 785 aaKnown RBP15.87■□□□□ 0.13
MARK3-205ENST00000429436 FAM47EQ6ZV65 393 aa15.87■□□□□ 0.13
MARK3-205ENST00000429436 FAM186BQ8IYM0 893 aa15.87■□□□□ 0.13
MARK3-205ENST00000429436 ZNF713Q8N859 430 aaPredicted RBP15.87■□□□□ 0.13
MARK3-205ENST00000429436 SLC35C1Q96A29 364 aa15.87■□□□□ 0.13
MARK3-205ENST00000429436 DNAJC12Q9UKB3 198 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms