RNA–Protein interactions for RNA: ENST00000429416.7

SMARCA4-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2 BASIC

Gene SMARCA4, Length 5,691 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-203ENST00000429416 HPS3Q969F9 1004 aa18.35■□□□□ 0.53
SMARCA4-203ENST00000429416 GMCL1Q96IK5 515 aa18.35■□□□□ 0.53
SMARCA4-203ENST00000429416 TUBE1Q9UJT0 475 aa18.35■□□□□ 0.53
SMARCA4-203ENST00000429416 IRF6O14896 467 aa18.35■□□□□ 0.53
SMARCA4-203ENST00000429416 TBXAS1P24557 533 aaPredicted RBP18.35■□□□□ 0.53
SMARCA4-203ENST00000429416 TROAPQ12815 778 aa18.35■□□□□ 0.53
SMARCA4-203ENST00000429416 PROM2Q8N271 834 aa18.35■□□□□ 0.53
SMARCA4-203ENST00000429416 SH3TC2Q8TF17 1288 aa18.35■□□□□ 0.53
SMARCA4-203ENST00000429416 PDCD6IPQ8WUM4 868 aaKnown RBP18.35■□□□□ 0.53
SMARCA4-203ENST00000429416 SALL1Q9NSC2 1324 aa18.35■□□□□ 0.53
SMARCA4-203ENST00000429416 INHBEP58166 350 aa18.34■□□□□ 0.53
SMARCA4-203ENST00000429416 ZBED6P86452 979 aa18.34■□□□□ 0.53
SMARCA4-203ENST00000429416 TMEM132DQ14C87 1099 aa18.34■□□□□ 0.53
SMARCA4-203ENST00000429416 TNIP3Q96KP6 325 aa18.34■□□□□ 0.53
SMARCA4-203ENST00000429416 SUPT20HL2P0C7V6 817 aa18.34■□□□□ 0.53
SMARCA4-203ENST00000429416 ATF7IP2Q5U623 682 aa18.34■□□□□ 0.53
SMARCA4-203ENST00000429416 ARHGEF18Q6ZSZ5 1173 aa18.34■□□□□ 0.53
SMARCA4-203ENST00000429416 AFAP1L2Q8N4X5 818 aa18.34■□□□□ 0.53
SMARCA4-203ENST00000429416 YME1L1Q96TA2 773 aa18.34■□□□□ 0.53
SMARCA4-203ENST00000429416 MAP3K14Q99558 947 aa18.34■□□□□ 0.53
SMARCA4-203ENST00000429416 SPTLC3Q9NUV7 552 aa18.34■□□□□ 0.53
SMARCA4-203ENST00000429416 GLTPD2A6NH11 291 aa18.34■□□□□ 0.53
SMARCA4-203ENST00000429416 STAG3L1P0CL83 205 aa18.34■□□□□ 0.53
SMARCA4-203ENST00000429416 TAL1P17542 331 aaPredicted RBP18.34■□□□□ 0.53
SMARCA4-203ENST00000429416 SMARCA1P28370 1054 aa18.34■□□□□ 0.53
SMARCA4-203ENST00000429416 CCDC6Q16204 474 aa18.34■□□□□ 0.53
SMARCA4-203ENST00000429416 EFCAB13Q8IY85 973 aa18.34■□□□□ 0.53
SMARCA4-203ENST00000429416 MAGOHBQ96A72 148 aaKnown RBP18.34■□□□□ 0.53
SMARCA4-203ENST00000429416 TMEM169Q96HH4 297 aa18.34■□□□□ 0.53
SMARCA4-203ENST00000429416 SEPT5Q99719 369 aaPredicted RBP18.34■□□□□ 0.53
SMARCA4-203ENST00000429416 REEP2Q9BRK0 252 aa18.34■□□□□ 0.53
SMARCA4-203ENST00000429416 STRNO43815 780 aa18.34■□□□□ 0.53
SMARCA4-203ENST00000429416 SERPING1P05155 500 aa18.34■□□□□ 0.53
SMARCA4-203ENST00000429416 YWHAGP61981 247 aaKnown RBP eCLIP18.34■□□□□ 0.533e-6■■□□□ 13.8
SMARCA4-203ENST00000429416 BTBD8Q5XKL5 378 aa18.34■□□□□ 0.53
SMARCA4-203ENST00000429416 APPL2Q8NEU8 664 aa18.34■□□□□ 0.53
SMARCA4-203ENST00000429416 GDAP1L1Q96MZ0 367 aa18.34■□□□□ 0.53
SMARCA4-203ENST00000429416 EMSYQ7Z589 1322 aa18.34■□□□□ 0.53
SMARCA4-203ENST00000429416 VIMP08670 466 aaKnown RBP18.34■□□□□ 0.53
SMARCA4-203ENST00000429416 SSTR3P32745 418 aaPredicted RBP18.34■□□□□ 0.53
SMARCA4-203ENST00000429416 SEPT6Q14141 434 aa18.34■□□□□ 0.53
SMARCA4-203ENST00000429416 HHATQ5VTY9 493 aa18.34■□□□□ 0.53
SMARCA4-203ENST00000429416 GMCL1P1Q8NEA9 526 aa18.34■□□□□ 0.53
SMARCA4-203ENST00000429416 CEP63Q96MT8 703 aa18.34■□□□□ 0.53
SMARCA4-203ENST00000429416 C11orf70Q9BRQ4 267 aa18.34■□□□□ 0.53
SMARCA4-203ENST00000429416 TIPINQ9BVW5 301 aa18.34■□□□□ 0.53
SMARCA4-203ENST00000429416 ALDH8A1Q9H2A2 487 aaPredicted RBP18.34■□□□□ 0.53
SMARCA4-203ENST00000429416 XPNPEP3Q9NQH7 507 aa18.34■□□□□ 0.53
SMARCA4-203ENST00000429416 GOLGA8CPA6NN73 597 aa18.33■□□□□ 0.53
SMARCA4-203ENST00000429416 NME3Q13232 169 aa18.33■□□□□ 0.53
SMARCA4-203ENST00000429416 MROH1Q8NDA8 1641 aa18.33■□□□□ 0.53
SMARCA4-203ENST00000429416 SOCS4Q8WXH5 440 aa18.33■□□□□ 0.53
SMARCA4-203ENST00000429416 IDI2Q9BXS1 227 aa18.33■□□□□ 0.53
SMARCA4-203ENST00000429416 NPTXRO95502 500 aa18.33■□□□□ 0.53
SMARCA4-203ENST00000429416 ATP1A3P13637 1013 aa18.33■□□□□ 0.53
SMARCA4-203ENST00000429416 GUCY2FP51841 1108 aa18.33■□□□□ 0.53
SMARCA4-203ENST00000429416 SIK2Q9H0K1 926 aa18.33■□□□□ 0.53
SMARCA4-203ENST00000429416 AAASQ9NRG9 546 aa18.33■□□□□ 0.53
SMARCA4-203ENST00000429416 IRAK4Q9NWZ3 460 aa18.33■□□□□ 0.53
SMARCA4-203ENST00000429416 HPCAL4Q9UM19 191 aa18.33■□□□□ 0.53
SMARCA4-203ENST00000429416 PCDHAC2Q9Y5I4 1007 aa18.33■□□□□ 0.53
SMARCA4-203ENST00000429416 TCP1P17987 556 aaKnown RBP18.33■□□□□ 0.52
SMARCA4-203ENST00000429416 PTPRAP18433 802 aa18.33■□□□□ 0.52
SMARCA4-203ENST00000429416 GNA15P30679 374 aa18.33■□□□□ 0.52
SMARCA4-203ENST00000429416 CLCN3P51790 818 aa18.33■□□□□ 0.52
SMARCA4-203ENST00000429416 NOTUMQ6P988 496 aa18.33■□□□□ 0.52
SMARCA4-203ENST00000429416 SPON2Q9BUD6 331 aa18.33■□□□□ 0.52
SMARCA4-203ENST00000429416 ERVK-9P63128 1117 aa18.33■□□□□ 0.52
SMARCA4-203ENST00000429416 ERVK-24P63145 666 aa18.33■□□□□ 0.52
SMARCA4-203ENST00000429416 ALKBH5Q6P6C2 394 aaKnown RBP18.33■□□□□ 0.52
SMARCA4-203ENST00000429416 PRMT7Q9NVM4 692 aaPredicted RBP18.33■□□□□ 0.52
SMARCA4-203ENST00000429416 CCDC85CA6NKD9 419 aa18.32■□□□□ 0.52
SMARCA4-203ENST00000429416 VWA5AO00534 786 aa18.32■□□□□ 0.52
SMARCA4-203ENST00000429416 PDGFRBP09619 1106 aa18.32■□□□□ 0.52
SMARCA4-203ENST00000429416 PLS3P13797 630 aa18.32■□□□□ 0.52
SMARCA4-203ENST00000429416 SP3Q02447 781 aa18.32■□□□□ 0.52
SMARCA4-203ENST00000429416 KIZQ2M2Z5 673 aa18.32■□□□□ 0.52
SMARCA4-203ENST00000429416 HINFPQ9BQA5 517 aa18.32■□□□□ 0.52
SMARCA4-203ENST00000429416 SCINQ9Y6U3 715 aa18.32■□□□□ 0.52
SMARCA4-203ENST00000429416 UBR1Q8IWV7 1749 aa18.32■□□□□ 0.52
SMARCA4-203ENST00000429416 UHMK1Q8TAS1 419 aaKnown RBP18.32■□□□□ 0.52
SMARCA4-203ENST00000429416 SCYL1Q96KG9 808 aa18.32■□□□□ 0.52
SMARCA4-203ENST00000429416 GOLPH3LQ9H4A5 285 aa18.32■□□□□ 0.52
SMARCA4-203ENST00000429416 TMEM39AQ9NV64 488 aa18.32■□□□□ 0.52
SMARCA4-203ENST00000429416 TMEM88BA6NKF7 163 aa18.32■□□□□ 0.52
SMARCA4-203ENST00000429416 ENC1O14682 589 aa18.32■□□□□ 0.52
SMARCA4-203ENST00000429416 GMNNO75496 209 aa18.32■□□□□ 0.52
SMARCA4-203ENST00000429416 ZNF286BP0CG31 522 aa18.32■□□□□ 0.52
SMARCA4-203ENST00000429416 RBP5P82980 135 aa18.32■□□□□ 0.52
SMARCA4-203ENST00000429416 DENND2CQ68D51 928 aa18.32■□□□□ 0.52
SMARCA4-203ENST00000429416 ANKS4BQ8N8V4 417 aa18.32■□□□□ 0.52
SMARCA4-203ENST00000429416 KLK14Q9P0G3 267 aa18.32■□□□□ 0.52
SMARCA4-203ENST00000429416 STAP1Q9ULZ2 295 aa18.32■□□□□ 0.52
SMARCA4-203ENST00000429416 CREB3O43889 395 aa18.32■□□□□ 0.52
SMARCA4-203ENST00000429416 PHBP35232 272 aa18.32■□□□□ 0.52
SMARCA4-203ENST00000429416 VPS52Q8N1B4 723 aa18.32■□□□□ 0.52
SMARCA4-203ENST00000429416 FBXL13Q8NEE6 735 aa18.32■□□□□ 0.52
SMARCA4-203ENST00000429416 VPS18Q9P253 973 aa18.32■□□□□ 0.52
SMARCA4-203ENST00000429416 BUB1BO60566 1050 aaPredicted RBP18.32■□□□□ 0.52
SMARCA4-203ENST00000429416 RALAP11233 206 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms