RNA–Protein interactions for RNA: ENST00000429411.5

HPS4-205, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 3,492 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-205ENST00000429411 GLT8D2Q9H1C3 349 aa8.7□□□□□ -1.02
HPS4-205ENST00000429411 FBXO28Q9NVF7 368 aa8.7□□□□□ -1.02
HPS4-205ENST00000429411 MTRF1LQ9UGC7 380 aaKnown RBP8.7□□□□□ -1.02
HPS4-205ENST00000429411 CASZ1Q86V15 1759 aa8.7□□□□□ -1.02
HPS4-205ENST00000429411 SBF2Q86WG5 1849 aa8.7□□□□□ -1.02
HPS4-205ENST00000429411 COL4A1P02462 1669 aa8.7□□□□□ -1.02
HPS4-205ENST00000429411 FRMD3A2A2Y4 597 aa8.7□□□□□ -1.02
HPS4-205ENST00000429411 BCRP11274 1271 aa8.7□□□□□ -1.02
HPS4-205ENST00000429411 NEFHP12036 1026 aa8.7□□□□□ -1.02
HPS4-205ENST00000429411 USP11P51784 963 aa8.7□□□□□ -1.02
HPS4-205ENST00000429411 EPC2Q52LR7 807 aa8.7□□□□□ -1.02
HPS4-205ENST00000429411 FAM133BQ5BKY9 247 aaKnown RBP8.7□□□□□ -1.02
HPS4-205ENST00000429411 GSTA5Q7RTV2 222 aa8.7□□□□□ -1.02
HPS4-205ENST00000429411 SP8Q8IXZ3 490 aa8.7□□□□□ -1.02
HPS4-205ENST00000429411 UBL4BQ8N7F7 174 aa8.7□□□□□ -1.02
HPS4-205ENST00000429411 TPCN2Q8NHX9 752 aa8.7□□□□□ -1.02
HPS4-205ENST00000429411 PURBQ96QR8 312 aaKnown RBP8.7□□□□□ -1.02
HPS4-205ENST00000429411 RAB17Q9H0T7 212 aa8.7□□□□□ -1.02
HPS4-205ENST00000429411 TMEM150BA6NC51 233 aa8.7□□□□□ -1.02
HPS4-205ENST00000429411 HMGB1P1B2RPK0 211 aaPredicted RBP8.7□□□□□ -1.02
HPS4-205ENST00000429411 FTLP02792 175 aaPredicted RBP8.7□□□□□ -1.02
HPS4-205ENST00000429411 PRLRP16471 622 aa8.7□□□□□ -1.02
HPS4-205ENST00000429411 STAT2P52630 851 aa8.7□□□□□ -1.02
HPS4-205ENST00000429411 BIRC3Q13489 604 aa8.7□□□□□ -1.02
HPS4-205ENST00000429411 ZRSR2Q15696 482 aaKnown RBP8.7□□□□□ -1.02
HPS4-205ENST00000429411 SLC30A5Q8TAD4 765 aa8.7□□□□□ -1.02
HPS4-205ENST00000429411 RBM46Q8TBY0 533 aaKnown RBP8.7□□□□□ -1.02
HPS4-205ENST00000429411 KCNV2Q8TDN2 545 aa8.7□□□□□ -1.02
HPS4-205ENST00000429411 SAAL1Q96ER3 474 aa8.7□□□□□ -1.02
HPS4-205ENST00000429411 FAM84AQ96KN4 292 aa8.7□□□□□ -1.02
HPS4-205ENST00000429411 MYCBPQ99417 103 aaPredicted RBP8.7□□□□□ -1.02
HPS4-205ENST00000429411 EDEM3Q9BZQ6 932 aa8.7□□□□□ -1.02
HPS4-205ENST00000429411 ARHGEF10LQ9HCE6 1279 aa8.7□□□□□ -1.02
HPS4-205ENST00000429411 PLCB1Q9NQ66 1216 aa8.7□□□□□ -1.02
HPS4-205ENST00000429411 ZNRF3Q9ULT6 936 aa8.7□□□□□ -1.02
HPS4-205ENST00000429411 TNS1Q9HBL0 1735 aaKnown RBP8.69□□□□□ -1.02
HPS4-205ENST00000429411 PAPPAQ13219 1627 aa8.69□□□□□ -1.02
HPS4-205ENST00000429411 CEP290O15078 2479 aa8.69□□□□□ -1.02
HPS4-205ENST00000429411 EMSYQ7Z589 1322 aa8.69□□□□□ -1.02
HPS4-205ENST00000429411 DDX3XO00571 662 aaKnown RBP eCLIP8.69□□□□□ -1.02
HPS4-205ENST00000429411 EGFRP00533 1210 aa8.69□□□□□ -1.02
HPS4-205ENST00000429411 CLTAP09496 248 aa8.69□□□□□ -1.02
HPS4-205ENST00000429411 RPA1P27694 616 aa8.69□□□□□ -1.02
HPS4-205ENST00000429411 HNRNPH3P31942 346 aaKnown RBP8.69□□□□□ -1.02
HPS4-205ENST00000429411 PEX3P56589 373 aa8.69□□□□□ -1.02
HPS4-205ENST00000429411 PLCB3Q01970 1234 aa8.69□□□□□ -1.02
HPS4-205ENST00000429411 HP1BP3Q5SSJ5 553 aaPredicted RBP8.69□□□□□ -1.02
HPS4-205ENST00000429411 GKAP1Q5VSY0 366 aaPredicted RBP8.69□□□□□ -1.02
HPS4-205ENST00000429411 FRMD5Q7Z6J6 570 aa8.69□□□□□ -1.02
HPS4-205ENST00000429411 TTC30BQ8N4P2 665 aa8.69□□□□□ -1.02
HPS4-205ENST00000429411 ACER1Q8TDN7 264 aa8.69□□□□□ -1.02
HPS4-205ENST00000429411 TCP11Q8WWU5 503 aa8.69□□□□□ -1.02
HPS4-205ENST00000429411 ZNF653Q96CK0 615 aa8.69□□□□□ -1.02
HPS4-205ENST00000429411 INTS2Q9H0H0 1204 aaKnown RBP8.69□□□□□ -1.02
HPS4-205ENST00000429411 TAS2R14Q9NYV8 317 aa8.69□□□□□ -1.02
HPS4-205ENST00000429411 AJAP1Q9UKB5 411 aaPredicted RBP8.69□□□□□ -1.02
HPS4-205ENST00000429411 PPP1R9AQ9ULJ8 1098 aa8.69□□□□□ -1.02
HPS4-205ENST00000429411 PDXKO00764 312 aa8.69□□□□□ -1.02
HPS4-205ENST00000429411 FOSP01100 380 aaPredicted RBP8.69□□□□□ -1.02
HPS4-205ENST00000429411 CALCAP01258 141 aa8.69□□□□□ -1.02
HPS4-205ENST00000429411 EIF2AK2P19525 551 aaKnown RBP8.69□□□□□ -1.02
HPS4-205ENST00000429411 VASPP50552 380 aaPredicted RBP8.69□□□□□ -1.02
HPS4-205ENST00000429411 MTMR3Q13615 1198 aa8.69□□□□□ -1.02
HPS4-205ENST00000429411 XKR9Q5GH70 373 aa8.69□□□□□ -1.02
HPS4-205ENST00000429411 LMBRD2Q68DH5 695 aaPredicted RBP8.69□□□□□ -1.02
HPS4-205ENST00000429411 RINT1Q6NUQ1 792 aa8.69□□□□□ -1.02
HPS4-205ENST00000429411 RPUSD2Q8IZ73 545 aaKnown RBP8.69□□□□□ -1.02
HPS4-205ENST00000429411 GDAP1Q8TB36 358 aa8.69□□□□□ -1.02
HPS4-205ENST00000429411 SLC20A1Q8WUM9 679 aa8.69□□□□□ -1.02
HPS4-205ENST00000429411 HEMGNQ9BXL5 484 aa8.69□□□□□ -1.02
HPS4-205ENST00000429411 SAMD15Q9P1V8 674 aa8.69□□□□□ -1.02
HPS4-205ENST00000429411 FOXN3O00409 490 aaPredicted RBP8.68□□□□□ -1.02
HPS4-205ENST00000429411 SLC16A4O15374 487 aa8.68□□□□□ -1.02
HPS4-205ENST00000429411 MEFVO15553 781 aaPredicted RBP8.68□□□□□ -1.02
HPS4-205ENST00000429411 PJA2O43164 708 aa8.68□□□□□ -1.02
HPS4-205ENST00000429411 RPSAP08865 295 aaKnown RBP8.68□□□□□ -1.02
HPS4-205ENST00000429411 IL1R1P14778 569 aa8.68□□□□□ -1.02
HPS4-205ENST00000429411 EPHX2P34913 555 aa8.68□□□□□ -1.02
HPS4-205ENST00000429411 SOX5P35711 763 aa8.68□□□□□ -1.02
HPS4-205ENST00000429411 FMO5P49326 533 aa8.68□□□□□ -1.02
HPS4-205ENST00000429411 PTGISQ16647 500 aa8.68□□□□□ -1.02
HPS4-205ENST00000429411 EDRF1Q3B7T1 1238 aa8.68□□□□□ -1.02
HPS4-205ENST00000429411 MMS22LQ6ZRQ5 1243 aa8.68□□□□□ -1.02
HPS4-205ENST00000429411 SYT2Q8N9I0 419 aaPredicted RBP8.68□□□□□ -1.02
HPS4-205ENST00000429411 SUPT20HQ8NEM7 779 aa8.68□□□□□ -1.02
HPS4-205ENST00000429411 MYCBPAPQ8TBZ2 947 aa8.68□□□□□ -1.02
HPS4-205ENST00000429411 SLC35C1Q96A29 364 aa8.68□□□□□ -1.02
HPS4-205ENST00000429411 INPP4AQ96PE3 977 aaPredicted RBP8.68□□□□□ -1.02
HPS4-205ENST00000429411 ELAC2Q9BQ52 826 aaKnown RBP8.68□□□□□ -1.02
HPS4-205ENST00000429411 LXNQ9BS40 222 aa8.68□□□□□ -1.02
HPS4-205ENST00000429411 GLIS2Q9BZE0 524 aaPredicted RBP8.68□□□□□ -1.02
HPS4-205ENST00000429411 EPN3Q9H201 632 aa8.68□□□□□ -1.02
HPS4-205ENST00000429411 NEUROG2Q9H2A3 272 aa8.68□□□□□ -1.02
HPS4-205ENST00000429411 AZI2Q9H6S1 392 aa8.68□□□□□ -1.02
HPS4-205ENST00000429411 EHMT1Q9H9B1 1298 aa8.68□□□□□ -1.02
HPS4-205ENST00000429411 LARSQ9P2J5 1176 aaKnown RBP8.68□□□□□ -1.02
HPS4-205ENST00000429411 MTUS1Q9ULD2 1270 aa8.68□□□□□ -1.02
HPS4-205ENST00000429411 PRR12Q9ULL5 1215 aa8.68□□□□□ -1.02
HPS4-205ENST00000429411 STK38LQ9Y2H1 464 aa8.68□□□□□ -1.02
HPS4-205ENST00000429411 NR2E1Q9Y466 385 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms