RNA–Protein interactions for RNA: ENST00000429277.6

LDB3-205, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 5,436 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-205ENST00000429277 PFDN1O60925 122 aa13.61□□□□□ -0.23
LDB3-205ENST00000429277 MAPRE2Q15555 327 aa13.61□□□□□ -0.23
LDB3-205ENST00000429277 TADA2BQ86TJ2 420 aa13.61□□□□□ -0.23
LDB3-205ENST00000429277 TTC17Q96AE7 1141 aa13.61□□□□□ -0.23
LDB3-205ENST00000429277 AIFM3Q96NN9 605 aa13.61□□□□□ -0.23
LDB3-205ENST00000429277 CFAP65Q6ZU64 1925 aaKnown RBP13.61□□□□□ -0.23
LDB3-205ENST00000429277 LRRC53A6NM62 1247 aa13.61□□□□□ -0.23
LDB3-205ENST00000429277 CHUKO15111 745 aa13.61□□□□□ -0.23
LDB3-205ENST00000429277 ECE2O60344 883 aa13.61□□□□□ -0.23
LDB3-205ENST00000429277 GCLMP48507 274 aa13.61□□□□□ -0.23
LDB3-205ENST00000429277 EPHA7Q15375 998 aa13.61□□□□□ -0.23
LDB3-205ENST00000429277 TBCCQ15814 346 aa13.61□□□□□ -0.23
LDB3-205ENST00000429277 EPM2AIP1Q7L775 607 aaPredicted RBP13.61□□□□□ -0.23
LDB3-205ENST00000429277 MB21D2Q8IYB1 491 aaPredicted RBP13.61□□□□□ -0.23
LDB3-205ENST00000429277 TRIML2Q8N7C3 387 aa13.61□□□□□ -0.23
LDB3-205ENST00000429277 ATP11CQ8NB49 1132 aa13.61□□□□□ -0.23
LDB3-205ENST00000429277 GRAMD1AQ96CP6 724 aa13.61□□□□□ -0.23
LDB3-205ENST00000429277 DYDC2Q96IM9 177 aa13.61□□□□□ -0.23
LDB3-205ENST00000429277 FAM213AQ9BRX8 229 aa13.61□□□□□ -0.23
LDB3-205ENST00000429277 OSBPL5Q9H0X9 879 aaPredicted RBP13.61□□□□□ -0.23
LDB3-205ENST00000429277 TUFT1Q9NNX1 390 aa13.61□□□□□ -0.23
LDB3-205ENST00000429277 SENP1Q9P0U3 644 aa13.61□□□□□ -0.23
LDB3-205ENST00000429277 PPARGC1AQ9UBK2 798 aaKnown RBP13.61□□□□□ -0.23
LDB3-205ENST00000429277 POTEMA6NI47 508 aa13.61□□□□□ -0.23
LDB3-205ENST00000429277 TRPA1O75762 1119 aa13.61□□□□□ -0.23
LDB3-205ENST00000429277 TOB2Q14106 344 aaPredicted RBP13.61□□□□□ -0.23
LDB3-205ENST00000429277 IMPG1Q17R60 797 aa13.61□□□□□ -0.23
LDB3-205ENST00000429277 MFSD14CQ5VZR4 134 aa13.61□□□□□ -0.23
LDB3-205ENST00000429277 NUDT18Q6ZVK8 323 aa13.61□□□□□ -0.23
LDB3-205ENST00000429277 FRMD5Q7Z6J6 570 aa13.61□□□□□ -0.23
LDB3-205ENST00000429277 SGMS1Q86VZ5 419 aa13.61□□□□□ -0.23
LDB3-205ENST00000429277 TBC1D10CQ8IV04 446 aa13.61□□□□□ -0.23
LDB3-205ENST00000429277 GPD1LQ8N335 351 aa13.61□□□□□ -0.23
LDB3-205ENST00000429277 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.61□□□□□ -0.23
LDB3-205ENST00000429277 INTS2Q9H0H0 1204 aaKnown RBP13.61□□□□□ -0.23
LDB3-205ENST00000429277 PNPLA7Q6ZV29 1317 aa13.61□□□□□ -0.23
LDB3-205ENST00000429277 GYG2O15488 501 aa13.6□□□□□ -0.23
LDB3-205ENST00000429277 MYO1DO94832 1006 aa13.6□□□□□ -0.23
LDB3-205ENST00000429277 ATP1A3P13637 1013 aa13.6□□□□□ -0.23
LDB3-205ENST00000429277 GNA15P30679 374 aa13.6□□□□□ -0.23
LDB3-205ENST00000429277 SLC1A1P43005 524 aa13.6□□□□□ -0.23
LDB3-205ENST00000429277 DHX34Q14147 1143 aaKnown RBP13.6□□□□□ -0.23
LDB3-205ENST00000429277 KCNB1Q14721 858 aa13.6□□□□□ -0.23
LDB3-205ENST00000429277 NBPF10Q6P3W6 841 aaKnown RBP13.6□□□□□ -0.23
LDB3-205ENST00000429277 ENAHQ8N8S7 591 aaPredicted RBP13.6□□□□□ -0.23
LDB3-205ENST00000429277 TNIP3Q96KP6 325 aa13.6□□□□□ -0.23
LDB3-205ENST00000429277 ASPSCR1Q9BZE9 553 aa13.6□□□□□ -0.23
LDB3-205ENST00000429277 SNX24Q9Y343 169 aa13.6□□□□□ -0.23
LDB3-205ENST00000429277 WDR91A4D1P6 747 aa13.6□□□□□ -0.23
LDB3-205ENST00000429277 M0QYV0 167 aa13.6□□□□□ -0.23
LDB3-205ENST00000429277 PPP1R12AO14974 1030 aaPredicted RBP13.6□□□□□ -0.23
LDB3-205ENST00000429277 MKRN3Q13064 507 aaKnown RBP13.6□□□□□ -0.23
LDB3-205ENST00000429277 GRAMD1BQ3KR37 738 aa13.6□□□□□ -0.23
LDB3-205ENST00000429277 SYDE1Q6ZW31 735 aaPredicted RBP13.6□□□□□ -0.23
LDB3-205ENST00000429277 KSR1Q8IVT5 923 aa13.6□□□□□ -0.23
LDB3-205ENST00000429277 NEDD1Q8NHV4 660 aa13.6□□□□□ -0.23
LDB3-205ENST00000429277 NCLNQ969V3 563 aa13.6□□□□□ -0.23
LDB3-205ENST00000429277 RAVER2Q9HCJ3 691 aaKnown RBP13.6□□□□□ -0.23
LDB3-205ENST00000429277 DNAJC17Q9NVM6 304 aaKnown RBP13.6□□□□□ -0.23
LDB3-205ENST00000429277 SLC16A4O15374 487 aa13.6□□□□□ -0.23
LDB3-205ENST00000429277 SCN4BQ8IWT1 228 aa13.6□□□□□ -0.23
LDB3-205ENST00000429277 BANK1Q8NDB2 785 aa13.6□□□□□ -0.23
LDB3-205ENST00000429277 STOML1Q9UBI4 398 aa13.6□□□□□ -0.23
LDB3-205ENST00000429277 NEDD4P46934 1319 aa13.6□□□□□ -0.23
LDB3-205ENST00000429277 ESRRBO95718 433 aa13.6□□□□□ -0.23
LDB3-205ENST00000429277 FCER1AP12319 257 aa13.6□□□□□ -0.23
LDB3-205ENST00000429277 BCAR1P56945 870 aa13.6□□□□□ -0.23
LDB3-205ENST00000429277 PSMC1P62191 440 aaKnown RBP13.6□□□□□ -0.23
LDB3-205ENST00000429277 VEPH1Q14D04 833 aa13.6□□□□□ -0.23
LDB3-205ENST00000429277 KCTD17Q8N5Z5 321 aa13.6□□□□□ -0.23
LDB3-205ENST00000429277 C11orf70Q9BRQ4 267 aa13.6□□□□□ -0.23
LDB3-205ENST00000429277 NUP85Q9BW27 656 aa13.6□□□□□ -0.23
LDB3-205ENST00000429277 LY9Q9HBG7 655 aa13.6□□□□□ -0.23
LDB3-205ENST00000429277 PRR36Q9H6K5 1346 aa13.59□□□□□ -0.23
LDB3-205ENST00000429277 SLC16A3O15427 465 aaKnown RBP13.59□□□□□ -0.23
LDB3-205ENST00000429277 C21orf2O43822 256 aa13.59□□□□□ -0.23
LDB3-205ENST00000429277 ANP32DO95626 131 aa13.59□□□□□ -0.23
LDB3-205ENST00000429277 PMS2P54278 862 aa13.59□□□□□ -0.23
LDB3-205ENST00000429277 ROR1Q01973 937 aa13.59□□□□□ -0.23
LDB3-205ENST00000429277 PDIA5Q14554 519 aa13.59□□□□□ -0.23
LDB3-205ENST00000429277 TKFCQ3LXA3 575 aa13.59□□□□□ -0.23
LDB3-205ENST00000429277 PDXDC1Q6P996 788 aa13.59□□□□□ -0.23
LDB3-205ENST00000429277 RNF217Q8TC41 542 aa13.59□□□□□ -0.23
LDB3-205ENST00000429277 MRGBPQ9NV56 204 aa13.59□□□□□ -0.23
LDB3-205ENST00000429277 ZNF197O14709 1029 aa13.59□□□□□ -0.23
LDB3-205ENST00000429277 PSMD3O43242 534 aa13.59□□□□□ -0.23
LDB3-205ENST00000429277 TADA3O75528 432 aa13.59□□□□□ -0.23
LDB3-205ENST00000429277 RALAP11233 206 aa13.59□□□□□ -0.23
LDB3-205ENST00000429277 PRCPP42785 496 aa13.59□□□□□ -0.23
LDB3-205ENST00000429277 SLC7A5Q01650 507 aa13.59□□□□□ -0.23
LDB3-205ENST00000429277 DUOXA2Q1HG44 320 aa13.59□□□□□ -0.23
LDB3-205ENST00000429277 SIRT2Q8IXJ6 389 aa13.59□□□□□ -0.23
LDB3-205ENST00000429277 RFFLQ8WZ73 363 aa13.59□□□□□ -0.23
LDB3-205ENST00000429277 LZICQ8WZA0 190 aa13.59□□□□□ -0.23
LDB3-205ENST00000429277 CEP95Q96GE4 821 aa13.59□□□□□ -0.23
LDB3-205ENST00000429277 GPBP1L1Q9HC44 474 aaPredicted RBP13.59□□□□□ -0.23
LDB3-205ENST00000429277 SFI1A8K8P3 1242 aa13.59□□□□□ -0.23
LDB3-205ENST00000429277 E2F6O75461 281 aa13.59□□□□□ -0.23
LDB3-205ENST00000429277 MCF2P10911 925 aa13.59□□□□□ -0.23
LDB3-205ENST00000429277 PRDX5P30044 214 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms