RNA–Protein interactions for RNA: ENST00000428828.1

CECR3-201, Transcript of cat eye syndrome chromosome region, candidate 3, humanhuman

TSL 1 (best) BASIC

Gene CECR3, Length 1,915 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CECR3-201ENST00000428828 ZNF579Q8NAF0 562 aaKnown RBP12.44□□□□□ -0.42
CECR3-201ENST00000428828 NOA1Q8NC60 698 aaKnown RBP12.44□□□□□ -0.42
CECR3-201ENST00000428828 ERMNQ8TAM6 284 aa12.44□□□□□ -0.42
CECR3-201ENST00000428828 DYDC2Q96IM9 177 aa12.44□□□□□ -0.42
CECR3-201ENST00000428828 AK8Q96MA6 479 aa12.44□□□□□ -0.42
CECR3-201ENST00000428828 EIF2AK1Q9BQI3 630 aaKnown RBP12.44□□□□□ -0.42
CECR3-201ENST00000428828 SLC40A1Q9NP59 571 aa12.44□□□□□ -0.42
CECR3-201ENST00000428828 FANCLQ9NW38 375 aa12.44□□□□□ -0.42
CECR3-201ENST00000428828 RGL1Q9NZL6 768 aa12.44□□□□□ -0.42
CECR3-201ENST00000428828 MYH11P35749 1972 aa12.43□□□□□ -0.42
CECR3-201ENST00000428828 POTEB3A0JP26 581 aa12.43□□□□□ -0.42
CECR3-201ENST00000428828 DYNC1LI2O43237 492 aaPredicted RBP12.43□□□□□ -0.42
CECR3-201ENST00000428828 MED24O75448 989 aa12.43□□□□□ -0.42
CECR3-201ENST00000428828 PECAM1P16284 738 aaPredicted RBP12.43□□□□□ -0.42
CECR3-201ENST00000428828 JAK3P52333 1124 aa12.43□□□□□ -0.42
CECR3-201ENST00000428828 APBA1Q02410 837 aa12.43□□□□□ -0.42
CECR3-201ENST00000428828 CKAP4Q07065 602 aaKnown RBP12.43□□□□□ -0.42
CECR3-201ENST00000428828 SLC5A9Q2M3M2 681 aa12.43□□□□□ -0.42
CECR3-201ENST00000428828 HAUS3Q68CZ6 603 aa12.43□□□□□ -0.42
CECR3-201ENST00000428828 ZNF746Q6NUN9 644 aaPredicted RBP12.43□□□□□ -0.42
CECR3-201ENST00000428828 POTEBQ6S5H4 581 aa12.43□□□□□ -0.42
CECR3-201ENST00000428828 B3GNT9Q6UX72 402 aa12.43□□□□□ -0.42
CECR3-201ENST00000428828 CCNI2Q6ZMN8 369 aaPredicted RBP12.43□□□□□ -0.42
CECR3-201ENST00000428828 CCDC13Q8IYE1 715 aa12.43□□□□□ -0.42
CECR3-201ENST00000428828 ENOX1Q8TC92 643 aaKnown RBP12.43□□□□□ -0.42
CECR3-201ENST00000428828 RSRC1Q96IZ7 334 aaKnown RBP12.43□□□□□ -0.42
CECR3-201ENST00000428828 CDK5RAP3Q96JB5 506 aa12.43□□□□□ -0.42
CECR3-201ENST00000428828 PAIP2Q9BPZ3 127 aaKnown RBP12.43□□□□□ -0.42
CECR3-201ENST00000428828 MMTAG2Q9BU76 263 aaKnown RBP12.43□□□□□ -0.42
CECR3-201ENST00000428828 A0A087X0B3 334 aa12.43□□□□□ -0.42
CECR3-201ENST00000428828 POTEFA5A3E0 1075 aa12.43□□□□□ -0.42
CECR3-201ENST00000428828 BACH1O14867 736 aa12.43□□□□□ -0.42
CECR3-201ENST00000428828 LIN7AO14910 233 aaPredicted RBP12.43□□□□□ -0.42
CECR3-201ENST00000428828 SFNP31947 248 aa12.43□□□□□ -0.42
CECR3-201ENST00000428828 TCF7P36402 384 aaPredicted RBP12.43□□□□□ -0.42
CECR3-201ENST00000428828 POTEGQ6S5H5 508 aa12.43□□□□□ -0.42
CECR3-201ENST00000428828 C6orf89Q6UWU4 347 aa12.43□□□□□ -0.42
CECR3-201ENST00000428828 TRAPPC11Q7Z392 1133 aa12.43□□□□□ -0.42
CECR3-201ENST00000428828 TPH2Q8IWU9 490 aa12.43□□□□□ -0.42
CECR3-201ENST00000428828 SLC35F6Q8N357 371 aa12.43□□□□□ -0.42
CECR3-201ENST00000428828 AENQ8WTP8 325 aaKnown RBP12.43□□□□□ -0.42
CECR3-201ENST00000428828 AFG1LQ8WV93 481 aa12.43□□□□□ -0.42
CECR3-201ENST00000428828 CALML4Q96GE6 196 aa12.43□□□□□ -0.42
CECR3-201ENST00000428828 EPN3Q9H201 632 aa12.43□□□□□ -0.42
CECR3-201ENST00000428828 DACH1Q9UI36 760 aa12.43□□□□□ -0.42
CECR3-201ENST00000428828 KCNH3Q9ULD8 1083 aa12.43□□□□□ -0.42
CECR3-201ENST00000428828 GNEQ9Y223 722 aaKnown RBP12.43□□□□□ -0.42
CECR3-201ENST00000428828 HPSEQ9Y251 543 aa12.43□□□□□ -0.42
CECR3-201ENST00000428828 PCDHA10Q9Y5I2 948 aa12.43□□□□□ -0.42
CECR3-201ENST00000428828 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.43□□□□□ -0.42
CECR3-201ENST00000428828 GSTTP1A0A1W2PQM5 241 aa12.42□□□□□ -0.42
CECR3-201ENST00000428828 NKRFO15226 690 aaKnown RBP eCLIP12.42□□□□□ -0.42
CECR3-201ENST00000428828 POLR2DO15514 142 aaKnown RBP12.42□□□□□ -0.42
CECR3-201ENST00000428828 SEPT4O43236 478 aa12.42□□□□□ -0.42
CECR3-201ENST00000428828 PSAPP07602 524 aa12.42□□□□□ -0.42
CECR3-201ENST00000428828 BEX3Q00994 111 aa12.42□□□□□ -0.42
CECR3-201ENST00000428828 LAMC2Q13753 1193 aa12.42□□□□□ -0.42
CECR3-201ENST00000428828 NR1I3Q14994 352 aa12.42□□□□□ -0.42
CECR3-201ENST00000428828 EPHA7Q15375 998 aa12.42□□□□□ -0.42
CECR3-201ENST00000428828 ECM1Q16610 540 aa12.42□□□□□ -0.42
CECR3-201ENST00000428828 UGCGQ16739 394 aa12.42□□□□□ -0.42
CECR3-201ENST00000428828 MAP3K21Q5TCX8 1036 aa12.42□□□□□ -0.42
CECR3-201ENST00000428828 SWSAP1Q6NVH7 229 aa12.42□□□□□ -0.42
CECR3-201ENST00000428828 MIS18BP1Q6P0N0 1132 aa12.42□□□□□ -0.42
CECR3-201ENST00000428828 CATSPER3Q86XQ3 398 aa12.42□□□□□ -0.42
CECR3-201ENST00000428828 TRIM50Q86XT4 487 aa12.42□□□□□ -0.42
CECR3-201ENST00000428828 CCDC60Q8IWA6 550 aaPredicted RBP12.42□□□□□ -0.42
CECR3-201ENST00000428828 SAAL1Q96ER3 474 aa12.42□□□□□ -0.42
CECR3-201ENST00000428828 GPR20Q99678 358 aa12.42□□□□□ -0.42
CECR3-201ENST00000428828 LXNQ9BS40 222 aa12.42□□□□□ -0.42
CECR3-201ENST00000428828 DESI2Q9BSY9 194 aa12.42□□□□□ -0.42
CECR3-201ENST00000428828 SELENOOQ9BVL4 669 aa12.42□□□□□ -0.42
CECR3-201ENST00000428828 IRX2Q9BZI1 471 aaPredicted RBP12.42□□□□□ -0.42
CECR3-201ENST00000428828 AP5M1Q9H0R1 490 aa12.42□□□□□ -0.42
CECR3-201ENST00000428828 HMX1Q9NP08 348 aaPredicted RBP12.42□□□□□ -0.42
CECR3-201ENST00000428828 GABBR1Q9UBS5 961 aa12.42□□□□□ -0.42
CECR3-201ENST00000428828 A0A1B0GTH6 734 aa12.41□□□□□ -0.42
CECR3-201ENST00000428828 PGK1P00558 417 aa12.41□□□□□ -0.42
CECR3-201ENST00000428828 C6orf222P0C671 652 aaPredicted RBP12.41□□□□□ -0.42
CECR3-201ENST00000428828 SUPT20HL2P0C7V6 817 aa12.41□□□□□ -0.42
CECR3-201ENST00000428828 RARBP10826 455 aa12.41□□□□□ -0.42
CECR3-201ENST00000428828 PLCG1P19174 1290 aa12.41□□□□□ -0.42
CECR3-201ENST00000428828 GCKP35557 465 aa12.41□□□□□ -0.42
CECR3-201ENST00000428828 SYKP43405 635 aa12.41□□□□□ -0.42
CECR3-201ENST00000428828 ITIH3Q06033 890 aa12.41□□□□□ -0.42
CECR3-201ENST00000428828 GRB10Q13322 594 aa12.41□□□□□ -0.42
CECR3-201ENST00000428828 CYB5D1Q6P9G0 228 aa12.41□□□□□ -0.42
CECR3-201ENST00000428828 CRELD2Q6UXH1 353 aaPredicted RBP12.41□□□□□ -0.42
CECR3-201ENST00000428828 ABHD15Q6UXT9 468 aa12.41□□□□□ -0.42
CECR3-201ENST00000428828 RAD9BQ6WBX8 426 aa12.41□□□□□ -0.42
CECR3-201ENST00000428828 ZNF662Q6ZS27 426 aa12.41□□□□□ -0.42
CECR3-201ENST00000428828 SEPT1Q8WYJ6 367 aa12.41□□□□□ -0.42
CECR3-201ENST00000428828 BORCS6Q96GS4 357 aa12.41□□□□□ -0.42
CECR3-201ENST00000428828 PNMA5Q96PV4 448 aa12.41□□□□□ -0.42
CECR3-201ENST00000428828 LZTFL1Q9NQ48 299 aa12.41□□□□□ -0.42
CECR3-201ENST00000428828 CPSF2Q9P2I0 782 aaKnown RBP12.41□□□□□ -0.42
CECR3-201ENST00000428828 WRAP73Q9P2S5 460 aaPredicted RBP12.41□□□□□ -0.42
CECR3-201ENST00000428828 KIAA1024Q9UPX6 916 aa12.41□□□□□ -0.42
CECR3-201ENST00000428828 SYNRGQ9UMZ2 1314 aa12.41□□□□□ -0.42
CECR3-201ENST00000428828 KDM3AQ9Y4C1 1321 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms