RNA–Protein interactions for RNA: ENST00000428361.5

CTDSP1-202, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 842 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-202ENST00000428361 GIT2Q14161 759 aa17.26■□□□□ 0.35
CTDSP1-202ENST00000428361 TFDP1Q14186 410 aa17.26■□□□□ 0.35
CTDSP1-202ENST00000428361 EMC2Q15006 297 aa17.26■□□□□ 0.35
CTDSP1-202ENST00000428361 XKR9Q5GH70 373 aa17.26■□□□□ 0.35
CTDSP1-202ENST00000428361 TMEM184AQ6ZMB5 413 aa17.26■□□□□ 0.35
CTDSP1-202ENST00000428361 LRRC55Q6ZSA7 311 aa17.26■□□□□ 0.35
CTDSP1-202ENST00000428361 SLC39A11Q8N1S5 342 aa17.26■□□□□ 0.35
CTDSP1-202ENST00000428361 TMEM87AQ8NBN3 555 aa17.26■□□□□ 0.35
CTDSP1-202ENST00000428361 CNNM3Q8NE01 707 aa17.26■□□□□ 0.35
CTDSP1-202ENST00000428361 TNFRSF25Q93038 417 aa17.26■□□□□ 0.35
CTDSP1-202ENST00000428361 DYDC2Q96IM9 177 aa17.26■□□□□ 0.35
CTDSP1-202ENST00000428361 UBN1Q9NPG3 1134 aa17.26■□□□□ 0.35
CTDSP1-202ENST00000428361 GJB4Q9NTQ9 266 aa17.26■□□□□ 0.35
CTDSP1-202ENST00000428361 CLEC1BQ9P126 229 aa17.26■□□□□ 0.35
CTDSP1-202ENST00000428361 KANSL3Q9P2N6 904 aa17.26■□□□□ 0.35
CTDSP1-202ENST00000428361 CNTNAP2Q9UHC6 1331 aa17.25■□□□□ 0.35
CTDSP1-202ENST00000428361 CSDE1O75534 798 aaKnown RBP17.25■□□□□ 0.35
CTDSP1-202ENST00000428361 DGAT1O75907 488 aa17.25■□□□□ 0.35
CTDSP1-202ENST00000428361 ERLIN2O94905 339 aa17.25■□□□□ 0.35
CTDSP1-202ENST00000428361 LYPLA2O95372 231 aa17.25■□□□□ 0.35
CTDSP1-202ENST00000428361 ATF7P17544 494 aaPredicted RBP17.25■□□□□ 0.35
CTDSP1-202ENST00000428361 AXLP30530 894 aa17.25■□□□□ 0.35
CTDSP1-202ENST00000428361 CYP4A11Q02928 519 aa17.25■□□□□ 0.35
CTDSP1-202ENST00000428361 RNASELQ05823 741 aaKnown RBP17.25■□□□□ 0.35
CTDSP1-202ENST00000428361 SPIRE1Q08AE8 756 aa17.25■□□□□ 0.35
CTDSP1-202ENST00000428361 ORC2Q13416 577 aaPredicted RBP17.25■□□□□ 0.35
CTDSP1-202ENST00000428361 NOMO2Q5JPE7 1267 aa17.25■□□□□ 0.35
CTDSP1-202ENST00000428361 TPH2Q8IWU9 490 aa17.25■□□□□ 0.35
CTDSP1-202ENST00000428361 PRPF31Q8WWY3 499 aaKnown RBP17.25■□□□□ 0.35
CTDSP1-202ENST00000428361 CASP10Q92851 521 aa17.25■□□□□ 0.35
CTDSP1-202ENST00000428361 KHSRPQ92945 711 aaKnown RBP eCLIP17.25■□□□□ 0.35
CTDSP1-202ENST00000428361 CCDC51Q96ER9 411 aa17.25■□□□□ 0.35
CTDSP1-202ENST00000428361 TTC12Q9H892 705 aaPredicted RBP17.25■□□□□ 0.35
CTDSP1-202ENST00000428361 IFT122Q9HBG6 1241 aa17.25■□□□□ 0.35
CTDSP1-202ENST00000428361 ANKEF1Q9NU02 776 aa17.25■□□□□ 0.35
CTDSP1-202ENST00000428361 HCSTQ9UBK5 93 aa17.25■□□□□ 0.35
CTDSP1-202ENST00000428361 BARX2Q9UMQ3 279 aaPredicted RBP17.25■□□□□ 0.35
CTDSP1-202ENST00000428361 PER2O15055 1255 aa17.24■□□□□ 0.35
CTDSP1-202ENST00000428361 GLP2RO95838 553 aa17.24■□□□□ 0.35
CTDSP1-202ENST00000428361 SRGAP2CP0DJJ0 459 aa17.24■□□□□ 0.35
CTDSP1-202ENST00000428361 BCAR1P56945 870 aa17.24■□□□□ 0.35
CTDSP1-202ENST00000428361 POU5F1BQ06416 359 aa17.24■□□□□ 0.35
CTDSP1-202ENST00000428361 LAMTOR4Q0VGL1 99 aa17.24■□□□□ 0.35
CTDSP1-202ENST00000428361 CTTNQ14247 550 aaKnown RBP17.24■□□□□ 0.35
CTDSP1-202ENST00000428361 TPRNQ4KMQ1 711 aa17.24■□□□□ 0.35
CTDSP1-202ENST00000428361 FERMT3Q86UX7 667 aa17.24■□□□□ 0.35
CTDSP1-202ENST00000428361 KSR1Q8IVT5 923 aa17.24■□□□□ 0.35
CTDSP1-202ENST00000428361 HACE1Q8IYU2 909 aa17.24■□□□□ 0.35
CTDSP1-202ENST00000428361 RNF149Q8NC42 400 aa17.24■□□□□ 0.35
CTDSP1-202ENST00000428361 TMEM143Q96AN5 459 aa17.24■□□□□ 0.35
CTDSP1-202ENST00000428361 FAM122AQ96E09 287 aa17.24■□□□□ 0.35
CTDSP1-202ENST00000428361 EIF2AK1Q9BQI3 630 aaKnown RBP17.24■□□□□ 0.35
CTDSP1-202ENST00000428361 LLPHQ9BRT6 129 aaKnown RBP17.24■□□□□ 0.35
CTDSP1-202ENST00000428361 PHF7Q9BWX1 381 aaPredicted RBP17.24■□□□□ 0.35
CTDSP1-202ENST00000428361 RGL1Q9NZL6 768 aa17.24■□□□□ 0.35
CTDSP1-202ENST00000428361 LIMCH1Q9UPQ0 1083 aa17.24■□□□□ 0.35
CTDSP1-202ENST00000428361 USP15Q9Y4E8 981 aaPredicted RBP17.24■□□□□ 0.35
CTDSP1-202ENST00000428361 BTBD18B2RXH4 712 aa17.23■□□□□ 0.35
CTDSP1-202ENST00000428361 ZC3H11AO75152 810 aaKnown RBP eCLIP17.23■□□□□ 0.352e-6■■■■■ 37.4
CTDSP1-202ENST00000428361 LARGE1O95461 756 aa17.23■□□□□ 0.35
CTDSP1-202ENST00000428361 XRCC6P12956 609 aaKnown RBP eCLIP17.23■□□□□ 0.358e-6■□□□□ 10.2
CTDSP1-202ENST00000428361 HMGN5P82970 282 aaKnown RBP17.23■□□□□ 0.35
CTDSP1-202ENST00000428361 HERC4Q5GLZ8 1057 aaPredicted RBP17.23■□□□□ 0.35
CTDSP1-202ENST00000428361 EARS2Q5JPH6 523 aaKnown RBP17.23■□□□□ 0.35
CTDSP1-202ENST00000428361 FAM193BQ96PV7 902 aaPredicted RBP17.23■□□□□ 0.35
CTDSP1-202ENST00000428361 WRAP73Q9P2S5 460 aaPredicted RBP17.23■□□□□ 0.35
CTDSP1-202ENST00000428361 PCDHB2Q9Y5E7 798 aa17.23■□□□□ 0.35
CTDSP1-202ENST00000428361 PCDHGC5Q9Y5F6 944 aa17.23■□□□□ 0.35
CTDSP1-202ENST00000428361 FAM86C2PA6NEL3 165 aa17.22■□□□□ 0.35
CTDSP1-202ENST00000428361 SLITRK3O94933 977 aa17.22■□□□□ 0.35
CTDSP1-202ENST00000428361 PLA2G5P39877 138 aa17.22■□□□□ 0.35
CTDSP1-202ENST00000428361 TECP42680 631 aa17.22■□□□□ 0.35
CTDSP1-202ENST00000428361 TXKP42681 527 aa17.22■□□□□ 0.35
CTDSP1-202ENST00000428361 NOTUMQ6P988 496 aa17.22■□□□□ 0.35
CTDSP1-202ENST00000428361 MRPL43Q8N983 215 aaKnown RBP17.22■□□□□ 0.35
CTDSP1-202ENST00000428361 ERMNQ8TAM6 284 aa17.22■□□□□ 0.35
CTDSP1-202ENST00000428361 C8orf76Q96K31 380 aa17.22■□□□□ 0.35
CTDSP1-202ENST00000428361 ZSCAN31Q96LW9 406 aaPredicted RBP17.22■□□□□ 0.35
CTDSP1-202ENST00000428361 HSD17B14Q9BPX1 270 aa17.22■□□□□ 0.35
CTDSP1-202ENST00000428361 RSAD1Q9HA92 442 aa17.22■□□□□ 0.35
CTDSP1-202ENST00000428361 C11orf16Q9NQ32 467 aa17.22■□□□□ 0.35
CTDSP1-202ENST00000428361 SH2B1Q9NRF2 756 aaPredicted RBP17.22■□□□□ 0.35
CTDSP1-202ENST00000428361 TBC1D13Q9NVG8 400 aa17.22■□□□□ 0.35
CTDSP1-202ENST00000428361 DAXXQ9UER7 740 aaPredicted RBP17.22■□□□□ 0.35
CTDSP1-202ENST00000428361 INPP5FQ9Y2H2 1132 aa17.22■□□□□ 0.35
CTDSP1-202ENST00000428361 FAM205CA6NFA0 338 aa17.21■□□□□ 0.35
CTDSP1-202ENST00000428361 JAK2O60674 1132 aa17.21■□□□□ 0.35
CTDSP1-202ENST00000428361 OFD1O75665 1012 aa17.21■□□□□ 0.35
CTDSP1-202ENST00000428361 CA8P35219 290 aa17.21■□□□□ 0.35
CTDSP1-202ENST00000428361 PBX3P40426 434 aa17.21■□□□□ 0.35
CTDSP1-202ENST00000428361 GNL2Q13823 731 aaKnown RBP17.21■□□□□ 0.35
CTDSP1-202ENST00000428361 CES5AQ6NT32 575 aa17.21■□□□□ 0.35
CTDSP1-202ENST00000428361 ANKRD54Q6NXT1 300 aa17.21■□□□□ 0.35
CTDSP1-202ENST00000428361 MRPL10Q7Z7H8 261 aaKnown RBP17.21■□□□□ 0.35
CTDSP1-202ENST00000428361 RNF135Q8IUD6 432 aa17.21■□□□□ 0.35
CTDSP1-202ENST00000428361 VPS52Q8N1B4 723 aa17.21■□□□□ 0.35
CTDSP1-202ENST00000428361 FAM184AQ8NB25 1140 aa17.21■□□□□ 0.35
CTDSP1-202ENST00000428361 NECTIN4Q96NY8 510 aa17.21■□□□□ 0.35
CTDSP1-202ENST00000428361 TMEM175Q9BSA9 504 aa17.21■□□□□ 0.35
CTDSP1-202ENST00000428361 NFKBIZQ9BYH8 718 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms