RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 MEIS3P2A8K0S8 358 aa20.51■□□□□ 0.87
PSPC1-202ENST00000427943 ADAM15Q13444 863 aa20.51■□□□□ 0.87
PSPC1-202ENST00000427943 ZNF174Q15697 407 aa20.51■□□□□ 0.87
PSPC1-202ENST00000427943 PUS10Q3MIT2 529 aaKnown RBP20.51■□□□□ 0.87
PSPC1-202ENST00000427943 PLPP4Q5VZY2 271 aa20.51■□□□□ 0.87
PSPC1-202ENST00000427943 SRGAP1Q7Z6B7 1085 aa20.51■□□□□ 0.87
PSPC1-202ENST00000427943 FBXO18Q8NFZ0 1043 aa20.51■□□□□ 0.87
PSPC1-202ENST00000427943 PIGOQ8TEQ8 1089 aa20.51■□□□□ 0.87
PSPC1-202ENST00000427943 MRPS27Q92552 414 aaKnown RBP20.51■□□□□ 0.87
PSPC1-202ENST00000427943 TRAIPQ9BWF2 469 aa20.51■□□□□ 0.87
PSPC1-202ENST00000427943 FOXP1Q9H334 677 aaPredicted RBP20.51■□□□□ 0.87
PSPC1-202ENST00000427943 ANKEF1Q9NU02 776 aa20.51■□□□□ 0.87
PSPC1-202ENST00000427943 PER2O15055 1255 aa20.5■□□□□ 0.87
PSPC1-202ENST00000427943 OR52Z1P0C646 297 aa20.5■□□□□ 0.87
PSPC1-202ENST00000427943 RARRES1P49788 294 aa20.5■□□□□ 0.87
PSPC1-202ENST00000427943 NBR1Q14596 966 aa20.5■□□□□ 0.87
PSPC1-202ENST00000427943 TTC38Q5R3I4 469 aa20.5■□□□□ 0.87
PSPC1-202ENST00000427943 EFHBQ8N7U6 833 aa20.5■□□□□ 0.87
PSPC1-202ENST00000427943 MRPL9Q9BYD2 267 aaKnown RBP20.5■□□□□ 0.87
PSPC1-202ENST00000427943 TLE6Q9H808 572 aa20.5■□□□□ 0.87
PSPC1-202ENST00000427943 INPP5FQ9Y2H2 1132 aa20.5■□□□□ 0.87
PSPC1-202ENST00000427943 NT5C1B-RDH14C9J2C7 533 aa20.49■□□□□ 0.87
PSPC1-202ENST00000427943 ASAP2O43150 1006 aa20.49■□□□□ 0.87
PSPC1-202ENST00000427943 USO1O60763 962 aaKnown RBP20.49■□□□□ 0.87
PSPC1-202ENST00000427943 GLP2RO95838 553 aa20.49■□□□□ 0.87
PSPC1-202ENST00000427943 SKIP12755 728 aa20.49■□□□□ 0.87
PSPC1-202ENST00000427943 SSTR3P32745 418 aaPredicted RBP20.49■□□□□ 0.87
PSPC1-202ENST00000427943 PPM1AP35813 382 aa20.49■□□□□ 0.87
PSPC1-202ENST00000427943 TECP42680 631 aa20.49■□□□□ 0.87
PSPC1-202ENST00000427943 RAB27AP51159 221 aa20.49■□□□□ 0.87
PSPC1-202ENST00000427943 PLCB3Q01970 1234 aa20.49■□□□□ 0.87
PSPC1-202ENST00000427943 RABEP1Q15276 862 aa20.49■□□□□ 0.87
PSPC1-202ENST00000427943 NOSTRINQ8IVI9 506 aa20.49■□□□□ 0.87
PSPC1-202ENST00000427943 SLC39A11Q8N1S5 342 aa20.49■□□□□ 0.87
PSPC1-202ENST00000427943 ASAP3Q8TDY4 903 aa20.49■□□□□ 0.87
PSPC1-202ENST00000427943 ENTPD7Q9NQZ7 604 aa20.49■□□□□ 0.87
PSPC1-202ENST00000427943 SPG21Q9NZD8 308 aa20.49■□□□□ 0.87
PSPC1-202ENST00000427943 CD207Q9UJ71 328 aa20.49■□□□□ 0.87
PSPC1-202ENST00000427943 BARX2Q9UMQ3 279 aaPredicted RBP20.49■□□□□ 0.87
PSPC1-202ENST00000427943 FAM50BQ9Y247 325 aa20.49■□□□□ 0.87
PSPC1-202ENST00000427943 FSCN2O14926 492 aa20.48■□□□□ 0.87
PSPC1-202ENST00000427943 MBTPS2O43462 519 aa20.48■□□□□ 0.87
PSPC1-202ENST00000427943 ZC3H11AO75152 810 aaKnown RBP eCLIP20.48■□□□□ 0.87
PSPC1-202ENST00000427943 MED24O75448 989 aa20.48■□□□□ 0.87
PSPC1-202ENST00000427943 DGAT1O75907 488 aa20.48■□□□□ 0.87
PSPC1-202ENST00000427943 ERLIN2O94905 339 aa20.48■□□□□ 0.87
PSPC1-202ENST00000427943 SPATA31C1P0DKV0 1188 aa20.48■□□□□ 0.87
PSPC1-202ENST00000427943 RBM10P98175 930 aaKnown RBP20.48■□□□□ 0.87
PSPC1-202ENST00000427943 CAPSQ13938 189 aa20.48■□□□□ 0.87
PSPC1-202ENST00000427943 GJD3Q8N144 294 aa20.48■□□□□ 0.87
PSPC1-202ENST00000427943 TCF25Q9BQ70 676 aa20.48■□□□□ 0.87
PSPC1-202ENST00000427943 EPHX3Q9H6B9 360 aa20.48■□□□□ 0.87
PSPC1-202ENST00000427943 CLEC1BQ9P126 229 aa20.48■□□□□ 0.87
PSPC1-202ENST00000427943 LZTS1Q9Y250 596 aa20.48■□□□□ 0.87
PSPC1-202ENST00000427943 PCDHB2Q9Y5E7 798 aa20.48■□□□□ 0.87
PSPC1-202ENST00000427943 HOXA11P31270 313 aaPredicted RBP20.47■□□□□ 0.87
PSPC1-202ENST00000427943 BCAR1P56945 870 aa20.47■□□□□ 0.87
PSPC1-202ENST00000427943 SMAD4Q13485 552 aaKnown RBP20.47■□□□□ 0.87
PSPC1-202ENST00000427943 MXD4Q14582 209 aaPredicted RBP20.47■□□□□ 0.87
PSPC1-202ENST00000427943 UBXN11Q5T124 520 aa20.47■□□□□ 0.87
PSPC1-202ENST00000427943 POTEGQ6S5H5 508 aa20.47■□□□□ 0.87
PSPC1-202ENST00000427943 GLB1LQ6UWU2 654 aa20.47■□□□□ 0.87
PSPC1-202ENST00000427943 MAEAQ7L5Y9 396 aa20.47■□□□□ 0.87
PSPC1-202ENST00000427943 CATSPER3Q86XQ3 398 aa20.47■□□□□ 0.87
PSPC1-202ENST00000427943 MSLNLQ96KJ4 702 aa20.47■□□□□ 0.87
PSPC1-202ENST00000427943 GBP3Q9H0R5 595 aa20.47■□□□□ 0.87
PSPC1-202ENST00000427943 POLR3FQ9H1D9 316 aaPredicted RBP20.47■□□□□ 0.87
PSPC1-202ENST00000427943 TUFT1Q9NNX1 390 aa20.47■□□□□ 0.87
PSPC1-202ENST00000427943 PUF60Q9UHX1 559 aaKnown RBP20.47■□□□□ 0.87
PSPC1-202ENST00000427943 NOL7Q9UMY1 257 aaKnown RBP20.47■□□□□ 0.87
PSPC1-202ENST00000427943 INO80B-WBP1J3KQ70 363 aa20.46■□□□□ 0.87
PSPC1-202ENST00000427943 ST18O60284 1047 aa20.46■□□□□ 0.87
PSPC1-202ENST00000427943 TSPAN1O60635 241 aa20.46■□□□□ 0.87
PSPC1-202ENST00000427943 ZNF623O75123 536 aa20.46■□□□□ 0.87
PSPC1-202ENST00000427943 OFD1O75665 1012 aa20.46■□□□□ 0.87
PSPC1-202ENST00000427943 CD2BP2O95400 341 aaKnown RBP20.46■□□□□ 0.87
PSPC1-202ENST00000427943 GLRA2P23416 452 aa20.46■□□□□ 0.87
PSPC1-202ENST00000427943 PTENP60484 403 aa20.46■□□□□ 0.87
PSPC1-202ENST00000427943 KRT17Q04695 432 aa20.46■□□□□ 0.87
PSPC1-202ENST00000427943 ORC2Q13416 577 aaPredicted RBP20.46■□□□□ 0.87
PSPC1-202ENST00000427943 TFDP1Q14186 410 aa20.46■□□□□ 0.87
PSPC1-202ENST00000427943 DUSP6Q16828 381 aa20.46■□□□□ 0.87
PSPC1-202ENST00000427943 NOMO2Q5JPE7 1267 aa20.46■□□□□ 0.87
PSPC1-202ENST00000427943 PDE12Q6L8Q7 609 aaKnown RBP20.46■□□□□ 0.87
PSPC1-202ENST00000427943 AGMOQ6ZNB7 445 aa20.46■□□□□ 0.87
PSPC1-202ENST00000427943 VN1R2Q8NFZ6 395 aa20.46■□□□□ 0.87
PSPC1-202ENST00000427943 PGBD4Q96DM1 585 aa20.46■□□□□ 0.87
PSPC1-202ENST00000427943 CPB2Q96IY4 423 aa20.46■□□□□ 0.87
PSPC1-202ENST00000427943 GPRC5CQ9NQ84 441 aa20.46■□□□□ 0.87
PSPC1-202ENST00000427943 TBC1D13Q9NVG8 400 aa20.46■□□□□ 0.87
PSPC1-202ENST00000427943 HIDE1A8MVS5 230 aa20.45■□□□□ 0.86
PSPC1-202ENST00000427943 ARL2P36404 184 aa20.45■□□□□ 0.86
PSPC1-202ENST00000427943 ALDH7A1P49419 539 aaKnown RBP20.45■□□□□ 0.86
PSPC1-202ENST00000427943 RNASELQ05823 741 aaKnown RBP20.45■□□□□ 0.86
PSPC1-202ENST00000427943 ZP2Q05996 745 aa20.45■□□□□ 0.86
PSPC1-202ENST00000427943 SMAD2Q15796 467 aaKnown RBP20.45■□□□□ 0.86
PSPC1-202ENST00000427943 TMC7Q7Z402 723 aa20.45■□□□□ 0.86
PSPC1-202ENST00000427943 TMEM173Q86WV6 379 aaPredicted RBP20.45■□□□□ 0.86
PSPC1-202ENST00000427943 EIF2AQ9BY44 585 aaKnown RBP20.45■□□□□ 0.86
PSPC1-202ENST00000427943 NRDE2Q9H7Z3 1164 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms