RNA–Protein interactions for RNA: ENST00000426678.1

NCKIPSD-205, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 5

Gene NCKIPSD, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-205ENST00000426678 PP2D1A8MPX8 630 aa16.13■□□□□ 0.17
NCKIPSD-205ENST00000426678 GRM6O15303 877 aa16.13■□□□□ 0.17
NCKIPSD-205ENST00000426678 CSPG5O95196 566 aa16.13■□□□□ 0.17
NCKIPSD-205ENST00000426678 BMP15O95972 392 aa16.13■□□□□ 0.17
NCKIPSD-205ENST00000426678 ATF7P17544 494 aaPredicted RBP16.13■□□□□ 0.17
NCKIPSD-205ENST00000426678 GLRA2P23416 452 aa16.13■□□□□ 0.17
NCKIPSD-205ENST00000426678 MRPS5P82675 430 aaKnown RBP16.13■□□□□ 0.17
NCKIPSD-205ENST00000426678 CSPP1Q1MSJ5 1256 aa16.13■□□□□ 0.17
NCKIPSD-205ENST00000426678 IFNLR1Q8IU57 520 aaPredicted RBP16.13■□□□□ 0.17
NCKIPSD-205ENST00000426678 KLHL23Q8NBE8 558 aa16.13■□□□□ 0.17
NCKIPSD-205ENST00000426678 HELQQ8TDG4 1101 aa16.13■□□□□ 0.17
NCKIPSD-205ENST00000426678 RSPH1Q8WYR4 309 aa16.13■□□□□ 0.17
NCKIPSD-205ENST00000426678 HLA-CQ95604 372 aa16.13■□□□□ 0.17
NCKIPSD-205ENST00000426678 CASD1Q96PB1 797 aa16.13■□□□□ 0.17
NCKIPSD-205ENST00000426678 MRPL9Q9BYD2 267 aaKnown RBP16.13■□□□□ 0.17
NCKIPSD-205ENST00000426678 BHMT2Q9H2M3 363 aa16.13■□□□□ 0.17
NCKIPSD-205ENST00000426678 NSUN3Q9H649 340 aaKnown RBP16.13■□□□□ 0.17
NCKIPSD-205ENST00000426678 GPRC5CQ9NQ84 441 aa16.13■□□□□ 0.17
NCKIPSD-205ENST00000426678 PLAGL2Q9UPG8 496 aa16.13■□□□□ 0.17
NCKIPSD-205ENST00000426678 UNC80Q8N2C7 3258 aa16.13■□□□□ 0.17
NCKIPSD-205ENST00000426678 VWA3AA6NCI4 1184 aa16.12■□□□□ 0.17
NCKIPSD-205ENST00000426678 DLL1O00548 723 aa16.12■□□□□ 0.17
NCKIPSD-205ENST00000426678 ITGB1P05556 798 aa16.12■□□□□ 0.17
NCKIPSD-205ENST00000426678 CYP11B2P19099 503 aa16.12■□□□□ 0.17
NCKIPSD-205ENST00000426678 AXLP30530 894 aa16.12■□□□□ 0.17
NCKIPSD-205ENST00000426678 IL17AQ16552 155 aa16.12■□□□□ 0.17
NCKIPSD-205ENST00000426678 ECM1Q16610 540 aa16.12■□□□□ 0.17
NCKIPSD-205ENST00000426678 CLLU1OSQ5K130 101 aa16.12■□□□□ 0.17
NCKIPSD-205ENST00000426678 ARL6IP4Q66PJ3 421 aaKnown RBP16.12■□□□□ 0.17
NCKIPSD-205ENST00000426678 GLB1LQ6UWU2 654 aa16.12■□□□□ 0.17
NCKIPSD-205ENST00000426678 ZBTB8OSQ8IWT0 167 aa16.12■□□□□ 0.17
NCKIPSD-205ENST00000426678 THNSL1Q8IYQ7 743 aa16.12■□□□□ 0.17
NCKIPSD-205ENST00000426678 COLGALT1Q8NBJ5 622 aa16.12■□□□□ 0.17
NCKIPSD-205ENST00000426678 SYMPKQ92797 1274 aaKnown RBP16.12■□□□□ 0.17
NCKIPSD-205ENST00000426678 PGBD4Q96DM1 585 aa16.12■□□□□ 0.17
NCKIPSD-205ENST00000426678 CCDC51Q96ER9 411 aa16.12■□□□□ 0.17
NCKIPSD-205ENST00000426678 ASB2Q96Q27 587 aa16.12■□□□□ 0.17
NCKIPSD-205ENST00000426678 NFKBIZQ9BYH8 718 aa16.12■□□□□ 0.17
NCKIPSD-205ENST00000426678 FOXD4L1Q9NU39 408 aa16.12■□□□□ 0.17
NCKIPSD-205ENST00000426678 HCSTQ9UBK5 93 aa16.12■□□□□ 0.17
NCKIPSD-205ENST00000426678 DNM3Q9UQ16 869 aa16.12■□□□□ 0.17
NCKIPSD-205ENST00000426678 ATG2AQ2TAZ0 1938 aa16.11■□□□□ 0.17
NCKIPSD-205ENST00000426678 TSPAN1O60635 241 aa16.11■□□□□ 0.17
NCKIPSD-205ENST00000426678 ZNF623O75123 536 aa16.11■□□□□ 0.17
NCKIPSD-205ENST00000426678 CDC25AP30304 524 aa16.11■□□□□ 0.17
NCKIPSD-205ENST00000426678 HOXA11P31270 313 aaPredicted RBP16.11■□□□□ 0.17
NCKIPSD-205ENST00000426678 TFF2Q03403 129 aa16.11■□□□□ 0.17
NCKIPSD-205ENST00000426678 MBTD1Q05BQ5 628 aa16.11■□□□□ 0.17
NCKIPSD-205ENST00000426678 ZRSR1Q15695 479 aaKnown RBP16.11■□□□□ 0.17
NCKIPSD-205ENST00000426678 LONRF3Q496Y0 759 aa16.11■□□□□ 0.17
NCKIPSD-205ENST00000426678 TCEAL5Q5H9L2 206 aa16.11■□□□□ 0.17
NCKIPSD-205ENST00000426678 NOTUMQ6P988 496 aa16.11■□□□□ 0.17
NCKIPSD-205ENST00000426678 HSCBQ8IWL3 235 aa16.11■□□□□ 0.17
NCKIPSD-205ENST00000426678 LPPQ93052 612 aa16.11■□□□□ 0.17
NCKIPSD-205ENST00000426678 PPP2R3CQ969Q6 453 aa16.11■□□□□ 0.17
NCKIPSD-205ENST00000426678 CDK5RAP3Q96JB5 506 aa16.11■□□□□ 0.17
NCKIPSD-205ENST00000426678 ZNF558Q96NG5 402 aa16.11■□□□□ 0.17
NCKIPSD-205ENST00000426678 C2orf40Q9H1Z8 148 aa16.11■□□□□ 0.17
NCKIPSD-205ENST00000426678 CWH43Q9H720 699 aa16.11■□□□□ 0.17
NCKIPSD-205ENST00000426678 PCDHB2Q9Y5E7 798 aa16.11■□□□□ 0.17
NCKIPSD-205ENST00000426678 PLXNA4Q9HCM2 1894 aa16.1■□□□□ 0.17
NCKIPSD-205ENST00000426678 E9PMD0 336 aa16.1■□□□□ 0.17
NCKIPSD-205ENST00000426678 FGF18O76093 207 aa16.1■□□□□ 0.17
NCKIPSD-205ENST00000426678 EYA4O95677 639 aa16.1■□□□□ 0.17
NCKIPSD-205ENST00000426678 SYT1P21579 422 aa16.1■□□□□ 0.17
NCKIPSD-205ENST00000426678 PPM1AP35813 382 aa16.1■□□□□ 0.17
NCKIPSD-205ENST00000426678 PPP2R5AQ15172 486 aa16.1■□□□□ 0.17
NCKIPSD-205ENST00000426678 CNNM3Q8NE01 707 aa16.1■□□□□ 0.17
NCKIPSD-205ENST00000426678 DEPTORQ8TB45 409 aa16.1■□□□□ 0.17
NCKIPSD-205ENST00000426678 SPPL3Q8TCT6 385 aa16.1■□□□□ 0.17
NCKIPSD-205ENST00000426678 POF1BQ8WVV4 589 aa16.1■□□□□ 0.17
NCKIPSD-205ENST00000426678 KIFAP3Q92845 792 aa16.1■□□□□ 0.17
NCKIPSD-205ENST00000426678 SNX21Q969T3 373 aa16.1■□□□□ 0.17
NCKIPSD-205ENST00000426678 CPB2Q96IY4 423 aa16.1■□□□□ 0.17
NCKIPSD-205ENST00000426678 IFT74Q96LB3 600 aa16.1■□□□□ 0.17
NCKIPSD-205ENST00000426678 MMTAG2Q9BU76 263 aaKnown RBP16.1■□□□□ 0.17
NCKIPSD-205ENST00000426678 COL25A1Q9BXS0 654 aaPredicted RBP16.1■□□□□ 0.17
NCKIPSD-205ENST00000426678 NT5C3AQ9H0P0 336 aa16.1■□□□□ 0.17
NCKIPSD-205ENST00000426678 UBE2ZQ9H832 354 aaPredicted RBP16.1■□□□□ 0.17
NCKIPSD-205ENST00000426678 INPP5FQ9Y2H2 1132 aa16.1■□□□□ 0.17
NCKIPSD-205ENST00000426678 REV3LO60673 3130 aa16.1■□□□□ 0.17
NCKIPSD-205ENST00000426678 HSP90AA1P07900 732 aaKnown RBP16.09■□□□□ 0.17
NCKIPSD-205ENST00000426678 NAMPTP43490 491 aa16.09■□□□□ 0.17
NCKIPSD-205ENST00000426678 UBE3AQ05086 875 aa16.09■□□□□ 0.17
NCKIPSD-205ENST00000426678 SF3A1Q15459 793 aaKnown RBP16.09■□□□□ 0.17
NCKIPSD-205ENST00000426678 NOMO2Q5JPE7 1267 aa16.09■□□□□ 0.17
NCKIPSD-205ENST00000426678 CDCA2Q69YH5 1023 aaPredicted RBP16.09■□□□□ 0.17
NCKIPSD-205ENST00000426678 KCNT2Q6UVM3 1135 aa16.09■□□□□ 0.17
NCKIPSD-205ENST00000426678 LRRC55Q6ZSA7 311 aa16.09■□□□□ 0.17
NCKIPSD-205ENST00000426678 HACE1Q8IYU2 909 aa16.09■□□□□ 0.17
NCKIPSD-205ENST00000426678 URGCPQ8TCY9 931 aa16.09■□□□□ 0.17
NCKIPSD-205ENST00000426678 TRIM6Q9C030 488 aaPredicted RBP16.09■□□□□ 0.17
NCKIPSD-205ENST00000426678 CSRNP2Q9H175 543 aa16.09■□□□□ 0.17
NCKIPSD-205ENST00000426678 PRMT7Q9NVM4 692 aaPredicted RBP16.09■□□□□ 0.17
NCKIPSD-205ENST00000426678 CNTNAP2Q9UHC6 1331 aa16.09■□□□□ 0.17
NCKIPSD-205ENST00000426678 MEIS3P2A8K0S8 358 aa16.08■□□□□ 0.16
NCKIPSD-205ENST00000426678 B4GALT5O43286 388 aa16.08■□□□□ 0.16
NCKIPSD-205ENST00000426678 ITGA4P13612 1032 aa16.08■□□□□ 0.16
NCKIPSD-205ENST00000426678 ARF4P18085 180 aaPredicted RBP16.08■□□□□ 0.16
NCKIPSD-205ENST00000426678 NCLP19338 710 aaKnown RBP16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms