RNA–Protein interactions for RNA: ENST00000421862.1

AC004540.1-203, humanhuman

TSL 5 BASIC

Gene AC004540.1, Length 907 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-203ENST00000421862 AGPAT5Q9NUQ2 364 aa20.9■□□□□ 0.94
AC004540.1-203ENST00000421862 TBC1D13Q9NVG8 400 aa20.9■□□□□ 0.94
AC004540.1-203ENST00000421862 PPME1Q9Y570 386 aa20.9■□□□□ 0.94
AC004540.1-203ENST00000421862 STK36Q9NRP7 1315 aa20.89■□□□□ 0.93
AC004540.1-203ENST00000421862 MEIS3P2A8K0S8 358 aa20.89■□□□□ 0.93
AC004540.1-203ENST00000421862 NT5C1B-RDH14C9J2C7 533 aa20.89■□□□□ 0.93
AC004540.1-203ENST00000421862 EML1O00423 815 aa20.89■□□□□ 0.93
AC004540.1-203ENST00000421862 ZC3H11AO75152 810 aaKnown RBP eCLIP20.89■□□□□ 0.93
AC004540.1-203ENST00000421862 PTPN5P54829 565 aa20.89■□□□□ 0.93
AC004540.1-203ENST00000421862 TCF15Q12870 199 aa20.89■□□□□ 0.93
AC004540.1-203ENST00000421862 BCL7CQ8WUZ0 217 aaPredicted RBP20.89■□□□□ 0.93
AC004540.1-203ENST00000421862 LPPQ93052 612 aa20.89■□□□□ 0.93
AC004540.1-203ENST00000421862 IGSF21Q96ID5 467 aa20.89■□□□□ 0.93
AC004540.1-203ENST00000421862 NRDE2Q9H7Z3 1164 aa20.89■□□□□ 0.93
AC004540.1-203ENST00000421862 CYP26B1Q9NR63 512 aa20.89■□□□□ 0.93
AC004540.1-203ENST00000421862 NR2E1Q9Y466 385 aa20.89■□□□□ 0.93
AC004540.1-203ENST00000421862 CTSAP10619 480 aa20.88■□□□□ 0.93
AC004540.1-203ENST00000421862 GCFC2P16383 781 aaKnown RBP20.88■□□□□ 0.93
AC004540.1-203ENST00000421862 QARSP47897 775 aaKnown RBP20.88■□□□□ 0.93
AC004540.1-203ENST00000421862 GIT2Q14161 759 aa20.88■□□□□ 0.93
AC004540.1-203ENST00000421862 NOMO2Q5JPE7 1267 aa20.88■□□□□ 0.93
AC004540.1-203ENST00000421862 PPP4R3AQ6IN85 833 aa20.88■□□□□ 0.93
AC004540.1-203ENST00000421862 CPLX2Q6PUV4 134 aaKnown RBP20.88■□□□□ 0.93
AC004540.1-203ENST00000421862 GLB1LQ6UWU2 654 aa20.88■□□□□ 0.93
AC004540.1-203ENST00000421862 DDX53Q86TM3 631 aaKnown RBP20.88■□□□□ 0.93
AC004540.1-203ENST00000421862 KSR1Q8IVT5 923 aa20.88■□□□□ 0.93
AC004540.1-203ENST00000421862 VPS52Q8N1B4 723 aa20.88■□□□□ 0.93
AC004540.1-203ENST00000421862 FAM20AQ96MK3 541 aa20.88■□□□□ 0.93
AC004540.1-203ENST00000421862 NLRP4Q96MN2 994 aa20.88■□□□□ 0.93
AC004540.1-203ENST00000421862 DHX33Q9H6R0 707 aaKnown RBP20.88■□□□□ 0.93
AC004540.1-203ENST00000421862 DZANK1Q9NVP4 752 aa20.88■□□□□ 0.93
AC004540.1-203ENST00000421862 WRAP73Q9P2S5 460 aaPredicted RBP20.88■□□□□ 0.93
AC004540.1-203ENST00000421862 COL4A3BPQ9Y5P4 624 aa20.88■□□□□ 0.93
AC004540.1-203ENST00000421862 MTCL1Q9Y4B5 1905 aaKnown RBP20.87■□□□□ 0.93
AC004540.1-203ENST00000421862 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.87■□□□□ 0.93
AC004540.1-203ENST00000421862 DDX11L8A8MPP1 907 aa20.87■□□□□ 0.93
AC004540.1-203ENST00000421862 B4GALT3O60512 393 aa20.87■□□□□ 0.93
AC004540.1-203ENST00000421862 OFD1O75665 1012 aa20.87■□□□□ 0.93
AC004540.1-203ENST00000421862 VCPP55072 806 aaKnown RBP20.87■□□□□ 0.93
AC004540.1-203ENST00000421862 KIAA1841Q6NSI8 718 aa20.87■□□□□ 0.93
AC004540.1-203ENST00000421862 CES5AQ6NT32 575 aa20.87■□□□□ 0.93
AC004540.1-203ENST00000421862 CATSPER4Q7RTX7 472 aa20.87■□□□□ 0.93
AC004540.1-203ENST00000421862 NEK8Q86SG6 692 aa20.87■□□□□ 0.93
AC004540.1-203ENST00000421862 VN1R3Q9BXE9 311 aa20.87■□□□□ 0.93
AC004540.1-203ENST00000421862 KCNJ14Q9UNX9 436 aa20.87■□□□□ 0.93
AC004540.1-203ENST00000421862 MYO15AQ9UKN7 3530 aa20.86■□□□□ 0.93
AC004540.1-203ENST00000421862 C2CD4DB7Z1M9 353 aa20.86■□□□□ 0.93
AC004540.1-203ENST00000421862 TBX3O15119 743 aa20.86■□□□□ 0.93
AC004540.1-203ENST00000421862 DKC1O60832 514 aaKnown RBP eCLIP20.86■□□□□ 0.93
AC004540.1-203ENST00000421862 GALTP07902 379 aa20.86■□□□□ 0.93
AC004540.1-203ENST00000421862 SP100P23497 879 aaPredicted RBP20.86■□□□□ 0.93
AC004540.1-203ENST00000421862 MTHFRP42898 656 aa20.86■□□□□ 0.93
AC004540.1-203ENST00000421862 NPEPPSP55786 919 aa20.86■□□□□ 0.93
AC004540.1-203ENST00000421862 SCRN1Q12765 414 aa20.86■□□□□ 0.93
AC004540.1-203ENST00000421862 STK3Q13188 491 aa20.86■□□□□ 0.93
AC004540.1-203ENST00000421862 BMS1Q14692 1282 aaKnown RBP20.86■□□□□ 0.93
AC004540.1-203ENST00000421862 LETM2Q2VYF4 491 aa20.86■□□□□ 0.93
AC004540.1-203ENST00000421862 SLC7A3Q8WY07 619 aa20.86■□□□□ 0.93
AC004540.1-203ENST00000421862 HAS1Q92839 578 aa20.86■□□□□ 0.93
AC004540.1-203ENST00000421862 PHOX2BQ99453 314 aa20.86■□□□□ 0.93
AC004540.1-203ENST00000421862 LARP6Q9BRS8 491 aaKnown RBP20.86■□□□□ 0.93
AC004540.1-203ENST00000421862 DNAJB4Q9UDY4 337 aa20.86■□□□□ 0.93
AC004540.1-203ENST00000421862 GAS2O43903 313 aaKnown RBP20.85■□□□□ 0.93
AC004540.1-203ENST00000421862 CDKL5O76039 1030 aa20.85■□□□□ 0.93
AC004540.1-203ENST00000421862 P4HBP07237 508 aaKnown RBP20.85■□□□□ 0.93
AC004540.1-203ENST00000421862 RFC5P40937 340 aa20.85■□□□□ 0.93
AC004540.1-203ENST00000421862 SLC11A1P49279 550 aa20.85■□□□□ 0.93
AC004540.1-203ENST00000421862 SPIRE1Q08AE8 756 aa20.85■□□□□ 0.93
AC004540.1-203ENST00000421862 PTPN14Q15678 1187 aa20.85■□□□□ 0.93
AC004540.1-203ENST00000421862 AGMOQ6ZNB7 445 aa20.85■□□□□ 0.93
AC004540.1-203ENST00000421862 MRPL10Q7Z7H8 261 aaKnown RBP20.85■□□□□ 0.93
AC004540.1-203ENST00000421862 C4orf19Q8IY42 314 aa20.85■□□□□ 0.93
AC004540.1-203ENST00000421862 ZNF579Q8NAF0 562 aaKnown RBP20.85■□□□□ 0.93
AC004540.1-203ENST00000421862 SLC22A17Q8WUG5 538 aa20.85■□□□□ 0.93
AC004540.1-203ENST00000421862 AUTS2Q8WXX7 1259 aa20.85■□□□□ 0.93
AC004540.1-203ENST00000421862 RIPOR3Q96MK2 946 aa20.85■□□□□ 0.93
AC004540.1-203ENST00000421862 SORCS3Q9UPU3 1222 aa20.85■□□□□ 0.93
AC004540.1-203ENST00000421862 PCDHB2Q9Y5E7 798 aa20.85■□□□□ 0.93
AC004540.1-203ENST00000421862 CNTNAP2Q9UHC6 1331 aa20.84■□□□□ 0.93
AC004540.1-203ENST00000421862 CCDC194A0A1B0GVG4 234 aa20.84■□□□□ 0.93
AC004540.1-203ENST00000421862 CXCL14O95715 111 aa20.84■□□□□ 0.93
AC004540.1-203ENST00000421862 EPCAMP16422 314 aa20.84■□□□□ 0.93
AC004540.1-203ENST00000421862 MTMR3Q13615 1198 aa20.84■□□□□ 0.93
AC004540.1-203ENST00000421862 LONRF3Q496Y0 759 aa20.84■□□□□ 0.93
AC004540.1-203ENST00000421862 UBXN11Q5T124 520 aa20.84■□□□□ 0.93
AC004540.1-203ENST00000421862 SRGAP1Q7Z6B7 1085 aa20.84■□□□□ 0.93
AC004540.1-203ENST00000421862 EXOC8Q8IYI6 725 aa20.84■□□□□ 0.93
AC004540.1-203ENST00000421862 UBALD2Q8IYN6 164 aa20.84■□□□□ 0.93
AC004540.1-203ENST00000421862 KREMEN2Q8NCW0 462 aa20.84■□□□□ 0.93
AC004540.1-203ENST00000421862 PSPC1Q8WXF1 523 aaKnown RBP20.84■□□□□ 0.93
AC004540.1-203ENST00000421862 PGBD4Q96DM1 585 aa20.84■□□□□ 0.93
AC004540.1-203ENST00000421862 LXNQ9BS40 222 aa20.84■□□□□ 0.93
AC004540.1-203ENST00000421862 MINDY3Q9H8M7 445 aa20.84■□□□□ 0.93
AC004540.1-203ENST00000421862 STK39Q9UEW8 545 aa20.84■□□□□ 0.93
AC004540.1-203ENST00000421862 INPP5FQ9Y2H2 1132 aa20.84■□□□□ 0.93
AC004540.1-203ENST00000421862 HOXA11P31270 313 aaPredicted RBP20.83■□□□□ 0.93
AC004540.1-203ENST00000421862 RARS2Q5T160 578 aaKnown RBP20.83■□□□□ 0.93
AC004540.1-203ENST00000421862 ZNF280BQ86YH2 543 aa20.83■□□□□ 0.93
AC004540.1-203ENST00000421862 ZDHHC14Q8IZN3 488 aa20.83■□□□□ 0.93
AC004540.1-203ENST00000421862 PRPF31Q8WWY3 499 aaKnown RBP20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms