RNA–Protein interactions for RNA: ENST00000421712.1

BRAT1-202, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-202ENST00000421712 LRRC15Q8TF66 581 aa17.42■□□□□ 0.38
BRAT1-202ENST00000421712 LINC01599Q8WXQ3 324 aa17.42■□□□□ 0.38
BRAT1-202ENST00000421712 BSNDQ8WZ55 320 aa17.42■□□□□ 0.38
BRAT1-202ENST00000421712 YME1L1Q96TA2 773 aa17.42■□□□□ 0.38
BRAT1-202ENST00000421712 C2orf40Q9H1Z8 148 aa17.42■□□□□ 0.38
BRAT1-202ENST00000421712 ZHX3Q9H4I2 956 aa17.42■□□□□ 0.38
BRAT1-202ENST00000421712 GDPD2Q9HCC8 539 aa17.42■□□□□ 0.38
BRAT1-202ENST00000421712 RGS18Q9NS28 235 aa17.42■□□□□ 0.38
BRAT1-202ENST00000421712 RNF216Q9NWF9 866 aaPredicted RBP17.42■□□□□ 0.38
BRAT1-202ENST00000421712 DACT1Q9NYF0 836 aa17.42■□□□□ 0.38
BRAT1-202ENST00000421712 TCHHQ07283 1943 aa17.42■□□□□ 0.38
BRAT1-202ENST00000421712 GJB5O95377 273 aa17.41■□□□□ 0.38
BRAT1-202ENST00000421712 SARSP49591 514 aaKnown RBP17.41■□□□□ 0.38
BRAT1-202ENST00000421712 ARSHQ5FYA8 562 aa17.41■□□□□ 0.38
BRAT1-202ENST00000421712 DHX58Q96C10 678 aa17.41■□□□□ 0.38
BRAT1-202ENST00000421712 RAD9AQ99638 391 aa17.41■□□□□ 0.38
BRAT1-202ENST00000421712 NKX2-4Q9H2Z4 354 aa17.41■□□□□ 0.38
BRAT1-202ENST00000421712 KMT5AQ9NQR1 393 aa17.41■□□□□ 0.38
BRAT1-202ENST00000421712 CHST12Q9NRB3 414 aa17.41■□□□□ 0.38
BRAT1-202ENST00000421712 INSL6Q9Y581 213 aa17.41■□□□□ 0.38
BRAT1-202ENST00000421712 A0A087X0B3 334 aa17.4■□□□□ 0.38
BRAT1-202ENST00000421712 POLR2DO15514 142 aaKnown RBP17.4■□□□□ 0.38
BRAT1-202ENST00000421712 FAM13AO94988 1023 aa17.4■□□□□ 0.38
BRAT1-202ENST00000421712 MBTD1Q05BQ5 628 aa17.4■□□□□ 0.38
BRAT1-202ENST00000421712 DSC3Q14574 896 aa17.4■□□□□ 0.38
BRAT1-202ENST00000421712 MAPK6Q16659 721 aa17.4■□□□□ 0.38
BRAT1-202ENST00000421712 ZNF697Q5TEC3 545 aa17.4■□□□□ 0.38
BRAT1-202ENST00000421712 DYMQ7RTS9 669 aa17.4■□□□□ 0.38
BRAT1-202ENST00000421712 IFNLR1Q8IU57 520 aaPredicted RBP17.4■□□□□ 0.38
BRAT1-202ENST00000421712 NPAS4Q8IUM7 802 aa17.4■□□□□ 0.38
BRAT1-202ENST00000421712 IQUBQ8NA54 791 aa17.4■□□□□ 0.38
BRAT1-202ENST00000421712 RNF169Q8NCN4 708 aa17.4■□□□□ 0.38
BRAT1-202ENST00000421712 KIFC3Q9BVG8 833 aa17.4■□□□□ 0.38
BRAT1-202ENST00000421712 NFKBIZQ9BYH8 718 aa17.4■□□□□ 0.38
BRAT1-202ENST00000421712 C17orf75Q9HAS0 396 aa17.4■□□□□ 0.38
BRAT1-202ENST00000421712 SLC28A3Q9HAS3 691 aa17.4■□□□□ 0.38
BRAT1-202ENST00000421712 TSHZ2Q9NRE2 1034 aa17.4■□□□□ 0.38
BRAT1-202ENST00000421712 AGPAT5Q9NUQ2 364 aa17.4■□□□□ 0.38
BRAT1-202ENST00000421712 CHMP5Q9NZZ3 219 aa17.4■□□□□ 0.38
BRAT1-202ENST00000421712 KCNG1Q9UIX4 513 aa17.4■□□□□ 0.38
BRAT1-202ENST00000421712 YBX2Q9Y2T7 364 aaKnown RBP17.4■□□□□ 0.38
BRAT1-202ENST00000421712 GOLGA6L4A6NEF3 574 aa17.39■□□□□ 0.37
BRAT1-202ENST00000421712 C9IYK1 514 aa17.39■□□□□ 0.37
BRAT1-202ENST00000421712 TBCAO75347 108 aaKnown RBP17.39■□□□□ 0.37
BRAT1-202ENST00000421712 CA3P07451 260 aa17.39■□□□□ 0.37
BRAT1-202ENST00000421712 NPTX2P47972 431 aa17.39■□□□□ 0.37
BRAT1-202ENST00000421712 EFNA5P52803 228 aa17.39■□□□□ 0.37
BRAT1-202ENST00000421712 SMTNP53814 917 aa17.39■□□□□ 0.37
BRAT1-202ENST00000421712 PCBP1Q15365 356 aaKnown RBP eCLIP17.39■□□□□ 0.37
BRAT1-202ENST00000421712 NAALADL2Q58DX5 795 aa17.39■□□□□ 0.37
BRAT1-202ENST00000421712 RESP18Q5W5W9 173 aa17.39■□□□□ 0.37
BRAT1-202ENST00000421712 PPP2R2DQ66LE6 453 aa17.39■□□□□ 0.37
BRAT1-202ENST00000421712 ADALQ6DHV7 355 aa17.39■□□□□ 0.37
BRAT1-202ENST00000421712 DAW1Q8N136 415 aa17.39■□□□□ 0.37
BRAT1-202ENST00000421712 MYCT1Q8N699 235 aa17.39■□□□□ 0.37
BRAT1-202ENST00000421712 CPB2Q96IY4 423 aa17.39■□□□□ 0.37
BRAT1-202ENST00000421712 FAM161BQ96MY7 647 aa17.39■□□□□ 0.37
BRAT1-202ENST00000421712 REEP2Q9BRK0 252 aa17.39■□□□□ 0.37
BRAT1-202ENST00000421712 PRMT7Q9NVM4 692 aaPredicted RBP17.39■□□□□ 0.37
BRAT1-202ENST00000421712 LARSQ9P2J5 1176 aaKnown RBP17.39■□□□□ 0.37
BRAT1-202ENST00000421712 KCNH3Q9ULD8 1083 aa17.39■□□□□ 0.37
BRAT1-202ENST00000421712 ODF2LQ9ULJ1 636 aa17.39■□□□□ 0.37
BRAT1-202ENST00000421712 LAMA2P24043 3122 aaKnown RBP17.38■□□□□ 0.37
BRAT1-202ENST00000421712 TTC3P53804 2025 aa17.38■□□□□ 0.37
BRAT1-202ENST00000421712 K7ERI5 159 aa17.38■□□□□ 0.37
BRAT1-202ENST00000421712 SLC16A4O15374 487 aa17.38■□□□□ 0.37
BRAT1-202ENST00000421712 TSPAN1O60635 241 aa17.38■□□□□ 0.37
BRAT1-202ENST00000421712 PRKCBP05771 671 aa17.38■□□□□ 0.37
BRAT1-202ENST00000421712 SKIP12755 728 aa17.38■□□□□ 0.37
BRAT1-202ENST00000421712 PLS3P13797 630 aa17.38■□□□□ 0.37
BRAT1-202ENST00000421712 CMA1P23946 247 aa17.38■□□□□ 0.37
BRAT1-202ENST00000421712 AXLP30530 894 aa17.38■□□□□ 0.37
BRAT1-202ENST00000421712 MAPK7Q13164 816 aa17.38■□□□□ 0.37
BRAT1-202ENST00000421712 GIT2Q14161 759 aa17.38■□□□□ 0.37
BRAT1-202ENST00000421712 CDCA2Q69YH5 1023 aaPredicted RBP17.38■□□□□ 0.37
BRAT1-202ENST00000421712 NOTUMQ6P988 496 aa17.38■□□□□ 0.37
BRAT1-202ENST00000421712 STAMQ92783 540 aa17.38■□□□□ 0.37
BRAT1-202ENST00000421712 PYM1Q9BRP8 204 aaKnown RBP17.38■□□□□ 0.37
BRAT1-202ENST00000421712 CUEDC2Q9H467 287 aa17.38■□□□□ 0.37
BRAT1-202ENST00000421712 LAMA3Q16787 3333 aa17.38■□□□□ 0.37
BRAT1-202ENST00000421712 MYH11P35749 1972 aa17.37■□□□□ 0.37
BRAT1-202ENST00000421712 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.37■□□□□ 0.37
BRAT1-202ENST00000421712 A0A0U1RQF3 1178 aa17.37■□□□□ 0.37
BRAT1-202ENST00000421712 A0A1B0GVL5 298 aa17.37■□□□□ 0.37
BRAT1-202ENST00000421712 LCHNA4D1U4 455 aa17.37■□□□□ 0.37
BRAT1-202ENST00000421712 FAM189BP81408 668 aa17.37■□□□□ 0.37
BRAT1-202ENST00000421712 AMPD3Q01432 767 aa17.37■□□□□ 0.37
BRAT1-202ENST00000421712 PRPF4BQ13523 1007 aaKnown RBP17.37■□□□□ 0.37
BRAT1-202ENST00000421712 LONRF3Q496Y0 759 aa17.37■□□□□ 0.37
BRAT1-202ENST00000421712 GPR153Q6NV75 609 aa17.37■□□□□ 0.37
BRAT1-202ENST00000421712 ECHDC2Q86YB7 292 aa17.37■□□□□ 0.37
BRAT1-202ENST00000421712 CEP57L1Q8IYX8 460 aa17.37■□□□□ 0.37
BRAT1-202ENST00000421712 DDX12PQ92771 950 aa17.37■□□□□ 0.37
BRAT1-202ENST00000421712 TRIM6Q9C030 488 aaPredicted RBP17.37■□□□□ 0.37
BRAT1-202ENST00000421712 LRRC27Q9C0I9 530 aa17.37■□□□□ 0.37
BRAT1-202ENST00000421712 ZNF576Q9H609 170 aa17.37■□□□□ 0.37
BRAT1-202ENST00000421712 PARVGQ9HBI0 331 aa17.37■□□□□ 0.37
BRAT1-202ENST00000421712 TMEM161AQ9NX61 479 aa17.37■□□□□ 0.37
BRAT1-202ENST00000421712 GBF1Q92538 1859 aa17.37■□□□□ 0.37
BRAT1-202ENST00000421712 PTPRSQ13332 1948 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms