RNA–Protein interactions for RNA: ENST00000419459.1

LINC00642-201, long intergenic non-protein coding RNA 642, humanhuman

TSL 2 BASIC

Gene LINC00642, Length 2,026 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-201ENST00000419459 LGR5O75473 907 aa14.09□□□□□ -0.15
LINC00642-201ENST00000419459 IDEP14735 1019 aa14.09□□□□□ -0.15
LINC00642-201ENST00000419459 PBX1P40424 430 aa14.09□□□□□ -0.15
LINC00642-201ENST00000419459 CTCFP49711 727 aaPredicted RBP14.09□□□□□ -0.15
LINC00642-201ENST00000419459 ASIC1P78348 528 aa14.09□□□□□ -0.15
LINC00642-201ENST00000419459 FILIP1LQ4L180 1135 aa14.09□□□□□ -0.15
LINC00642-201ENST00000419459 ZNF569Q5MCW4 686 aa14.09□□□□□ -0.15
LINC00642-201ENST00000419459 FAM160B1Q5W0V3 765 aa14.09□□□□□ -0.15
LINC00642-201ENST00000419459 RINT1Q6NUQ1 792 aa14.09□□□□□ -0.15
LINC00642-201ENST00000419459 LRRC31Q6UY01 552 aa14.09□□□□□ -0.15
LINC00642-201ENST00000419459 TMTC1Q8IUR5 882 aa14.09□□□□□ -0.15
LINC00642-201ENST00000419459 SMYD4Q8IYR2 804 aaPredicted RBP14.09□□□□□ -0.15
LINC00642-201ENST00000419459 REEP2Q9BRK0 252 aa14.09□□□□□ -0.15
LINC00642-201ENST00000419459 UNC93B1Q9H1C4 597 aa14.09□□□□□ -0.15
LINC00642-201ENST00000419459 TUT1Q9H6E5 874 aaKnown RBP14.09□□□□□ -0.15
LINC00642-201ENST00000419459 LZTFL1Q9NQ48 299 aa14.09□□□□□ -0.15
LINC00642-201ENST00000419459 ERAP1Q9NZ08 941 aa14.09□□□□□ -0.15
LINC00642-201ENST00000419459 TRPC6Q9Y210 931 aa14.09□□□□□ -0.15
LINC00642-201ENST00000419459 ARHGEF35A5YM69 484 aa14.08□□□□□ -0.15
LINC00642-201ENST00000419459 MFAP3LO75121 409 aa14.08□□□□□ -0.15
LINC00642-201ENST00000419459 ADAMTS4O75173 837 aa14.08□□□□□ -0.15
LINC00642-201ENST00000419459 LYPLA2O95372 231 aa14.08□□□□□ -0.15
LINC00642-201ENST00000419459 MYL3P08590 195 aa14.08□□□□□ -0.15
LINC00642-201ENST00000419459 CPT1AP50416 773 aa14.08□□□□□ -0.15
LINC00642-201ENST00000419459 IGBP1P78318 339 aa14.08□□□□□ -0.15
LINC00642-201ENST00000419459 PLCB4Q15147 1175 aa14.08□□□□□ -0.15
LINC00642-201ENST00000419459 PADI6Q6TGC4 694 aa14.08□□□□□ -0.15
LINC00642-201ENST00000419459 CXCL17Q6UXB2 119 aa14.08□□□□□ -0.15
LINC00642-201ENST00000419459 RAD9BQ6WBX8 426 aa14.08□□□□□ -0.15
LINC00642-201ENST00000419459 ZHX3Q9H4I2 956 aa14.08□□□□□ -0.15
LINC00642-201ENST00000419459 SMARCAD1Q9H4L7 1026 aa14.08□□□□□ -0.15
LINC00642-201ENST00000419459 GPRC5CQ9NQ84 441 aa14.08□□□□□ -0.15
LINC00642-201ENST00000419459 CYP26B1Q9NR63 512 aa14.08□□□□□ -0.15
LINC00642-201ENST00000419459 KRT18P05783 430 aaKnown RBP14.08□□□□□ -0.16
LINC00642-201ENST00000419459 HOXD8P13378 290 aaPredicted RBP14.08□□□□□ -0.16
LINC00642-201ENST00000419459 MUTP22033 750 aa14.08□□□□□ -0.16
LINC00642-201ENST00000419459 GJA9P57773 515 aa14.08□□□□□ -0.16
LINC00642-201ENST00000419459 VSNL1P62760 191 aa14.08□□□□□ -0.16
LINC00642-201ENST00000419459 DNAJC21Q5F1R6 531 aaKnown RBP14.08□□□□□ -0.16
LINC00642-201ENST00000419459 XKR3Q5GH77 459 aa14.08□□□□□ -0.16
LINC00642-201ENST00000419459 SPATA1Q5VX52 437 aa14.08□□□□□ -0.16
LINC00642-201ENST00000419459 CTU1Q7Z7A3 348 aaKnown RBP14.08□□□□□ -0.16
LINC00642-201ENST00000419459 KAT2BQ92831 832 aa14.08□□□□□ -0.16
LINC00642-201ENST00000419459 DNAJC19Q96DA6 116 aa14.08□□□□□ -0.16
LINC00642-201ENST00000419459 RPGRIP1Q96KN7 1286 aa14.08□□□□□ -0.16
LINC00642-201ENST00000419459 DEF6Q9H4E7 631 aa14.08□□□□□ -0.16
LINC00642-201ENST00000419459 A0A087WUV0 522 aaPredicted RBP14.07□□□□□ -0.16
LINC00642-201ENST00000419459 ZBTB42B2RXF5 422 aa14.07□□□□□ -0.16
LINC00642-201ENST00000419459 GTPBP6O43824 516 aaPredicted RBP14.07□□□□□ -0.16
LINC00642-201ENST00000419459 PURAQ00577 322 aaKnown RBP14.07□□□□□ -0.16
LINC00642-201ENST00000419459 TRIM14Q14142 442 aa14.07□□□□□ -0.16
LINC00642-201ENST00000419459 MTF1Q14872 753 aa14.07□□□□□ -0.16
LINC00642-201ENST00000419459 KIAA0753Q2KHM9 967 aa14.07□□□□□ -0.16
LINC00642-201ENST00000419459 LHX8Q68G74 356 aa14.07□□□□□ -0.16
LINC00642-201ENST00000419459 C1orf186Q6ZWK4 172 aa14.07□□□□□ -0.16
LINC00642-201ENST00000419459 PLPPR4Q7Z2D5 763 aa14.07□□□□□ -0.16
LINC00642-201ENST00000419459 APTXQ7Z2E3 356 aaKnown RBP14.07□□□□□ -0.16
LINC00642-201ENST00000419459 PACS2Q86VP3 889 aa14.07□□□□□ -0.16
LINC00642-201ENST00000419459 IRX2Q9BZI1 471 aaPredicted RBP14.07□□□□□ -0.16
LINC00642-201ENST00000419459 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.07□□□□□ -0.16
LINC00642-201ENST00000419459 FAM204AQ9H8W3 233 aa14.07□□□□□ -0.16
LINC00642-201ENST00000419459 MAGEF1Q9HAY2 307 aa14.07□□□□□ -0.16
LINC00642-201ENST00000419459 TBC1D7Q9P0N9 293 aa14.07□□□□□ -0.16
LINC00642-201ENST00000419459 TARSL2A2RTX5 802 aaKnown RBP14.07□□□□□ -0.16
LINC00642-201ENST00000419459 SLC26A4O43511 780 aa14.07□□□□□ -0.16
LINC00642-201ENST00000419459 KLRC4O43908 158 aa14.07□□□□□ -0.16
LINC00642-201ENST00000419459 N4BP1O75113 896 aaKnown RBP14.07□□□□□ -0.16
LINC00642-201ENST00000419459 F2P00734 622 aa14.07□□□□□ -0.16
LINC00642-201ENST00000419459 RPN1P04843 607 aaKnown RBP14.07□□□□□ -0.16
LINC00642-201ENST00000419459 AMPD3Q01432 767 aa14.07□□□□□ -0.16
LINC00642-201ENST00000419459 RBL2Q08999 1139 aa14.07□□□□□ -0.16
LINC00642-201ENST00000419459 SWT1Q5T5J6 900 aaKnown RBP14.07□□□□□ -0.16
LINC00642-201ENST00000419459 OTUD6AQ7L8S5 288 aa14.07□□□□□ -0.16
LINC00642-201ENST00000419459 GLIS3Q8NEA6 775 aa14.07□□□□□ -0.16
LINC00642-201ENST00000419459 ATP8B4Q8TF62 1192 aa14.07□□□□□ -0.16
LINC00642-201ENST00000419459 DEFB118Q96PH6 123 aa14.07□□□□□ -0.16
LINC00642-201ENST00000419459 C7orf25Q9BPX7 421 aa14.07□□□□□ -0.16
LINC00642-201ENST00000419459 RNF208Q9H0X6 261 aa14.07□□□□□ -0.16
LINC00642-201ENST00000419459 DBR1Q9UK59 544 aaKnown RBP14.07□□□□□ -0.16
LINC00642-201ENST00000419459 MAPK8IP1Q9UQF2 711 aa14.07□□□□□ -0.16
LINC00642-201ENST00000419459 Q9Y3F1 56 aa14.07□□□□□ -0.16
LINC00642-201ENST00000419459 SCN10AQ9Y5Y9 1956 aa14.06□□□□□ -0.16
LINC00642-201ENST00000419459 ASGR1P07306 291 aa14.06□□□□□ -0.16
LINC00642-201ENST00000419459 INSRRP14616 1297 aa14.06□□□□□ -0.16
LINC00642-201ENST00000419459 DRP2Q13474 957 aa14.06□□□□□ -0.16
LINC00642-201ENST00000419459 GIT2Q14161 759 aa14.06□□□□□ -0.16
LINC00642-201ENST00000419459 KCNA10Q16322 511 aa14.06□□□□□ -0.16
LINC00642-201ENST00000419459 CDKAL1Q5VV42 579 aa14.06□□□□□ -0.16
LINC00642-201ENST00000419459 SLC35F6Q8N357 371 aa14.06□□□□□ -0.16
LINC00642-201ENST00000419459 NCAPGQ9BPX3 1015 aa14.06□□□□□ -0.16
LINC00642-201ENST00000419459 FGFBP2Q9BYJ0 223 aa14.06□□□□□ -0.16
LINC00642-201ENST00000419459 SPC25Q9HBM1 224 aa14.06□□□□□ -0.16
LINC00642-201ENST00000419459 ANKEF1Q9NU02 776 aa14.06□□□□□ -0.16
LINC00642-201ENST00000419459 DKC1O60832 514 aaKnown RBP eCLIP14.05□□□□□ -0.16
LINC00642-201ENST00000419459 SHOX2O60902 331 aaPredicted RBP14.05□□□□□ -0.16
LINC00642-201ENST00000419459 POLGP54098 1239 aaPredicted RBP14.05□□□□□ -0.16
LINC00642-201ENST00000419459 AMPD2Q01433 879 aa14.05□□□□□ -0.16
LINC00642-201ENST00000419459 BRDTQ58F21 947 aaPredicted RBP14.05□□□□□ -0.16
LINC00642-201ENST00000419459 TADA2BQ86TJ2 420 aa14.05□□□□□ -0.16
LINC00642-201ENST00000419459 DAW1Q8N136 415 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms