RNA–Protein interactions for RNA: ENST00000419181.5

GTF3A-202, Transcript of general transcription factor IIIA, humanhuman

TSL 1 (best)

Gene GTF3A, Length 1,191 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-202ENST00000419181 SYMPKQ92797 1274 aaKnown RBP22.56■■□□□ 1.2
GTF3A-202ENST00000419181 CASD1Q96PB1 797 aa22.56■■□□□ 1.2
GTF3A-202ENST00000419181 MMTAG2Q9BU76 263 aaKnown RBP22.56■■□□□ 1.2
GTF3A-202ENST00000419181 NFKBIZQ9BYH8 718 aa22.56■■□□□ 1.2
GTF3A-202ENST00000419181 DDX19AQ9NUU7 478 aaKnown RBP22.56■■□□□ 1.2
GTF3A-202ENST00000419181 HCSTQ9UBK5 93 aa22.56■■□□□ 1.2
GTF3A-202ENST00000419181 GRM6O15303 877 aa22.55■■□□□ 1.2
GTF3A-202ENST00000419181 CYP11B2P19099 503 aa22.55■■□□□ 1.2
GTF3A-202ENST00000419181 SYT1P21579 422 aa22.55■■□□□ 1.2
GTF3A-202ENST00000419181 CDC25AP30304 524 aa22.55■■□□□ 1.2
GTF3A-202ENST00000419181 RAB27AP51159 221 aa22.55■■□□□ 1.2
GTF3A-202ENST00000419181 MRPS5P82675 430 aaKnown RBP22.55■■□□□ 1.2
GTF3A-202ENST00000419181 NAALADL2Q58DX5 795 aa22.55■■□□□ 1.2
GTF3A-202ENST00000419181 CLLU1OSQ5K130 101 aa22.55■■□□□ 1.2
GTF3A-202ENST00000419181 MAEAQ7L5Y9 396 aa22.55■■□□□ 1.2
GTF3A-202ENST00000419181 LMAN2LQ9H0V9 348 aa22.55■■□□□ 1.2
GTF3A-202ENST00000419181 BHMT2Q9H2M3 363 aa22.55■■□□□ 1.2
GTF3A-202ENST00000419181 FAM105AQ9NUU6 356 aa22.55■■□□□ 1.2
GTF3A-202ENST00000419181 TYW1Q9NV66 732 aaKnown RBP22.55■■□□□ 1.2
GTF3A-202ENST00000419181 PLAGL2Q9UPG8 496 aa22.55■■□□□ 1.2
GTF3A-202ENST00000419181 PLXNA4Q9HCM2 1894 aa22.54■■□□□ 1.2
GTF3A-202ENST00000419181 ZNF623O75123 536 aa22.54■■□□□ 1.2
GTF3A-202ENST00000419181 SKIP12755 728 aa22.54■■□□□ 1.2
GTF3A-202ENST00000419181 MBTD1Q05BQ5 628 aa22.54■■□□□ 1.2
GTF3A-202ENST00000419181 TIGD5Q53EQ6 642 aa22.54■■□□□ 1.2
GTF3A-202ENST00000419181 LRRC55Q6ZSA7 311 aa22.54■■□□□ 1.2
GTF3A-202ENST00000419181 ABI1Q8IZP0 508 aa22.54■■□□□ 1.2
GTF3A-202ENST00000419181 ASB2Q96Q27 587 aa22.54■■□□□ 1.2
GTF3A-202ENST00000419181 CWH43Q9H720 699 aa22.54■■□□□ 1.2
GTF3A-202ENST00000419181 VWA3AA6NCI4 1184 aa22.53■■□□□ 1.2
GTF3A-202ENST00000419181 INO80B-WBP1J3KQ70 363 aa22.53■■□□□ 1.2
GTF3A-202ENST00000419181 TSPAN1O60635 241 aa22.53■■□□□ 1.2
GTF3A-202ENST00000419181 ERLIN2O94905 339 aa22.53■■□□□ 1.2
GTF3A-202ENST00000419181 ITGB1P05556 798 aa22.53■■□□□ 1.2
GTF3A-202ENST00000419181 AMHR2Q16671 573 aa22.53■■□□□ 1.2
GTF3A-202ENST00000419181 LRRC43Q8N309 656 aa22.53■■□□□ 1.2
GTF3A-202ENST00000419181 KLHL23Q8NBE8 558 aa22.53■■□□□ 1.2
GTF3A-202ENST00000419181 HELQQ8TDG4 1101 aa22.53■■□□□ 1.2
GTF3A-202ENST00000419181 ALG13Q9NP73 1137 aaKnown RBP22.53■■□□□ 1.2
GTF3A-202ENST00000419181 BMP15O95972 392 aa22.52■■□□□ 1.2
GTF3A-202ENST00000419181 AXLP30530 894 aa22.52■■□□□ 1.2
GTF3A-202ENST00000419181 CAMK1Q14012 370 aa22.52■■□□□ 1.2
GTF3A-202ENST00000419181 HYIQ5T013 277 aa22.52■■□□□ 1.2
GTF3A-202ENST00000419181 UBXN11Q5T124 520 aa22.52■■□□□ 1.2
GTF3A-202ENST00000419181 SPOUT1Q5T280 376 aaKnown RBP22.52■■□□□ 1.2
GTF3A-202ENST00000419181 COLGALT1Q8NBJ5 622 aa22.52■■□□□ 1.2
GTF3A-202ENST00000419181 SPPL3Q8TCT6 385 aa22.52■■□□□ 1.2
GTF3A-202ENST00000419181 RSPH1Q8WYR4 309 aa22.52■■□□□ 1.2
GTF3A-202ENST00000419181 AAASQ9NRG9 546 aa22.52■■□□□ 1.2
GTF3A-202ENST00000419181 FOXD4L1Q9NU39 408 aa22.52■■□□□ 1.2
GTF3A-202ENST00000419181 COG5Q9UP83 839 aa22.52■■□□□ 1.2
GTF3A-202ENST00000419181 PCDHB2Q9Y5E7 798 aa22.52■■□□□ 1.2
GTF3A-202ENST00000419181 PCDHB12Q9Y5F1 795 aa22.52■■□□□ 1.2
GTF3A-202ENST00000419181 LRRIQ4A6NIV6 560 aa22.51■■□□□ 1.19
GTF3A-202ENST00000419181 E9PMD0 336 aa22.51■■□□□ 1.19
GTF3A-202ENST00000419181 EYA4O95677 639 aa22.51■■□□□ 1.19
GTF3A-202ENST00000419181 LAG3P18627 525 aa22.51■■□□□ 1.19
GTF3A-202ENST00000419181 RESTQ13127 1097 aa22.51■■□□□ 1.19
GTF3A-202ENST00000419181 CDCA2Q69YH5 1023 aaPredicted RBP22.51■■□□□ 1.19
GTF3A-202ENST00000419181 KCNK18Q7Z418 384 aa22.51■■□□□ 1.19
GTF3A-202ENST00000419181 BSNDQ8WZ55 320 aa22.51■■□□□ 1.19
GTF3A-202ENST00000419181 LPPQ93052 612 aa22.51■■□□□ 1.19
GTF3A-202ENST00000419181 NSUN3Q9H649 340 aaKnown RBP22.51■■□□□ 1.19
GTF3A-202ENST00000419181 DNM3Q9UQ16 869 aa22.51■■□□□ 1.19
GTF3A-202ENST00000419181 TTC28Q96AY4 2481 aa22.51■■□□□ 1.19
GTF3A-202ENST00000419181 MEIS3P2A8K0S8 358 aa22.5■■□□□ 1.19
GTF3A-202ENST00000419181 DNAJB1P25685 340 aa22.5■■□□□ 1.19
GTF3A-202ENST00000419181 TFF2Q03403 129 aa22.5■■□□□ 1.19
GTF3A-202ENST00000419181 SF3A1Q15459 793 aaKnown RBP22.5■■□□□ 1.19
GTF3A-202ENST00000419181 CSPP1Q1MSJ5 1256 aa22.5■■□□□ 1.19
GTF3A-202ENST00000419181 AAK1Q2M2I8 961 aa22.5■■□□□ 1.19
GTF3A-202ENST00000419181 NOTUMQ6P988 496 aa22.5■■□□□ 1.19
GTF3A-202ENST00000419181 MRPL10Q7Z7H8 261 aaKnown RBP22.5■■□□□ 1.19
GTF3A-202ENST00000419181 HLA-CQ95604 372 aa22.5■■□□□ 1.19
GTF3A-202ENST00000419181 CCDC51Q96ER9 411 aa22.5■■□□□ 1.19
GTF3A-202ENST00000419181 AK8Q96MA6 479 aa22.5■■□□□ 1.19
GTF3A-202ENST00000419181 MRPL9Q9BYD2 267 aaKnown RBP22.5■■□□□ 1.19
GTF3A-202ENST00000419181 MTMR6Q9Y217 621 aa22.5■■□□□ 1.19
GTF3A-202ENST00000419181 ARF4P18085 180 aaPredicted RBP22.49■■□□□ 1.19
GTF3A-202ENST00000419181 NAMPTP43490 491 aa22.49■■□□□ 1.19
GTF3A-202ENST00000419181 NCBP1Q09161 790 aaKnown RBP22.49■■□□□ 1.19
GTF3A-202ENST00000419181 LONRF3Q496Y0 759 aa22.49■■□□□ 1.19
GTF3A-202ENST00000419181 TCEAL5Q5H9L2 206 aa22.49■■□□□ 1.19
GTF3A-202ENST00000419181 GLB1LQ6UWU2 654 aa22.49■■□□□ 1.19
GTF3A-202ENST00000419181 KCTD17Q8N5Z5 321 aa22.49■■□□□ 1.19
GTF3A-202ENST00000419181 POF1BQ8WVV4 589 aa22.49■■□□□ 1.19
GTF3A-202ENST00000419181 PGBD4Q96DM1 585 aa22.49■■□□□ 1.19
GTF3A-202ENST00000419181 CPB2Q96IY4 423 aa22.49■■□□□ 1.19
GTF3A-202ENST00000419181 PNMA5Q96PV4 448 aa22.49■■□□□ 1.19
GTF3A-202ENST00000419181 B4GALT5O43286 388 aa22.48■■□□□ 1.19
GTF3A-202ENST00000419181 FGF18O76093 207 aa22.48■■□□□ 1.19
GTF3A-202ENST00000419181 PPP4R3CPQ6ZMV5 832 aa22.48■■□□□ 1.19
GTF3A-202ENST00000419181 AGMOQ6ZNB7 445 aa22.48■■□□□ 1.19
GTF3A-202ENST00000419181 HSCBQ8IWL3 235 aa22.48■■□□□ 1.19
GTF3A-202ENST00000419181 ZBTB8OSQ8IWT0 167 aa22.48■■□□□ 1.19
GTF3A-202ENST00000419181 KIFAP3Q92845 792 aa22.48■■□□□ 1.19
GTF3A-202ENST00000419181 EIF2AQ9BY44 585 aaKnown RBP22.48■■□□□ 1.19
GTF3A-202ENST00000419181 NT5C3AQ9H0P0 336 aa22.48■■□□□ 1.19
GTF3A-202ENST00000419181 CSRNP2Q9H175 543 aa22.48■■□□□ 1.19
GTF3A-202ENST00000419181 STX6O43752 255 aa22.47■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms