RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 RAD51AP2Q09MP3 1159 aa25.52■■□□□ 1.68
SMARCB1-205ENST00000417137 DMP1Q13316 513 aaPredicted RBP25.52■■□□□ 1.68
SMARCB1-205ENST00000417137 ARSHQ5FYA8 562 aa25.52■■□□□ 1.68
SMARCB1-205ENST00000417137 RESP18Q5W5W9 173 aa25.52■■□□□ 1.68
SMARCB1-205ENST00000417137 FAM117BQ6P1L5 589 aa25.52■■□□□ 1.68
SMARCB1-205ENST00000417137 IQUBQ8NA54 791 aa25.52■■□□□ 1.68
SMARCB1-205ENST00000417137 LINC01599Q8WXQ3 324 aa25.52■■□□□ 1.68
SMARCB1-205ENST00000417137 BSNDQ8WZ55 320 aa25.52■■□□□ 1.68
SMARCB1-205ENST00000417137 CHAMP1Q96JM3 812 aa25.52■■□□□ 1.68
SMARCB1-205ENST00000417137 CUEDC2Q9H467 287 aa25.52■■□□□ 1.68
SMARCB1-205ENST00000417137 PIN4Q9Y237 131 aaKnown RBP25.52■■□□□ 1.68
SMARCB1-205ENST00000417137 INSL6Q9Y581 213 aa25.52■■□□□ 1.68
SMARCB1-205ENST00000417137 PCDHB7Q9Y5E2 793 aa25.52■■□□□ 1.68
SMARCB1-205ENST00000417137 CCDC169A6NNP5 214 aa25.51■■□□□ 1.67
SMARCB1-205ENST00000417137 RBAK-RBAKDNI3L0D1 243 aa25.51■■□□□ 1.67
SMARCB1-205ENST00000417137 DNAJB2P25686 324 aa25.51■■□□□ 1.67
SMARCB1-205ENST00000417137 PEX3P56589 373 aa25.51■■□□□ 1.67
SMARCB1-205ENST00000417137 MBTD1Q05BQ5 628 aa25.51■■□□□ 1.67
SMARCB1-205ENST00000417137 CDCA2Q69YH5 1023 aaPredicted RBP25.51■■□□□ 1.67
SMARCB1-205ENST00000417137 NPAS4Q8IUM7 802 aa25.51■■□□□ 1.67
SMARCB1-205ENST00000417137 LRRC15Q8TF66 581 aa25.51■■□□□ 1.67
SMARCB1-205ENST00000417137 TIFAQ96CG3 184 aa25.51■■□□□ 1.67
SMARCB1-205ENST00000417137 LRRC27Q9C0I9 530 aa25.51■■□□□ 1.67
SMARCB1-205ENST00000417137 AGPAT5Q9NUQ2 364 aa25.51■■□□□ 1.67
SMARCB1-205ENST00000417137 LARSQ9P2J5 1176 aaKnown RBP25.51■■□□□ 1.67
SMARCB1-205ENST00000417137 LOXHD1Q8IVV2 1947 aa25.51■■□□□ 1.67
SMARCB1-205ENST00000417137 LAMA3Q16787 3333 aa25.5■■□□□ 1.67
SMARCB1-205ENST00000417137 C9IYK1 514 aa25.5■■□□□ 1.67
SMARCB1-205ENST00000417137 SKIP12755 728 aa25.5■■□□□ 1.67
SMARCB1-205ENST00000417137 PLS3P13797 630 aa25.5■■□□□ 1.67
SMARCB1-205ENST00000417137 CMA1P23946 247 aa25.5■■□□□ 1.67
SMARCB1-205ENST00000417137 PBX2P40425 430 aa25.5■■□□□ 1.67
SMARCB1-205ENST00000417137 SMTNP53814 917 aa25.5■■□□□ 1.67
SMARCB1-205ENST00000417137 FAM189BP81408 668 aa25.5■■□□□ 1.67
SMARCB1-205ENST00000417137 NAALADL2Q58DX5 795 aa25.5■■□□□ 1.67
SMARCB1-205ENST00000417137 TWF2Q6IBS0 349 aaKnown RBP25.5■■□□□ 1.67
SMARCB1-205ENST00000417137 PHLPP2Q6ZVD8 1323 aa25.5■■□□□ 1.67
SMARCB1-205ENST00000417137 TMCO2Q7Z6W1 182 aaPredicted RBP25.5■■□□□ 1.67
SMARCB1-205ENST00000417137 DAW1Q8N136 415 aa25.5■■□□□ 1.67
SMARCB1-205ENST00000417137 PRIMPOLQ96LW4 560 aa25.5■■□□□ 1.67
SMARCB1-205ENST00000417137 YME1L1Q96TA2 773 aa25.5■■□□□ 1.67
SMARCB1-205ENST00000417137 PRMT7Q9NVM4 692 aaPredicted RBP25.5■■□□□ 1.67
SMARCB1-205ENST00000417137 TMEM265A0A087WTH1 108 aa25.49■■□□□ 1.67
SMARCB1-205ENST00000417137 A0A087X0B3 334 aa25.49■■□□□ 1.67
SMARCB1-205ENST00000417137 SFI1A8K8P3 1242 aa25.49■■□□□ 1.67
SMARCB1-205ENST00000417137 NPTX2P47972 431 aa25.49■■□□□ 1.67
SMARCB1-205ENST00000417137 MAPK7Q13164 816 aa25.49■■□□□ 1.67
SMARCB1-205ENST00000417137 MAPK6Q16659 721 aa25.49■■□□□ 1.67
SMARCB1-205ENST00000417137 NTPCRQ9BSD7 190 aaKnown RBP25.49■■□□□ 1.67
SMARCB1-205ENST00000417137 TRAIPQ9BWF2 469 aa25.49■■□□□ 1.67
SMARCB1-205ENST00000417137 ELAC1Q9H777 363 aaKnown RBP25.49■■□□□ 1.67
SMARCB1-205ENST00000417137 SLC28A3Q9HAS3 691 aa25.49■■□□□ 1.67
SMARCB1-205ENST00000417137 KMT5AQ9NQR1 393 aa25.49■■□□□ 1.67
SMARCB1-205ENST00000417137 NPHP3-ACAD11A0A0J9YXS1 232 aa25.48■■□□□ 1.67
SMARCB1-205ENST00000417137 A0A0U1RQF3 1178 aa25.48■■□□□ 1.67
SMARCB1-205ENST00000417137 TBCAO75347 108 aaKnown RBP25.48■■□□□ 1.67
SMARCB1-205ENST00000417137 FAM13AO94988 1023 aa25.48■■□□□ 1.67
SMARCB1-205ENST00000417137 AMPD3Q01432 767 aa25.48■■□□□ 1.67
SMARCB1-205ENST00000417137 GIT2Q14161 759 aa25.48■■□□□ 1.67
SMARCB1-205ENST00000417137 FAM187BQ17R55 369 aa25.48■■□□□ 1.67
SMARCB1-205ENST00000417137 SPIRE2Q8WWL2 714 aa25.48■■□□□ 1.67
SMARCB1-205ENST00000417137 DHX58Q96C10 678 aa25.48■■□□□ 1.67
SMARCB1-205ENST00000417137 CCDC51Q96ER9 411 aa25.48■■□□□ 1.67
SMARCB1-205ENST00000417137 REEP2Q9BRK0 252 aa25.48■■□□□ 1.67
SMARCB1-205ENST00000417137 FZD8Q9H461 694 aa25.48■■□□□ 1.67
SMARCB1-205ENST00000417137 TSHZ2Q9NRE2 1034 aa25.48■■□□□ 1.67
SMARCB1-205ENST00000417137 TMEM161AQ9NX61 479 aa25.48■■□□□ 1.67
SMARCB1-205ENST00000417137 KCNH3Q9ULD8 1083 aa25.48■■□□□ 1.67
SMARCB1-205ENST00000417137 H0YCG3 227 aa25.47■■□□□ 1.67
SMARCB1-205ENST00000417137 K7ERI5 159 aa25.47■■□□□ 1.67
SMARCB1-205ENST00000417137 POLR2DO15514 142 aaKnown RBP25.47■■□□□ 1.67
SMARCB1-205ENST00000417137 TSPAN1O60635 241 aa25.47■■□□□ 1.67
SMARCB1-205ENST00000417137 IBSPP21815 317 aaPredicted RBP25.47■■□□□ 1.67
SMARCB1-205ENST00000417137 HOXA11P31270 313 aaPredicted RBP25.47■■□□□ 1.67
SMARCB1-205ENST00000417137 RAB27AP51159 221 aa25.47■■□□□ 1.67
SMARCB1-205ENST00000417137 HTRA4P83105 476 aaPredicted RBP25.47■■□□□ 1.67
SMARCB1-205ENST00000417137 ZNF697Q5TEC3 545 aa25.47■■□□□ 1.67
SMARCB1-205ENST00000417137 NOTUMQ6P988 496 aa25.47■■□□□ 1.67
SMARCB1-205ENST00000417137 PPP4R3CPQ6ZMV5 832 aa25.47■■□□□ 1.67
SMARCB1-205ENST00000417137 NKX2-4Q9H2Z4 354 aa25.47■■□□□ 1.67
SMARCB1-205ENST00000417137 MAGEF1Q9HAY2 307 aa25.47■■□□□ 1.67
SMARCB1-205ENST00000417137 PARVGQ9HBI0 331 aa25.47■■□□□ 1.67
SMARCB1-205ENST00000417137 YBX2Q9Y2T7 364 aaKnown RBP25.47■■□□□ 1.67
SMARCB1-205ENST00000417137 A0A1W2PQ27 194 aa25.46■■□□□ 1.67
SMARCB1-205ENST00000417137 A0A1W2PQ64 194 aa25.46■■□□□ 1.67
SMARCB1-205ENST00000417137 A0A1W2PQD8 194 aa25.46■■□□□ 1.67
SMARCB1-205ENST00000417137 GOLGA6L4A6NEF3 574 aa25.46■■□□□ 1.67
SMARCB1-205ENST00000417137 EOMESO95936 686 aa25.46■■□□□ 1.67
SMARCB1-205ENST00000417137 MYOGP15173 224 aa25.46■■□□□ 1.67
SMARCB1-205ENST00000417137 SCP2P22307 547 aa25.46■■□□□ 1.67
SMARCB1-205ENST00000417137 CACNB1Q02641 598 aaPredicted RBP25.46■■□□□ 1.67
SMARCB1-205ENST00000417137 E2F4Q16254 413 aa25.46■■□□□ 1.67
SMARCB1-205ENST00000417137 CSPP1Q1MSJ5 1256 aa25.46■■□□□ 1.67
SMARCB1-205ENST00000417137 ECHDC2Q86YB7 292 aa25.46■■□□□ 1.67
SMARCB1-205ENST00000417137 CRIPAKQ8N1N5 446 aa25.46■■□□□ 1.67
SMARCB1-205ENST00000417137 DEFB123Q8N688 67 aa25.46■■□□□ 1.67
SMARCB1-205ENST00000417137 MYCT1Q8N699 235 aa25.46■■□□□ 1.67
SMARCB1-205ENST00000417137 DDX12PQ92771 950 aa25.46■■□□□ 1.67
SMARCB1-205ENST00000417137 IPO9Q96P70 1041 aaKnown RBP25.46■■□□□ 1.67
SMARCB1-205ENST00000417137 TNMDQ9H2S6 317 aa25.46■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms