RNA–Protein interactions for RNA: ENST00000416778.5

CPNE1-210, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-210ENST00000416778 LRRC43Q8N309 656 aa19.94■□□□□ 0.78
CPNE1-210ENST00000416778 MSLNLQ96KJ4 702 aa19.94■□□□□ 0.78
CPNE1-210ENST00000416778 ZNF558Q96NG5 402 aa19.94■□□□□ 0.78
CPNE1-210ENST00000416778 BMP2KQ9NSY1 1161 aaPredicted RBP19.94■□□□□ 0.78
CPNE1-210ENST00000416778 FAM105AQ9NUU6 356 aa19.94■□□□□ 0.78
CPNE1-210ENST00000416778 SPG21Q9NZD8 308 aa19.94■□□□□ 0.78
CPNE1-210ENST00000416778 PUF60Q9UHX1 559 aaKnown RBP19.94■□□□□ 0.78
CPNE1-210ENST00000416778 PIN4Q9Y237 131 aaKnown RBP19.94■□□□□ 0.78
CPNE1-210ENST00000416778 PER2O15055 1255 aa19.93■□□□□ 0.78
CPNE1-210ENST00000416778 MBTPS2O43462 519 aa19.93■□□□□ 0.78
CPNE1-210ENST00000416778 OFD1O75665 1012 aa19.93■□□□□ 0.78
CPNE1-210ENST00000416778 ARL2P36404 184 aa19.93■□□□□ 0.78
CPNE1-210ENST00000416778 PBX3P40426 434 aa19.93■□□□□ 0.78
CPNE1-210ENST00000416778 HMGN5P82970 282 aaKnown RBP19.93■□□□□ 0.78
CPNE1-210ENST00000416778 POU5F1BQ06416 359 aa19.93■□□□□ 0.78
CPNE1-210ENST00000416778 ZNF174Q15697 407 aa19.93■□□□□ 0.78
CPNE1-210ENST00000416778 SMAD2Q15796 467 aaKnown RBP19.93■□□□□ 0.78
CPNE1-210ENST00000416778 RNF149Q8NC42 400 aa19.93■□□□□ 0.78
CPNE1-210ENST00000416778 LPPQ93052 612 aa19.93■□□□□ 0.78
CPNE1-210ENST00000416778 MTRQ99707 1265 aa19.93■□□□□ 0.78
CPNE1-210ENST00000416778 AGPAT5Q9NUQ2 364 aa19.93■□□□□ 0.78
CPNE1-210ENST00000416778 FAM50BQ9Y247 325 aa19.93■□□□□ 0.78
CPNE1-210ENST00000416778 PCDHB2Q9Y5E7 798 aa19.93■□□□□ 0.78
CPNE1-210ENST00000416778 C19orf67A6NJJ6 358 aa19.92■□□□□ 0.78
CPNE1-210ENST00000416778 MEIS3P2A8K0S8 358 aa19.92■□□□□ 0.78
CPNE1-210ENST00000416778 PI4K2BG5E9Z4 385 aa19.92■□□□□ 0.78
CPNE1-210ENST00000416778 EYA4O95677 639 aa19.92■□□□□ 0.78
CPNE1-210ENST00000416778 PTENP60484 403 aa19.92■□□□□ 0.78
CPNE1-210ENST00000416778 KRT17Q04695 432 aa19.92■□□□□ 0.78
CPNE1-210ENST00000416778 MXD4Q14582 209 aaPredicted RBP19.92■□□□□ 0.78
CPNE1-210ENST00000416778 CLUL1Q15846 466 aa19.92■□□□□ 0.78
CPNE1-210ENST00000416778 LONRF3Q496Y0 759 aa19.92■□□□□ 0.78
CPNE1-210ENST00000416778 UBXN11Q5T124 520 aa19.92■□□□□ 0.78
CPNE1-210ENST00000416778 CATSPER3Q86XQ3 398 aa19.92■□□□□ 0.78
CPNE1-210ENST00000416778 SLC39A11Q8N1S5 342 aa19.92■□□□□ 0.78
CPNE1-210ENST00000416778 C4orf32Q8N8J7 132 aa19.92■□□□□ 0.78
CPNE1-210ENST00000416778 PIGOQ8TEQ8 1089 aa19.92■□□□□ 0.78
CPNE1-210ENST00000416778 C1QTNF1Q9BXJ1 281 aa19.92■□□□□ 0.78
CPNE1-210ENST00000416778 PRKAG3Q9UGI9 489 aa19.92■□□□□ 0.78
CPNE1-210ENST00000416778 CD207Q9UJ71 328 aa19.92■□□□□ 0.78
CPNE1-210ENST00000416778 POTEMA6NI47 508 aa19.91■□□□□ 0.78
CPNE1-210ENST00000416778 DGAT1O75907 488 aa19.91■□□□□ 0.78
CPNE1-210ENST00000416778 GLP2RO95838 553 aa19.91■□□□□ 0.78
CPNE1-210ENST00000416778 TECP42680 631 aa19.91■□□□□ 0.78
CPNE1-210ENST00000416778 RARRES1P49788 294 aa19.91■□□□□ 0.78
CPNE1-210ENST00000416778 BCAR1P56945 870 aa19.91■□□□□ 0.78
CPNE1-210ENST00000416778 COASYQ13057 564 aa19.91■□□□□ 0.78
CPNE1-210ENST00000416778 DUSP6Q16828 381 aa19.91■□□□□ 0.78
CPNE1-210ENST00000416778 RSPH1Q8WYR4 309 aa19.91■□□□□ 0.78
CPNE1-210ENST00000416778 MRPL9Q9BYD2 267 aaKnown RBP19.91■□□□□ 0.78
CPNE1-210ENST00000416778 NGRNQ9NPE2 291 aaKnown RBP19.91■□□□□ 0.78
CPNE1-210ENST00000416778 KIAA1671Q9BY89 1806 aa19.9■□□□□ 0.78
CPNE1-210ENST00000416778 MED24O75448 989 aa19.9■□□□□ 0.78
CPNE1-210ENST00000416778 PPM1AP35813 382 aa19.9■□□□□ 0.78
CPNE1-210ENST00000416778 ALDH7A1P49419 539 aaKnown RBP19.9■□□□□ 0.78
CPNE1-210ENST00000416778 NDUFV1P49821 464 aa19.9■□□□□ 0.78
CPNE1-210ENST00000416778 RAB27AP51159 221 aa19.9■□□□□ 0.78
CPNE1-210ENST00000416778 ZP2Q05996 745 aa19.9■□□□□ 0.78
CPNE1-210ENST00000416778 ORC2Q13416 577 aaPredicted RBP19.9■□□□□ 0.78
CPNE1-210ENST00000416778 SMAD4Q13485 552 aaKnown RBP19.9■□□□□ 0.78
CPNE1-210ENST00000416778 KCNC3Q14003 757 aa19.9■□□□□ 0.78
CPNE1-210ENST00000416778 NOMO2Q5JPE7 1267 aa19.9■□□□□ 0.78
CPNE1-210ENST00000416778 AGMOQ6ZNB7 445 aa19.9■□□□□ 0.78
CPNE1-210ENST00000416778 IFNLR1Q8IU57 520 aaPredicted RBP19.9■□□□□ 0.78
CPNE1-210ENST00000416778 NOSTRINQ8IVI9 506 aa19.9■□□□□ 0.78
CPNE1-210ENST00000416778 ADHFE1Q8IWW8 467 aa19.9■□□□□ 0.78
CPNE1-210ENST00000416778 FAM184AQ8NB25 1140 aa19.9■□□□□ 0.78
CPNE1-210ENST00000416778 VN1R2Q8NFZ6 395 aa19.9■□□□□ 0.78
CPNE1-210ENST00000416778 ASAP3Q8TDY4 903 aa19.9■□□□□ 0.78
CPNE1-210ENST00000416778 PGBD4Q96DM1 585 aa19.9■□□□□ 0.78
CPNE1-210ENST00000416778 CDCA3Q99618 268 aaPredicted RBP19.9■□□□□ 0.78
CPNE1-210ENST00000416778 POLR3CQ9BUI4 534 aaPredicted RBP19.9■□□□□ 0.78
CPNE1-210ENST00000416778 NRDE2Q9H7Z3 1164 aa19.9■□□□□ 0.78
CPNE1-210ENST00000416778 TUFT1Q9NNX1 390 aa19.9■□□□□ 0.78
CPNE1-210ENST00000416778 ATG2AQ2TAZ0 1938 aa19.9■□□□□ 0.78
CPNE1-210ENST00000416778 HIDE1A8MVS5 230 aa19.89■□□□□ 0.77
CPNE1-210ENST00000416778 NT5C1B-RDH14C9J2C7 533 aa19.89■□□□□ 0.77
CPNE1-210ENST00000416778 GLRA2P23416 452 aa19.89■□□□□ 0.77
CPNE1-210ENST00000416778 U2AF2P26368 475 aaKnown RBP eCLIP19.89■□□□□ 0.773e-26■□□□□ 9.9
CPNE1-210ENST00000416778 SSTR3P32745 418 aaPredicted RBP19.89■□□□□ 0.77
CPNE1-210ENST00000416778 RBM10P98175 930 aaKnown RBP19.89■□□□□ 0.77
CPNE1-210ENST00000416778 PCBP1Q15365 356 aaKnown RBP eCLIP19.89■□□□□ 0.772e-19■□□□□ 8.2
CPNE1-210ENST00000416778 GLB1LQ6UWU2 654 aa19.89■□□□□ 0.77
CPNE1-210ENST00000416778 TMEM184AQ6ZMB5 413 aa19.89■□□□□ 0.77
CPNE1-210ENST00000416778 MRPL43Q8N983 215 aaKnown RBP19.89■□□□□ 0.77
CPNE1-210ENST00000416778 NACC1Q96RE7 527 aa19.89■□□□□ 0.77
CPNE1-210ENST00000416778 TCF25Q9BQ70 676 aa19.89■□□□□ 0.77
CPNE1-210ENST00000416778 C5orf42Q9H799 3197 aa19.89■□□□□ 0.77
CPNE1-210ENST00000416778 TBC1D13Q9NVG8 400 aa19.89■□□□□ 0.77
CPNE1-210ENST00000416778 GALTP07902 379 aa19.88■□□□□ 0.77
CPNE1-210ENST00000416778 COL9A1P20849 921 aa19.88■□□□□ 0.77
CPNE1-210ENST00000416778 TRAPPC10P48553 1259 aa19.88■□□□□ 0.77
CPNE1-210ENST00000416778 TOB1P50616 345 aaPredicted RBP19.88■□□□□ 0.77
CPNE1-210ENST00000416778 AFF1P51825 1210 aaKnown RBP19.88■□□□□ 0.77
CPNE1-210ENST00000416778 RABEP1Q15276 862 aa19.88■□□□□ 0.77
CPNE1-210ENST00000416778 TTC38Q5R3I4 469 aa19.88■□□□□ 0.77
CPNE1-210ENST00000416778 PLPP4Q5VZY2 271 aa19.88■□□□□ 0.77
CPNE1-210ENST00000416778 TMC7Q7Z402 723 aa19.88■□□□□ 0.77
CPNE1-210ENST00000416778 ZNF280BQ86YH2 543 aa19.88■□□□□ 0.77
CPNE1-210ENST00000416778 SMG8Q8ND04 991 aaKnown RBP19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms