RNA–Protein interactions for RNA: ENST00000416188.2

PHRF1-203, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PHRF1, Length 5,227 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-203ENST00000416188 RTFDC1Q9BY42 306 aaPredicted RBP16.73■□□□□ 0.27
PHRF1-203ENST00000416188 MAGED2Q9UNF1 606 aaPredicted RBP16.73■□□□□ 0.27
PHRF1-203ENST00000416188 PGK2P07205 417 aa16.73■□□□□ 0.27
PHRF1-203ENST00000416188 GPC3P51654 580 aa16.73■□□□□ 0.27
PHRF1-203ENST00000416188 RPS6P62753 249 aaKnown RBP16.73■□□□□ 0.27
PHRF1-203ENST00000416188 MAP7Q14244 749 aa16.73■□□□□ 0.27
PHRF1-203ENST00000416188 PGBD4Q96DM1 585 aa16.73■□□□□ 0.27
PHRF1-203ENST00000416188 MAGEB2O15479 319 aa16.73■□□□□ 0.27
PHRF1-203ENST00000416188 GPC4O75487 556 aa16.73■□□□□ 0.27
PHRF1-203ENST00000416188 SUN1O94901 812 aa16.73■□□□□ 0.27
PHRF1-203ENST00000416188 MAP3K21Q5TCX8 1036 aa16.73■□□□□ 0.27
PHRF1-203ENST00000416188 SPATS2Q86XZ4 545 aaKnown RBP16.73■□□□□ 0.27
PHRF1-203ENST00000416188 KCNQ5Q9NR82 932 aa16.73■□□□□ 0.27
PHRF1-203ENST00000416188 RNF14Q9UBS8 474 aa16.73■□□□□ 0.27
PHRF1-203ENST00000416188 MCF2LO15068 1137 aa16.72■□□□□ 0.27
PHRF1-203ENST00000416188 MFAP3LO75121 409 aa16.72■□□□□ 0.27
PHRF1-203ENST00000416188 IFT88Q13099 833 aa16.72■□□□□ 0.27
PHRF1-203ENST00000416188 SKA2Q8WVK7 121 aaPredicted RBP16.72■□□□□ 0.27
PHRF1-203ENST00000416188 AP1M1Q9BXS5 423 aa16.72■□□□□ 0.27
PHRF1-203ENST00000416188 SLC7A5Q01650 507 aa16.72■□□□□ 0.27
PHRF1-203ENST00000416188 RAPH1Q70E73 1250 aa16.72■□□□□ 0.27
PHRF1-203ENST00000416188 DNAAF3Q8N9W5 541 aa16.72■□□□□ 0.27
PHRF1-203ENST00000416188 PBKQ96KB5 322 aa16.72■□□□□ 0.27
PHRF1-203ENST00000416188 IFT122Q9HBG6 1241 aa16.72■□□□□ 0.27
PHRF1-203ENST00000416188 CCDC151A5D8V7 595 aa16.72■□□□□ 0.27
PHRF1-203ENST00000416188 PFDN6O15212 129 aa16.72■□□□□ 0.27
PHRF1-203ENST00000416188 YWHABP31946 246 aaKnown RBP16.72■□□□□ 0.27
PHRF1-203ENST00000416188 SATB1Q01826 763 aa16.72■□□□□ 0.27
PHRF1-203ENST00000416188 PRPSAP1Q14558 356 aa16.72■□□□□ 0.27
PHRF1-203ENST00000416188 MUM1L1Q5H9M0 696 aa16.72■□□□□ 0.27
PHRF1-203ENST00000416188 TRIM68Q6AZZ1 485 aa16.72■□□□□ 0.27
PHRF1-203ENST00000416188 HDAC11Q96DB2 347 aa16.72■□□□□ 0.27
PHRF1-203ENST00000416188 ATP11BQ9Y2G3 1177 aa16.72■□□□□ 0.27
PHRF1-203ENST00000416188 TRIM49BA6NDI0 452 aa16.72■□□□□ 0.27
PHRF1-203ENST00000416188 BNIP3LO60238 219 aa16.72■□□□□ 0.27
PHRF1-203ENST00000416188 VCAM1P19320 739 aa16.72■□□□□ 0.27
PHRF1-203ENST00000416188 ERAP1Q9NZ08 941 aa16.72■□□□□ 0.27
PHRF1-203ENST00000416188 TBK1Q9UHD2 729 aa16.72■□□□□ 0.27
PHRF1-203ENST00000416188 ATP8B1O43520 1251 aa16.71■□□□□ 0.27
PHRF1-203ENST00000416188 CIITAP33076 1130 aa16.71■□□□□ 0.27
PHRF1-203ENST00000416188 XXYLT1Q8NBI6 393 aa16.71■□□□□ 0.27
PHRF1-203ENST00000416188 PCSK9Q8NBP7 692 aaKnown RBP16.71■□□□□ 0.27
PHRF1-203ENST00000416188 RAD54LQ92698 747 aa16.71■□□□□ 0.27
PHRF1-203ENST00000416188 MAP3K20Q9NYL2 800 aaKnown RBP16.71■□□□□ 0.27
PHRF1-203ENST00000416188 ARL4AP40617 200 aa16.71■□□□□ 0.27
PHRF1-203ENST00000416188 EFNA5P52803 228 aa16.71■□□□□ 0.27
PHRF1-203ENST00000416188 MRPS25P82663 173 aaKnown RBP16.71■□□□□ 0.27
PHRF1-203ENST00000416188 ASPHQ12797 758 aa16.71■□□□□ 0.27
PHRF1-203ENST00000416188 TMED2Q15363 201 aa16.71■□□□□ 0.27
PHRF1-203ENST00000416188 JMJD4Q9H9V9 463 aa16.71■□□□□ 0.27
PHRF1-203ENST00000416188 EIF3CLB5ME19 914 aaKnown RBP16.71■□□□□ 0.26
PHRF1-203ENST00000416188 TRAPPC3O43617 180 aa16.71■□□□□ 0.26
PHRF1-203ENST00000416188 CPP00450 1065 aa16.71■□□□□ 0.26
PHRF1-203ENST00000416188 ICAM1P05362 532 aa16.71■□□□□ 0.26
PHRF1-203ENST00000416188 TM4SF1P30408 202 aa16.71■□□□□ 0.26
PHRF1-203ENST00000416188 VEPH1Q14D04 833 aa16.71■□□□□ 0.26
PHRF1-203ENST00000416188 UNC13DQ70J99 1090 aa16.71■□□□□ 0.26
PHRF1-203ENST00000416188 CCDC197Q8NCU1 140 aa16.71■□□□□ 0.26
PHRF1-203ENST00000416188 TAAR1Q96RJ0 339 aa16.71■□□□□ 0.26
PHRF1-203ENST00000416188 EIF3CQ99613 913 aaKnown RBP16.71■□□□□ 0.26
PHRF1-203ENST00000416188 HERVK_113P62684 666 aa16.7■□□□□ 0.26
PHRF1-203ENST00000416188 ZNF699Q32M78 642 aa16.7■□□□□ 0.26
PHRF1-203ENST00000416188 C10orf76Q5T2E6 689 aa16.7■□□□□ 0.26
PHRF1-203ENST00000416188 DARS2Q6PI48 645 aaKnown RBP16.7■□□□□ 0.26
PHRF1-203ENST00000416188 PPP4R3CPQ6ZMV5 832 aa16.7■□□□□ 0.26
PHRF1-203ENST00000416188 FAM205AQ6ZU69 1335 aa16.7■□□□□ 0.26
PHRF1-203ENST00000416188 HSPA6P17066 643 aa16.7■□□□□ 0.26
PHRF1-203ENST00000416188 KCTD6Q8NC69 237 aa16.7■□□□□ 0.26
PHRF1-203ENST00000416188 CAMTA1Q9Y6Y1 1673 aa16.7■□□□□ 0.26
PHRF1-203ENST00000416188 FGFR2P21802 821 aa16.7■□□□□ 0.26
PHRF1-203ENST00000416188 STOX1Q6ZVD7 989 aa16.7■□□□□ 0.26
PHRF1-203ENST00000416188 CEP120Q8N960 986 aa16.7■□□□□ 0.26
PHRF1-203ENST00000416188 KIF12Q96FN5 646 aa16.7■□□□□ 0.26
PHRF1-203ENST00000416188 STARD7Q9NQZ5 370 aa16.7■□□□□ 0.26
PHRF1-203ENST00000416188 LMCD1Q9NZU5 365 aa16.7■□□□□ 0.26
PHRF1-203ENST00000416188 IPO11Q9UI26 975 aaKnown RBP16.7■□□□□ 0.26
PHRF1-203ENST00000416188 SART1O43290 800 aaKnown RBP16.7■□□□□ 0.26
PHRF1-203ENST00000416188 MSH2P43246 934 aa16.7■□□□□ 0.26
PHRF1-203ENST00000416188 NOGQ13253 232 aa16.7■□□□□ 0.26
PHRF1-203ENST00000416188 TSTA3Q13630 321 aaPredicted RBP16.7■□□□□ 0.26
PHRF1-203ENST00000416188 RCN2Q14257 317 aa16.7■□□□□ 0.26
PHRF1-203ENST00000416188 JADE1Q6IE81 842 aa16.7■□□□□ 0.26
PHRF1-203ENST00000416188 PRKCBP05771 671 aa16.69■□□□□ 0.26
PHRF1-203ENST00000416188 INHBEP58166 350 aa16.69■□□□□ 0.26
PHRF1-203ENST00000416188 DBN1Q16643 649 aa16.69■□□□□ 0.26
PHRF1-203ENST00000416188 ZNF394Q53GI3 561 aa16.69■□□□□ 0.26
PHRF1-203ENST00000416188 SH2D3AQ9BRG2 576 aa16.69■□□□□ 0.26
PHRF1-203ENST00000416188 GOLPH3LQ9H4A5 285 aa16.69■□□□□ 0.26
PHRF1-203ENST00000416188 RGL1Q9NZL6 768 aa16.69■□□□□ 0.26
PHRF1-203ENST00000416188 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.69■□□□□ 0.26
PHRF1-203ENST00000416188 MAFGO15525 162 aa16.69■□□□□ 0.26
PHRF1-203ENST00000416188 HOXA7P31268 230 aaPredicted RBP16.69■□□□□ 0.26
PHRF1-203ENST00000416188 CLCN6P51797 869 aa16.69■□□□□ 0.26
PHRF1-203ENST00000416188 MMEL1Q495T6 779 aa16.69■□□□□ 0.26
PHRF1-203ENST00000416188 RGMBQ6NW40 437 aa16.69■□□□□ 0.26
PHRF1-203ENST00000416188 XRRA1Q6P2D8 792 aa16.69■□□□□ 0.26
PHRF1-203ENST00000416188 EHD4Q9H223 541 aa16.69■□□□□ 0.26
PHRF1-203ENST00000416188 TMEM143Q96AN5 459 aa16.69■□□□□ 0.26
PHRF1-203ENST00000416188 RNF208Q9H0X6 261 aa16.69■□□□□ 0.26
PHRF1-203ENST00000416188 C17orf102A2RUQ5 167 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms