RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 KITP10721 976 aa13.79□□□□□ -0.2
SCN1B-202ENST00000415950 BIRC2Q13490 618 aa13.79□□□□□ -0.2
SCN1B-202ENST00000415950 RINT1Q6NUQ1 792 aa13.79□□□□□ -0.2
SCN1B-202ENST00000415950 TTI2Q6NXR4 508 aa13.79□□□□□ -0.2
SCN1B-202ENST00000415950 CFAP36Q96G28 342 aa13.79□□□□□ -0.2
SCN1B-202ENST00000415950 CEP170P1Q96L14 293 aa13.79□□□□□ -0.2
SCN1B-202ENST00000415950 SMYD3Q9H7B4 428 aa13.79□□□□□ -0.2
SCN1B-202ENST00000415950 KLHL11Q9NVR0 708 aa13.79□□□□□ -0.2
SCN1B-202ENST00000415950 CNTNAP5Q8WYK1 1306 aa13.79□□□□□ -0.2
SCN1B-202ENST00000415950 MCF2LO15068 1137 aa13.79□□□□□ -0.2
SCN1B-202ENST00000415950 KCNQ2O43526 872 aa13.79□□□□□ -0.2
SCN1B-202ENST00000415950 TTC4O95801 387 aa13.79□□□□□ -0.2
SCN1B-202ENST00000415950 CSF1RP07333 972 aa13.79□□□□□ -0.2
SCN1B-202ENST00000415950 KLRK1P26718 216 aa13.79□□□□□ -0.2
SCN1B-202ENST00000415950 RNASELQ05823 741 aaKnown RBP13.79□□□□□ -0.2
SCN1B-202ENST00000415950 CAPRIN2Q6IMN6 1127 aaKnown RBP13.79□□□□□ -0.2
SCN1B-202ENST00000415950 SLC30A10Q6XR72 485 aa13.79□□□□□ -0.2
SCN1B-202ENST00000415950 SCARA5Q6ZMJ2 495 aa13.79□□□□□ -0.2
SCN1B-202ENST00000415950 MMGT1Q8N4V1 131 aa13.79□□□□□ -0.2
SCN1B-202ENST00000415950 CCDC138Q96M89 665 aa13.79□□□□□ -0.2
SCN1B-202ENST00000415950 CDC42BPGQ6DT37 1551 aa13.79□□□□□ -0.2
SCN1B-202ENST00000415950 KIDINS220Q9ULH0 1771 aa13.79□□□□□ -0.2
SCN1B-202ENST00000415950 CFAP69A5D8W1 941 aa13.78□□□□□ -0.2
SCN1B-202ENST00000415950 ESRRGP62508 458 aa13.78□□□□□ -0.2
SCN1B-202ENST00000415950 TRIM28Q13263 835 aaKnown RBP13.78□□□□□ -0.2
SCN1B-202ENST00000415950 KYNUQ16719 465 aa13.78□□□□□ -0.2
SCN1B-202ENST00000415950 EPC2Q52LR7 807 aa13.78□□□□□ -0.2
SCN1B-202ENST00000415950 PDIK1LQ8N165 341 aa13.78□□□□□ -0.2
SCN1B-202ENST00000415950 SLC35G2Q8TBE7 412 aa13.78□□□□□ -0.2
SCN1B-202ENST00000415950 XPO6Q96QU8 1125 aaKnown RBP13.78□□□□□ -0.2
SCN1B-202ENST00000415950 TTC1Q99614 292 aa13.78□□□□□ -0.2
SCN1B-202ENST00000415950 ADPGKQ9BRR6 497 aa13.78□□□□□ -0.2
SCN1B-202ENST00000415950 KMT5AQ9NQR1 393 aa13.78□□□□□ -0.2
SCN1B-202ENST00000415950 SALL1Q9NSC2 1324 aa13.78□□□□□ -0.2
SCN1B-202ENST00000415950 GYG2O15488 501 aa13.78□□□□□ -0.2
SCN1B-202ENST00000415950 ITGA4P13612 1032 aa13.78□□□□□ -0.2
SCN1B-202ENST00000415950 ZC2HC1CQ53FD0 456 aaPredicted RBP13.78□□□□□ -0.2
SCN1B-202ENST00000415950 USP38Q8NB14 1042 aa13.78□□□□□ -0.2
SCN1B-202ENST00000415950 PPRC1Q5VV67 1664 aaKnown RBP13.78□□□□□ -0.2
SCN1B-202ENST00000415950 PI4K2BG5E9Z4 385 aa13.78□□□□□ -0.2
SCN1B-202ENST00000415950 MAPK13O15264 365 aa13.78□□□□□ -0.2
SCN1B-202ENST00000415950 GCFC2P16383 781 aaKnown RBP13.78□□□□□ -0.2
SCN1B-202ENST00000415950 GARSP41250 739 aaKnown RBP13.78□□□□□ -0.2
SCN1B-202ENST00000415950 EPHB1P54762 984 aa13.78□□□□□ -0.2
SCN1B-202ENST00000415950 GRM4Q14833 912 aa13.78□□□□□ -0.2
SCN1B-202ENST00000415950 C2CD6Q53TS8 623 aa13.78□□□□□ -0.2
SCN1B-202ENST00000415950 PAPD7Q5XG87 772 aaKnown RBP13.78□□□□□ -0.2
SCN1B-202ENST00000415950 LMBRD2Q68DH5 695 aaPredicted RBP13.78□□□□□ -0.2
SCN1B-202ENST00000415950 SPOPLQ6IQ16 392 aa13.78□□□□□ -0.2
SCN1B-202ENST00000415950 CYB5D1Q6P9G0 228 aa13.78□□□□□ -0.2
SCN1B-202ENST00000415950 ADGRA1Q86SQ6 560 aa13.78□□□□□ -0.2
SCN1B-202ENST00000415950 SYT2Q8N9I0 419 aaPredicted RBP13.78□□□□□ -0.2
SCN1B-202ENST00000415950 FGD4Q96M96 766 aa13.78□□□□□ -0.2
SCN1B-202ENST00000415950 C11orf70Q9BRQ4 267 aa13.78□□□□□ -0.2
SCN1B-202ENST00000415950 KCNG1Q9UIX4 513 aa13.78□□□□□ -0.2
SCN1B-202ENST00000415950 hCG_2014768A0A024R1R8 64 aa13.78□□□□□ -0.2
SCN1B-202ENST00000415950 WNT7AO00755 349 aa13.78□□□□□ -0.2
SCN1B-202ENST00000415950 SETSIPP0DME0 302 aa13.78□□□□□ -0.2
SCN1B-202ENST00000415950 AKR1B1P15121 316 aa13.78□□□□□ -0.2
SCN1B-202ENST00000415950 SARSP49591 514 aaKnown RBP13.78□□□□□ -0.2
SCN1B-202ENST00000415950 MIGA2Q7L4E1 593 aa13.78□□□□□ -0.2
SCN1B-202ENST00000415950 EPM2AIP1Q7L775 607 aaPredicted RBP13.78□□□□□ -0.2
SCN1B-202ENST00000415950 C4orf33Q8N1A6 199 aa13.78□□□□□ -0.2
SCN1B-202ENST00000415950 LRRC37BQ96QE4 947 aa13.78□□□□□ -0.2
SCN1B-202ENST00000415950 KLF6Q99612 283 aaPredicted RBP13.78□□□□□ -0.2
SCN1B-202ENST00000415950 PNPLA7Q6ZV29 1317 aa13.77□□□□□ -0.2
SCN1B-202ENST00000415950 ATXN8OSP0DMR3 200 aa13.77□□□□□ -0.2
SCN1B-202ENST00000415950 TMPRSS15P98073 1019 aa13.77□□□□□ -0.2
SCN1B-202ENST00000415950 PKN1Q16512 942 aa13.77□□□□□ -0.2
SCN1B-202ENST00000415950 CDO1Q16878 200 aa13.77□□□□□ -0.2
SCN1B-202ENST00000415950 LRRC36Q1X8D7 754 aa13.77□□□□□ -0.2
SCN1B-202ENST00000415950 LRRC23Q53EV4 343 aaPredicted RBP13.77□□□□□ -0.2
SCN1B-202ENST00000415950 RNF207Q6ZRF8 634 aa13.77□□□□□ -0.2
SCN1B-202ENST00000415950 FAM196AQ6ZSG2 479 aa13.77□□□□□ -0.2
SCN1B-202ENST00000415950 RMDN2Q96LZ7 410 aa13.77□□□□□ -0.2
SCN1B-202ENST00000415950 PPP1R16BQ96T49 567 aa13.77□□□□□ -0.2
SCN1B-202ENST00000415950 KRT3P12035 628 aa13.77□□□□□ -0.21
SCN1B-202ENST00000415950 HSPA6P17066 643 aa13.77□□□□□ -0.21
SCN1B-202ENST00000415950 RSBN1LQ6PCB5 846 aaPredicted RBP13.77□□□□□ -0.21
SCN1B-202ENST00000415950 EEPD1Q7L9B9 569 aa13.77□□□□□ -0.21
SCN1B-202ENST00000415950 ATP6V1E2Q96A05 226 aa13.77□□□□□ -0.21
SCN1B-202ENST00000415950 NUDCD1Q96RS6 583 aa13.77□□□□□ -0.21
SCN1B-202ENST00000415950 DNAJC7Q99615 494 aa13.77□□□□□ -0.21
SCN1B-202ENST00000415950 SEMA6BQ9H3T3 888 aa13.77□□□□□ -0.21
SCN1B-202ENST00000415950 ZWILCHQ9H900 591 aa13.77□□□□□ -0.21
SCN1B-202ENST00000415950 L3MBTL1Q9Y468 752 aa13.77□□□□□ -0.21
SCN1B-202ENST00000415950 PDE4DIPQ5VU43 2346 aa13.77□□□□□ -0.21
SCN1B-202ENST00000415950 F5H423 210 aaPredicted RBP13.77□□□□□ -0.21
SCN1B-202ENST00000415950 GNGT2O14610 69 aa13.77□□□□□ -0.21
SCN1B-202ENST00000415950 KIAA1755Q5JYT7 1200 aa13.77□□□□□ -0.21
SCN1B-202ENST00000415950 LRRC34Q8IZ02 419 aa13.77□□□□□ -0.21
SCN1B-202ENST00000415950 ADGRF4Q8IZF3 695 aa13.77□□□□□ -0.21
SCN1B-202ENST00000415950 PROM2Q8N271 834 aa13.77□□□□□ -0.21
SCN1B-202ENST00000415950 SLC7A3Q8WY07 619 aa13.77□□□□□ -0.21
SCN1B-202ENST00000415950 RAPGEF5Q92565 580 aa13.77□□□□□ -0.21
SCN1B-202ENST00000415950 SH3GLB2Q9NR46 395 aa13.77□□□□□ -0.21
SCN1B-202ENST00000415950 PPP1R12AO14974 1030 aaPredicted RBP13.76□□□□□ -0.21
SCN1B-202ENST00000415950 CLDN3O15551 220 aa13.76□□□□□ -0.21
SCN1B-202ENST00000415950 SCP2P22307 547 aa13.76□□□□□ -0.21
SCN1B-202ENST00000415950 QRICH1Q2TAL8 776 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms