RNA–Protein interactions for RNA: ENST00000414558.2

ATG4C-204, Transcript of autophagy related 4C cysteine peptidase, humanhuman

TSL 5

Gene ATG4C, Length 464 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4C-204ENST00000414558 FAM111BQ6SJ93 734 aa7.53□□□□□ -1.2
ATG4C-204ENST00000414558 FRMD7Q6ZUT3 714 aa7.53□□□□□ -1.2
ATG4C-204ENST00000414558 C1orf210Q8IVY1 113 aa7.53□□□□□ -1.2
ATG4C-204ENST00000414558 SOX7Q9BT81 388 aa7.53□□□□□ -1.2
ATG4C-204ENST00000414558 ZNF341Q9BYN7 854 aa7.53□□□□□ -1.2
ATG4C-204ENST00000414558 WNT8AQ9H1J5 351 aa7.53□□□□□ -1.2
ATG4C-204ENST00000414558 EMC7Q9NPA0 242 aa7.53□□□□□ -1.2
ATG4C-204ENST00000414558 AKAP8O43823 692 aaKnown RBP7.52□□□□□ -1.21
ATG4C-204ENST00000414558 NRP2O60462 931 aa7.52□□□□□ -1.21
ATG4C-204ENST00000414558 PFKMP08237 780 aa7.52□□□□□ -1.21
ATG4C-204ENST00000414558 GPR15P49685 360 aa7.52□□□□□ -1.21
ATG4C-204ENST00000414558 DDB1Q16531 1140 aa7.52□□□□□ -1.21
ATG4C-204ENST00000414558 CCDC178Q5BJE1 867 aa7.52□□□□□ -1.21
ATG4C-204ENST00000414558 UNC5BQ8IZJ1 945 aa7.52□□□□□ -1.21
ATG4C-204ENST00000414558 Q8N1X5 172 aa7.52□□□□□ -1.21
ATG4C-204ENST00000414558 SLC16A11Q8NCK7 471 aa7.52□□□□□ -1.21
ATG4C-204ENST00000414558 PPP1R14CQ8TAE6 165 aa7.52□□□□□ -1.21
ATG4C-204ENST00000414558 USP7Q93009 1102 aa7.52□□□□□ -1.21
ATG4C-204ENST00000414558 ZNF503Q96F45 646 aa7.52□□□□□ -1.21
ATG4C-204ENST00000414558 KCNG1Q9UIX4 513 aa7.52□□□□□ -1.21
ATG4C-204ENST00000414558 KRTAP23-1A1A580 65 aa7.51□□□□□ -1.21
ATG4C-204ENST00000414558 CRHR2Q13324 411 aa7.51□□□□□ -1.21
ATG4C-204ENST00000414558 MFSD5Q6N075 450 aa7.51□□□□□ -1.21
ATG4C-204ENST00000414558 CXorf67Q86X51 503 aaPredicted RBP7.51□□□□□ -1.21
ATG4C-204ENST00000414558 SLC5A5Q92911 643 aa7.51□□□□□ -1.21
ATG4C-204ENST00000414558 MIEF2Q96C03 454 aa7.51□□□□□ -1.21
ATG4C-204ENST00000414558 CSRNP2Q9H175 543 aa7.51□□□□□ -1.21
ATG4C-204ENST00000414558 NRP1O14786 923 aa7.5□□□□□ -1.21
ATG4C-204ENST00000414558 KDM1AO60341 852 aa7.5□□□□□ -1.21
ATG4C-204ENST00000414558 GAAP10253 952 aa7.5□□□□□ -1.21
ATG4C-204ENST00000414558 BPIP17213 487 aa7.5□□□□□ -1.21
ATG4C-204ENST00000414558 XPAP23025 273 aaPredicted RBP7.5□□□□□ -1.21
ATG4C-204ENST00000414558 HSD3B2P26439 372 aa7.5□□□□□ -1.21
ATG4C-204ENST00000414558 NPEPPSP55786 919 aa7.5□□□□□ -1.21
ATG4C-204ENST00000414558 PTH1RQ03431 593 aa7.5□□□□□ -1.21
ATG4C-204ENST00000414558 ELAVL1Q15717 326 aaKnown RBP7.5□□□□□ -1.21
ATG4C-204ENST00000414558 ATP13A4Q4VNC1 1196 aa7.5□□□□□ -1.21
ATG4C-204ENST00000414558 FKBP15Q5T1M5 1219 aa7.5□□□□□ -1.21
ATG4C-204ENST00000414558 BROXQ5VW32 411 aa7.5□□□□□ -1.21
ATG4C-204ENST00000414558 SPTY2D1Q68D10 685 aaPredicted RBP7.5□□□□□ -1.21
ATG4C-204ENST00000414558 CMTM4Q8IZR5 234 aa7.5□□□□□ -1.21
ATG4C-204ENST00000414558 IL17DQ8TAD2 202 aa7.5□□□□□ -1.21
ATG4C-204ENST00000414558 GAB3Q8WWW8 586 aa7.5□□□□□ -1.21
ATG4C-204ENST00000414558 RSAD2Q8WXG1 361 aa7.5□□□□□ -1.21
ATG4C-204ENST00000414558 ARL8AQ96BM9 186 aa7.5□□□□□ -1.21
ATG4C-204ENST00000414558 MS4A5Q9H3V2 200 aa7.5□□□□□ -1.21
ATG4C-204ENST00000414558 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.5□□□□□ -1.21
ATG4C-204ENST00000414558 NCDNQ9UBB6 729 aa7.5□□□□□ -1.21
ATG4C-204ENST00000414558 USP18Q9UMW8 372 aa7.5□□□□□ -1.21
ATG4C-204ENST00000414558 NUMBLQ9Y6R0 609 aa7.5□□□□□ -1.21
ATG4C-204ENST00000414558 PRSS38A1L453 326 aa7.49□□□□□ -1.21
ATG4C-204ENST00000414558 LCHNA4D1U4 455 aa7.49□□□□□ -1.21
ATG4C-204ENST00000414558 CYR61O00622 381 aa7.49□□□□□ -1.21
ATG4C-204ENST00000414558 PLSCR1O15162 318 aa7.49□□□□□ -1.21
ATG4C-204ENST00000414558 SEC24DO94855 1032 aaPredicted RBP7.49□□□□□ -1.21
ATG4C-204ENST00000414558 NRG3P56975 720 aa7.49□□□□□ -1.21
ATG4C-204ENST00000414558 SPIDRQ14159 915 aa7.49□□□□□ -1.21
ATG4C-204ENST00000414558 DDX46Q7L014 1031 aaKnown RBP7.49□□□□□ -1.21
ATG4C-204ENST00000414558 RNF180Q86T96 592 aa7.49□□□□□ -1.21
ATG4C-204ENST00000414558 RASSF3Q86WH2 238 aa7.49□□□□□ -1.21
ATG4C-204ENST00000414558 THNSL2Q86YJ6 484 aa7.49□□□□□ -1.21
ATG4C-204ENST00000414558 IFT22Q9H7X7 185 aa7.49□□□□□ -1.21
ATG4C-204ENST00000414558 NOC2LQ9Y3T9 749 aaKnown RBP7.49□□□□□ -1.21
ATG4C-204ENST00000414558 PPP2R3BQ9Y5P8 575 aa7.49□□□□□ -1.21
ATG4C-204ENST00000414558 ZEB2O60315 1214 aa7.48□□□□□ -1.21
ATG4C-204ENST00000414558 ACVRL1P37023 503 aa7.48□□□□□ -1.21
ATG4C-204ENST00000414558 MANFP55145 182 aaKnown RBP7.48□□□□□ -1.21
ATG4C-204ENST00000414558 SDE2Q6IQ49 451 aa7.48□□□□□ -1.21
ATG4C-204ENST00000414558 GIMAP6Q6P9H5 292 aa7.48□□□□□ -1.21
ATG4C-204ENST00000414558 GSPT2Q8IYD1 628 aaKnown RBP7.48□□□□□ -1.21
ATG4C-204ENST00000414558 PLEKHG4BQ96PX9 1271 aa7.48□□□□□ -1.21
ATG4C-204ENST00000414558 TTC1Q99614 292 aa7.48□□□□□ -1.21
ATG4C-204ENST00000414558 ZNF703Q9H7S9 590 aaPredicted RBP7.48□□□□□ -1.21
ATG4C-204ENST00000414558 ULK1O75385 1050 aa7.47□□□□□ -1.21
ATG4C-204ENST00000414558 ALDH1A2O94788 518 aa7.47□□□□□ -1.21
ATG4C-204ENST00000414558 IPO13O94829 963 aaKnown RBP7.47□□□□□ -1.21
ATG4C-204ENST00000414558 LY86O95711 162 aa7.47□□□□□ -1.21
ATG4C-204ENST00000414558 SOX5P35711 763 aa7.47□□□□□ -1.21
ATG4C-204ENST00000414558 CD69Q07108 199 aa7.47□□□□□ -1.21
ATG4C-204ENST00000414558 PPARAQ07869 468 aa7.47□□□□□ -1.21
ATG4C-204ENST00000414558 RRP1BQ14684 758 aaKnown RBP7.47□□□□□ -1.21
ATG4C-204ENST00000414558 LMBR1LQ6UX01 489 aa7.47□□□□□ -1.21
ATG4C-204ENST00000414558 ZNF662Q6ZS27 426 aa7.47□□□□□ -1.21
ATG4C-204ENST00000414558 TMPRSS6Q8IU80 811 aa7.47□□□□□ -1.21
ATG4C-204ENST00000414558 PIK3C3Q8NEB9 887 aa7.47□□□□□ -1.21
ATG4C-204ENST00000414558 CACTINQ8WUQ7 758 aaKnown RBP7.47□□□□□ -1.21
ATG4C-204ENST00000414558 ZNF512Q96ME7 567 aaPredicted RBP7.47□□□□□ -1.21
ATG4C-204ENST00000414558 ANO3Q9BYT9 981 aa7.47□□□□□ -1.21
ATG4C-204ENST00000414558 SCAND2PQ9GZW5 306 aaPredicted RBP7.47□□□□□ -1.21
ATG4C-204ENST00000414558 CAAP1Q9H8G2 361 aa7.47□□□□□ -1.21
ATG4C-204ENST00000414558 PARPBPQ9NWS1 579 aa7.47□□□□□ -1.21
ATG4C-204ENST00000414558 HECAQ9UBI9 543 aaPredicted RBP7.47□□□□□ -1.21
ATG4C-204ENST00000414558 APOBEC2Q9Y235 224 aaKnown RBP7.47□□□□□ -1.21
ATG4C-204ENST00000414558 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.46□□□□□ -1.22
ATG4C-204ENST00000414558 NPIPB8E9PQR5 432 aa7.46□□□□□ -1.22
ATG4C-204ENST00000414558 MFAP3LO75121 409 aa7.46□□□□□ -1.22
ATG4C-204ENST00000414558 C1SP09871 688 aa7.46□□□□□ -1.22
ATG4C-204ENST00000414558 MAN2A2P49641 1150 aa7.46□□□□□ -1.22
ATG4C-204ENST00000414558 SESN3P58005 492 aa7.46□□□□□ -1.22
ATG4C-204ENST00000414558 CNGB1Q14028 1251 aaPredicted RBP7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms