RNA–Protein interactions for RNA: ENST00000413582.6

RFFL-203, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene RFFL, Length 1,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-203ENST00000413582 RTN1Q16799 776 aa10.79□□□□□ -0.68
RFFL-203ENST00000413582 NOMO2Q5JPE7 1267 aa10.79□□□□□ -0.68
RFFL-203ENST00000413582 JAKMIP3Q5VZ66 844 aa10.79□□□□□ -0.68
RFFL-203ENST00000413582 GLB1LQ6UWU2 654 aa10.79□□□□□ -0.68
RFFL-203ENST00000413582 NLRP7Q8WX94 980 aa10.79□□□□□ -0.68
RFFL-203ENST00000413582 LENG9Q96B70 501 aa10.79□□□□□ -0.68
RFFL-203ENST00000413582 KLHL5Q96PQ7 755 aa10.79□□□□□ -0.68
RFFL-203ENST00000413582 LSG1Q9H089 658 aaKnown RBP10.79□□□□□ -0.68
RFFL-203ENST00000413582 CHST12Q9NRB3 414 aa10.79□□□□□ -0.68
RFFL-203ENST00000413582 WNT16Q9UBV4 365 aa10.79□□□□□ -0.68
RFFL-203ENST00000413582 DNAJB4Q9UDY4 337 aa10.79□□□□□ -0.68
RFFL-203ENST00000413582 TCEAL9Q9UHQ7 104 aa10.79□□□□□ -0.68
RFFL-203ENST00000413582 INPP5FQ9Y2H2 1132 aa10.79□□□□□ -0.68
RFFL-203ENST00000413582 MIA3Q5JRA6 1907 aa10.78□□□□□ -0.68
RFFL-203ENST00000413582 WDR64B1ANS9 1081 aa10.78□□□□□ -0.68
RFFL-203ENST00000413582 ADAMTS3O15072 1205 aa10.78□□□□□ -0.68
RFFL-203ENST00000413582 LILRB3O75022 631 aa10.78□□□□□ -0.68
RFFL-203ENST00000413582 CFHP08603 1231 aa10.78□□□□□ -0.68
RFFL-203ENST00000413582 CNPP09543 421 aaKnown RBP10.78□□□□□ -0.68
RFFL-203ENST00000413582 TBC1D8BQ0IIM8 1120 aa10.78□□□□□ -0.68
RFFL-203ENST00000413582 LONRF3Q496Y0 759 aa10.78□□□□□ -0.68
RFFL-203ENST00000413582 CREB3L3Q68CJ9 461 aa10.78□□□□□ -0.68
RFFL-203ENST00000413582 TWF2Q6IBS0 349 aaKnown RBP10.78□□□□□ -0.68
RFFL-203ENST00000413582 CMASQ8NFW8 434 aaPredicted RBP10.78□□□□□ -0.68
RFFL-203ENST00000413582 RSAD2Q8WXG1 361 aa10.78□□□□□ -0.68
RFFL-203ENST00000413582 RIN2Q8WYP3 895 aaPredicted RBP10.78□□□□□ -0.68
RFFL-203ENST00000413582 EMILIN2Q9BXX0 1053 aa10.78□□□□□ -0.68
RFFL-203ENST00000413582 TBC1D17Q9HA65 648 aa10.78□□□□□ -0.68
RFFL-203ENST00000413582 EPS15L1Q9UBC2 864 aa10.78□□□□□ -0.68
RFFL-203ENST00000413582 SAMM50Q9Y512 469 aa10.78□□□□□ -0.68
RFFL-203ENST00000413582 V9GY48 417 aaPredicted RBP10.78□□□□□ -0.68
RFFL-203ENST00000413582 DOCK6Q96HP0 2047 aa10.78□□□□□ -0.68
RFFL-203ENST00000413582 MAP1BP46821 2468 aaKnown RBP10.78□□□□□ -0.68
RFFL-203ENST00000413582 MTCL1Q9Y4B5 1905 aaKnown RBP10.78□□□□□ -0.68
RFFL-203ENST00000413582 ESYT2A0FGR8 921 aa10.77□□□□□ -0.69
RFFL-203ENST00000413582 OFD1O75665 1012 aa10.77□□□□□ -0.69
RFFL-203ENST00000413582 SSBP05455 408 aaKnown RBP eCLIP10.77□□□□□ -0.69
RFFL-203ENST00000413582 SRFP11831 508 aa10.77□□□□□ -0.69
RFFL-203ENST00000413582 SFPQP23246 707 aaKnown RBP eCLIP10.77□□□□□ -0.69
RFFL-203ENST00000413582 KLRC2P26717 231 aa10.77□□□□□ -0.69
RFFL-203ENST00000413582 CIITAP33076 1130 aa10.77□□□□□ -0.69
RFFL-203ENST00000413582 RAB27AP51159 221 aa10.77□□□□□ -0.69
RFFL-203ENST00000413582 RNASELQ05823 741 aaKnown RBP10.77□□□□□ -0.69
RFFL-203ENST00000413582 PUM1Q14671 1186 aaKnown RBP eCLIP10.77□□□□□ -0.69
RFFL-203ENST00000413582 TARBP2Q15633 366 aaKnown RBP10.77□□□□□ -0.69
RFFL-203ENST00000413582 PRR16Q569H4 304 aa10.77□□□□□ -0.69
RFFL-203ENST00000413582 SYNE3Q6ZMZ3 975 aa10.77□□□□□ -0.69
RFFL-203ENST00000413582 ZNF280BQ86YH2 543 aa10.77□□□□□ -0.69
RFFL-203ENST00000413582 RHOBTB2Q9BYZ6 727 aa10.77□□□□□ -0.69
RFFL-203ENST00000413582 GCOM2Q9BZD3 368 aaPredicted RBP10.77□□□□□ -0.69
RFFL-203ENST00000413582 GBP3Q9H0R5 595 aa10.77□□□□□ -0.69
RFFL-203ENST00000413582 WDR6Q9NNW5 1121 aaKnown RBP10.77□□□□□ -0.69
RFFL-203ENST00000413582 MAN1C1Q9NR34 630 aa10.77□□□□□ -0.69
RFFL-203ENST00000413582 DISC1Q9NRI5 854 aa10.77□□□□□ -0.69
RFFL-203ENST00000413582 FAM217BQ9NTX9 383 aaPredicted RBP10.77□□□□□ -0.69
RFFL-203ENST00000413582 FAM105AQ9NUU6 356 aa10.77□□□□□ -0.69
RFFL-203ENST00000413582 DLL3Q9NYJ7 618 aa10.77□□□□□ -0.69
RFFL-203ENST00000413582 DLGAP2Q9P1A6 1054 aa10.77□□□□□ -0.69
RFFL-203ENST00000413582 STK39Q9UEW8 545 aa10.77□□□□□ -0.69
RFFL-203ENST00000413582 BRPF3Q9ULD4 1205 aa10.77□□□□□ -0.69
RFFL-203ENST00000413582 CA14Q9ULX7 337 aa10.77□□□□□ -0.69
RFFL-203ENST00000413582 PIN4Q9Y237 131 aaKnown RBP10.77□□□□□ -0.69
RFFL-203ENST00000413582 CLUHO75153 1309 aa10.77□□□□□ -0.69
RFFL-203ENST00000413582 PATJQ8NI35 1801 aa10.77□□□□□ -0.69
RFFL-203ENST00000413582 MYH15Q9Y2K3 1946 aa10.76□□□□□ -0.69
RFFL-203ENST00000413582 A0A087WZ62 844 aa10.76□□□□□ -0.69
RFFL-203ENST00000413582 GOLGA8AA7E2F4 631 aa10.76□□□□□ -0.69
RFFL-203ENST00000413582 GOLGA8BA8MQT2 603 aa10.76□□□□□ -0.69
RFFL-203ENST00000413582 STK25O00506 426 aa10.76□□□□□ -0.69
RFFL-203ENST00000413582 ZBTB43O43298 467 aa10.76□□□□□ -0.69
RFFL-203ENST00000413582 ZNF623O75123 536 aa10.76□□□□□ -0.69
RFFL-203ENST00000413582 SP9P0CG40 484 aa10.76□□□□□ -0.69
RFFL-203ENST00000413582 SKIP12755 728 aa10.76□□□□□ -0.69
RFFL-203ENST00000413582 RFX1P22670 979 aa10.76□□□□□ -0.69
RFFL-203ENST00000413582 GBP2P32456 591 aaPredicted RBP10.76□□□□□ -0.69
RFFL-203ENST00000413582 NECTIN1Q15223 517 aa10.76□□□□□ -0.69
RFFL-203ENST00000413582 NONOQ15233 471 aaKnown RBP eCLIP10.76□□□□□ -0.69
RFFL-203ENST00000413582 PFKFB3Q16875 520 aaPredicted RBP10.76□□□□□ -0.69
RFFL-203ENST00000413582 ZC3H14Q6PJT7 736 aaKnown RBP10.76□□□□□ -0.69
RFFL-203ENST00000413582 REXO1Q8N1G1 1221 aaKnown RBP10.76□□□□□ -0.69
RFFL-203ENST00000413582 SLC44A3Q8N4M1 653 aa10.76□□□□□ -0.69
RFFL-203ENST00000413582 RUBCNQ92622 972 aa10.76□□□□□ -0.69
RFFL-203ENST00000413582 STAMQ92783 540 aa10.76□□□□□ -0.69
RFFL-203ENST00000413582 TCEANC2Q96MN5 208 aa10.76□□□□□ -0.69
RFFL-203ENST00000413582 MYADMQ96S97 322 aa10.76□□□□□ -0.69
RFFL-203ENST00000413582 CEP89Q96ST8 783 aa10.76□□□□□ -0.69
RFFL-203ENST00000413582 HINFPQ9BQA5 517 aa10.76□□□□□ -0.69
RFFL-203ENST00000413582 FDXACB1Q9BRP7 624 aaPredicted RBP10.76□□□□□ -0.69
RFFL-203ENST00000413582 ZMYND12Q9H0C1 365 aa10.76□□□□□ -0.69
RFFL-203ENST00000413582 ARHGEF3Q9NR81 526 aa10.76□□□□□ -0.69
RFFL-203ENST00000413582 MRPL17Q9NRX2 175 aaKnown RBP10.76□□□□□ -0.69
RFFL-203ENST00000413582 NRBP2Q9NSY0 501 aa10.76□□□□□ -0.69
RFFL-203ENST00000413582 IGKV6-21A0A0C4DH24 114 aa10.75□□□□□ -0.69
RFFL-203ENST00000413582 TMEM150BA6NC51 233 aa10.75□□□□□ -0.69
RFFL-203ENST00000413582 INPPL1O15357 1258 aa10.75□□□□□ -0.69
RFFL-203ENST00000413582 MSH4O15457 936 aa10.75□□□□□ -0.69
RFFL-203ENST00000413582 TEX28O15482 410 aa10.75□□□□□ -0.69
RFFL-203ENST00000413582 CHMP2AO43633 222 aa10.75□□□□□ -0.69
RFFL-203ENST00000413582 EDIL3O43854 480 aa10.75□□□□□ -0.69
RFFL-203ENST00000413582 DDHD2O94830 711 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms