RNA–Protein interactions for RNA: ENST00000412141.1

LINC00963-201, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best)

Gene LINC00963, Length 739 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-201ENST00000412141 MTRQ99707 1265 aa12.93□□□□□ -0.34
LINC00963-201ENST00000412141 HSD17B14Q9BPX1 270 aa12.93□□□□□ -0.34
LINC00963-201ENST00000412141 LLPHQ9BRT6 129 aaKnown RBP12.93□□□□□ -0.34
LINC00963-201ENST00000412141 XPNPEP1Q9NQW7 623 aa12.93□□□□□ -0.34
LINC00963-201ENST00000412141 ENTPD7Q9NQZ7 604 aa12.93□□□□□ -0.34
LINC00963-201ENST00000412141 PUF60Q9UHX1 559 aaKnown RBP12.93□□□□□ -0.34
LINC00963-201ENST00000412141 BARX2Q9UMQ3 279 aaPredicted RBP12.93□□□□□ -0.34
LINC00963-201ENST00000412141 FAM86C2PA6NEL3 165 aa12.92□□□□□ -0.34
LINC00963-201ENST00000412141 USO1O60763 962 aaKnown RBP12.92□□□□□ -0.34
LINC00963-201ENST00000412141 ZC3H11AO75152 810 aaKnown RBP eCLIP12.92□□□□□ -0.34
LINC00963-201ENST00000412141 BCAR1P56945 870 aa12.92□□□□□ -0.34
LINC00963-201ENST00000412141 RNASELQ05823 741 aaKnown RBP12.92□□□□□ -0.34
LINC00963-201ENST00000412141 COL19A1Q14993 1142 aa12.92□□□□□ -0.34
LINC00963-201ENST00000412141 CSPP1Q1MSJ5 1256 aa12.92□□□□□ -0.34
LINC00963-201ENST00000412141 PUS10Q3MIT2 529 aaKnown RBP12.92□□□□□ -0.34
LINC00963-201ENST00000412141 GLB1LQ6UWU2 654 aa12.92□□□□□ -0.34
LINC00963-201ENST00000412141 TMC7Q7Z402 723 aa12.92□□□□□ -0.34
LINC00963-201ENST00000412141 FERMT3Q86UX7 667 aa12.92□□□□□ -0.34
LINC00963-201ENST00000412141 EXOC8Q8IYI6 725 aa12.92□□□□□ -0.34
LINC00963-201ENST00000412141 EFHBQ8N7U6 833 aa12.92□□□□□ -0.34
LINC00963-201ENST00000412141 FBXO18Q8NFZ0 1043 aa12.92□□□□□ -0.34
LINC00963-201ENST00000412141 ASAP3Q8TDY4 903 aa12.92□□□□□ -0.34
LINC00963-201ENST00000412141 TCP11Q8WWU5 503 aa12.92□□□□□ -0.34
LINC00963-201ENST00000412141 CPB2Q96IY4 423 aa12.92□□□□□ -0.34
LINC00963-201ENST00000412141 TCF25Q9BQ70 676 aa12.92□□□□□ -0.34
LINC00963-201ENST00000412141 APOL5Q9BWW9 433 aa12.92□□□□□ -0.34
LINC00963-201ENST00000412141 SH2B1Q9NRF2 756 aaPredicted RBP12.92□□□□□ -0.34
LINC00963-201ENST00000412141 FAM105AQ9NUU6 356 aa12.92□□□□□ -0.34
LINC00963-201ENST00000412141 SPG21Q9NZD8 308 aa12.92□□□□□ -0.34
LINC00963-201ENST00000412141 CD207Q9UJ71 328 aa12.92□□□□□ -0.34
LINC00963-201ENST00000412141 FAM50BQ9Y247 325 aa12.92□□□□□ -0.34
LINC00963-201ENST00000412141 PCDHB2Q9Y5E7 798 aa12.92□□□□□ -0.34
LINC00963-201ENST00000412141 ATG2AQ2TAZ0 1938 aa12.92□□□□□ -0.34
LINC00963-201ENST00000412141 HIDE1A8MVS5 230 aa12.91□□□□□ -0.34
LINC00963-201ENST00000412141 INO80B-WBP1J3KQ70 363 aa12.91□□□□□ -0.34
LINC00963-201ENST00000412141 MED24O75448 989 aa12.91□□□□□ -0.34
LINC00963-201ENST00000412141 ALDH7A1P49419 539 aaKnown RBP12.91□□□□□ -0.34
LINC00963-201ENST00000412141 RBM25P49756 843 aaKnown RBP12.91□□□□□ -0.34
LINC00963-201ENST00000412141 HMGN5P82970 282 aaKnown RBP12.91□□□□□ -0.34
LINC00963-201ENST00000412141 KRT17Q04695 432 aa12.91□□□□□ -0.34
LINC00963-201ENST00000412141 UBE3AQ05086 875 aa12.91□□□□□ -0.34
LINC00963-201ENST00000412141 NOMO2Q5JPE7 1267 aa12.91□□□□□ -0.34
LINC00963-201ENST00000412141 TTC38Q5R3I4 469 aa12.91□□□□□ -0.34
LINC00963-201ENST00000412141 SRGAP1Q7Z6B7 1085 aa12.91□□□□□ -0.34
LINC00963-201ENST00000412141 MRPS27Q92552 414 aaKnown RBP12.91□□□□□ -0.34
LINC00963-201ENST00000412141 LRFN3Q9BTN0 628 aa12.91□□□□□ -0.34
LINC00963-201ENST00000412141 POLR3FQ9H1D9 316 aaPredicted RBP12.91□□□□□ -0.34
LINC00963-201ENST00000412141 POLD4Q9HCU8 107 aa12.91□□□□□ -0.34
LINC00963-201ENST00000412141 GPRC5CQ9NQ84 441 aa12.91□□□□□ -0.34
LINC00963-201ENST00000412141 ANKEF1Q9NU02 776 aa12.91□□□□□ -0.34
LINC00963-201ENST00000412141 AGPAT5Q9NUQ2 364 aa12.91□□□□□ -0.34
LINC00963-201ENST00000412141 CLEC1BQ9P126 229 aa12.91□□□□□ -0.34
LINC00963-201ENST00000412141 PPME1Q9Y570 386 aa12.91□□□□□ -0.34
LINC00963-201ENST00000412141 PLXNA4Q9HCM2 1894 aa12.91□□□□□ -0.34
LINC00963-201ENST00000412141 ASAP2O43150 1006 aa12.9□□□□□ -0.34
LINC00963-201ENST00000412141 MBTPS2O43462 519 aa12.9□□□□□ -0.34
LINC00963-201ENST00000412141 OFD1O75665 1012 aa12.9□□□□□ -0.34
LINC00963-201ENST00000412141 ERLIN2O94905 339 aa12.9□□□□□ -0.34
LINC00963-201ENST00000412141 LYPLA2O95372 231 aa12.9□□□□□ -0.34
LINC00963-201ENST00000412141 GLP2RO95838 553 aa12.9□□□□□ -0.34
LINC00963-201ENST00000412141 OR52Z1P0C646 297 aa12.9□□□□□ -0.34
LINC00963-201ENST00000412141 SPATA31C1P0DKV0 1188 aa12.9□□□□□ -0.34
LINC00963-201ENST00000412141 SKIP12755 728 aa12.9□□□□□ -0.34
LINC00963-201ENST00000412141 HOXA11P31270 313 aaPredicted RBP12.9□□□□□ -0.34
LINC00963-201ENST00000412141 PPM1AP35813 382 aa12.9□□□□□ -0.34
LINC00963-201ENST00000412141 PLA2G5P39877 138 aa12.9□□□□□ -0.34
LINC00963-201ENST00000412141 RARRES1P49788 294 aa12.9□□□□□ -0.34
LINC00963-201ENST00000412141 AFF1P51825 1210 aaKnown RBP12.9□□□□□ -0.34
LINC00963-201ENST00000412141 PLCB3Q01970 1234 aa12.9□□□□□ -0.34
LINC00963-201ENST00000412141 RABEP1Q15276 862 aa12.9□□□□□ -0.34
LINC00963-201ENST00000412141 MCTP1Q6DN14 999 aa12.9□□□□□ -0.34
LINC00963-201ENST00000412141 POTEGQ6S5H5 508 aa12.9□□□□□ -0.34
LINC00963-201ENST00000412141 TMEM173Q86WV6 379 aaPredicted RBP12.9□□□□□ -0.34
LINC00963-201ENST00000412141 CDR2LQ86X02 465 aaPredicted RBP12.9□□□□□ -0.34
LINC00963-201ENST00000412141 CATSPER3Q86XQ3 398 aa12.9□□□□□ -0.34
LINC00963-201ENST00000412141 ZNF280BQ86YH2 543 aa12.9□□□□□ -0.34
LINC00963-201ENST00000412141 NOSTRINQ8IVI9 506 aa12.9□□□□□ -0.34
LINC00963-201ENST00000412141 VN1R2Q8NFZ6 395 aa12.9□□□□□ -0.34
LINC00963-201ENST00000412141 AUTS2Q8WXX7 1259 aa12.9□□□□□ -0.34
LINC00963-201ENST00000412141 APOL6Q9BWW8 343 aa12.9□□□□□ -0.34
LINC00963-201ENST00000412141 EIF2AQ9BY44 585 aaKnown RBP12.9□□□□□ -0.34
LINC00963-201ENST00000412141 MRPL9Q9BYD2 267 aaKnown RBP12.9□□□□□ -0.34
LINC00963-201ENST00000412141 FOXP1Q9H334 677 aaPredicted RBP12.9□□□□□ -0.34
LINC00963-201ENST00000412141 C11orf16Q9NQ32 467 aa12.9□□□□□ -0.34
LINC00963-201ENST00000412141 TBC1D13Q9NVG8 400 aa12.9□□□□□ -0.34
LINC00963-201ENST00000412141 DNAJB4Q9UDY4 337 aa12.9□□□□□ -0.34
LINC00963-201ENST00000412141 LRRIQ4A6NIV6 560 aa12.89□□□□□ -0.35
LINC00963-201ENST00000412141 FSCN2O14926 492 aa12.89□□□□□ -0.35
LINC00963-201ENST00000412141 GAS2O43903 313 aaKnown RBP12.89□□□□□ -0.35
LINC00963-201ENST00000412141 DGAT1O75907 488 aa12.89□□□□□ -0.35
LINC00963-201ENST00000412141 CXCL14O95715 111 aa12.89□□□□□ -0.35
LINC00963-201ENST00000412141 POMCP01189 267 aa12.89□□□□□ -0.35
LINC00963-201ENST00000412141 LIG1P18858 919 aa12.89□□□□□ -0.35
LINC00963-201ENST00000412141 GLRA2P23416 452 aa12.89□□□□□ -0.35
LINC00963-201ENST00000412141 RAB27AP51159 221 aa12.89□□□□□ -0.35
LINC00963-201ENST00000412141 PTENP60484 403 aa12.89□□□□□ -0.35
LINC00963-201ENST00000412141 SMAD4Q13485 552 aaKnown RBP12.89□□□□□ -0.35
LINC00963-201ENST00000412141 CAPSQ13938 189 aa12.89□□□□□ -0.35
LINC00963-201ENST00000412141 TFDP1Q14186 410 aa12.89□□□□□ -0.35
LINC00963-201ENST00000412141 MXD4Q14582 209 aaPredicted RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms