RNA–Protein interactions for RNA: ENST00000411973.3

TRAPPC12-203, Transcript of trafficking protein particle complex 12, humanhuman

TSL 5

Gene TRAPPC12, Length 838 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-203ENST00000411973 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.06■□□□□ 0.32
TRAPPC12-203ENST00000411973 CATSPER4Q7RTX7 472 aa17.06■□□□□ 0.32
TRAPPC12-203ENST00000411973 SPIRE2Q8WWL2 714 aa17.06■□□□□ 0.32
TRAPPC12-203ENST00000411973 LINC01599Q8WXQ3 324 aa17.06■□□□□ 0.32
TRAPPC12-203ENST00000411973 MRPS27Q92552 414 aaKnown RBP17.06■□□□□ 0.32
TRAPPC12-203ENST00000411973 RGS18Q9NS28 235 aa17.06■□□□□ 0.32
TRAPPC12-203ENST00000411973 LARSQ9P2J5 1176 aaKnown RBP17.06■□□□□ 0.32
TRAPPC12-203ENST00000411973 ADGRA3Q8IWK6 1321 aa17.05■□□□□ 0.32
TRAPPC12-203ENST00000411973 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.05■□□□□ 0.32
TRAPPC12-203ENST00000411973 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.05■□□□□ 0.32
TRAPPC12-203ENST00000411973 MGEA5O60502 916 aa17.05■□□□□ 0.32
TRAPPC12-203ENST00000411973 KRT18P05783 430 aaKnown RBP17.05■□□□□ 0.32
TRAPPC12-203ENST00000411973 ATP2A2P16615 1042 aaKnown RBP17.05■□□□□ 0.32
TRAPPC12-203ENST00000411973 ZSCAN20P17040 1043 aaPredicted RBP17.05■□□□□ 0.32
TRAPPC12-203ENST00000411973 EFNA5P52803 228 aa17.05■□□□□ 0.32
TRAPPC12-203ENST00000411973 DEFB103AP81534 67 aa17.05■□□□□ 0.32
TRAPPC12-203ENST00000411973 AMHR2Q16671 573 aa17.05■□□□□ 0.32
TRAPPC12-203ENST00000411973 FAM187BQ17R55 369 aa17.05■□□□□ 0.32
TRAPPC12-203ENST00000411973 CSPP1Q1MSJ5 1256 aa17.05■□□□□ 0.32
TRAPPC12-203ENST00000411973 HABP4Q5JVS0 413 aaKnown RBP17.05■□□□□ 0.32
TRAPPC12-203ENST00000411973 PPP4R3CPQ6ZMV5 832 aa17.05■□□□□ 0.32
TRAPPC12-203ENST00000411973 ZBTB8OSQ8IWT0 167 aa17.05■□□□□ 0.32
TRAPPC12-203ENST00000411973 DDX12PQ92771 950 aa17.05■□□□□ 0.32
TRAPPC12-203ENST00000411973 KCNN1Q92952 543 aa17.05■□□□□ 0.32
TRAPPC12-203ENST00000411973 TOP1MTQ969P6 601 aa17.05■□□□□ 0.32
TRAPPC12-203ENST00000411973 DNAJC19Q96DA6 116 aa17.05■□□□□ 0.32
TRAPPC12-203ENST00000411973 ADAM2Q99965 735 aa17.05■□□□□ 0.32
TRAPPC12-203ENST00000411973 TRAIPQ9BWF2 469 aa17.05■□□□□ 0.32
TRAPPC12-203ENST00000411973 LRRC27Q9C0I9 530 aa17.05■□□□□ 0.32
TRAPPC12-203ENST00000411973 FZD8Q9H461 694 aa17.05■□□□□ 0.32
TRAPPC12-203ENST00000411973 C1orf112Q9NSG2 853 aa17.05■□□□□ 0.32
TRAPPC12-203ENST00000411973 AGPAT5Q9NUQ2 364 aa17.05■□□□□ 0.32
TRAPPC12-203ENST00000411973 USP25Q9UHP3 1055 aa17.05■□□□□ 0.32
TRAPPC12-203ENST00000411973 PHLPP2Q6ZVD8 1323 aa17.04■□□□□ 0.32
TRAPPC12-203ENST00000411973 GBF1Q92538 1859 aa17.04■□□□□ 0.32
TRAPPC12-203ENST00000411973 DENND3A2RUS2 1198 aa17.04■□□□□ 0.32
TRAPPC12-203ENST00000411973 GOLGA6L4A6NEF3 574 aa17.04■□□□□ 0.32
TRAPPC12-203ENST00000411973 SFI1A8K8P3 1242 aa17.04■□□□□ 0.32
TRAPPC12-203ENST00000411973 INO80B-WBP1J3KQ70 363 aa17.04■□□□□ 0.32
TRAPPC12-203ENST00000411973 SLFN14P0C7P3 912 aa17.04■□□□□ 0.32
TRAPPC12-203ENST00000411973 AXLP30530 894 aa17.04■□□□□ 0.32
TRAPPC12-203ENST00000411973 HOXA11P31270 313 aaPredicted RBP17.04■□□□□ 0.32
TRAPPC12-203ENST00000411973 NDUFA8P51970 172 aa17.04■□□□□ 0.32
TRAPPC12-203ENST00000411973 SMAD3P84022 425 aaKnown RBP17.04■□□□□ 0.32
TRAPPC12-203ENST00000411973 AMPD3Q01432 767 aa17.04■□□□□ 0.32
TRAPPC12-203ENST00000411973 CACNB1Q02641 598 aaPredicted RBP17.04■□□□□ 0.32
TRAPPC12-203ENST00000411973 FAM109BQ6ICB4 259 aaPredicted RBP17.04■□□□□ 0.32
TRAPPC12-203ENST00000411973 CNNM4Q6P4Q7 775 aa17.04■□□□□ 0.32
TRAPPC12-203ENST00000411973 CLEC17AQ6ZS10 378 aa17.04■□□□□ 0.32
TRAPPC12-203ENST00000411973 SLC24A5Q71RS6 500 aa17.04■□□□□ 0.32
TRAPPC12-203ENST00000411973 HERC6Q8IVU3 1022 aa17.04■□□□□ 0.32
TRAPPC12-203ENST00000411973 CRIPAKQ8N1N5 446 aa17.04■□□□□ 0.32
TRAPPC12-203ENST00000411973 FSIP1Q8NA03 581 aa17.04■□□□□ 0.32
TRAPPC12-203ENST00000411973 TMEM87AQ8NBN3 555 aa17.04■□□□□ 0.32
TRAPPC12-203ENST00000411973 DEPTORQ8TB45 409 aa17.04■□□□□ 0.32
TRAPPC12-203ENST00000411973 PRIMPOLQ96LW4 560 aa17.04■□□□□ 0.32
TRAPPC12-203ENST00000411973 CCDC113Q9H0I3 377 aa17.04■□□□□ 0.32
TRAPPC12-203ENST00000411973 PARVGQ9HBI0 331 aa17.04■□□□□ 0.32
TRAPPC12-203ENST00000411973 PRMT7Q9NVM4 692 aaPredicted RBP17.04■□□□□ 0.32
TRAPPC12-203ENST00000411973 DACT1Q9NYF0 836 aa17.04■□□□□ 0.32
TRAPPC12-203ENST00000411973 ARHGAP28Q9P2N2 729 aa17.04■□□□□ 0.32
TRAPPC12-203ENST00000411973 CCDC169A6NNP5 214 aa17.03■□□□□ 0.32
TRAPPC12-203ENST00000411973 C9IYK1 514 aa17.03■□□□□ 0.32
TRAPPC12-203ENST00000411973 ACTN4O43707 911 aaKnown RBP17.03■□□□□ 0.32
TRAPPC12-203ENST00000411973 TSPAN1O60635 241 aa17.03■□□□□ 0.32
TRAPPC12-203ENST00000411973 TBCAO75347 108 aaKnown RBP17.03■□□□□ 0.32
TRAPPC12-203ENST00000411973 ERLIN2O94905 339 aa17.03■□□□□ 0.32
TRAPPC12-203ENST00000411973 FAM13AO94988 1023 aa17.03■□□□□ 0.32
TRAPPC12-203ENST00000411973 GJB5O95377 273 aa17.03■□□□□ 0.32
TRAPPC12-203ENST00000411973 SYKP43405 635 aa17.03■□□□□ 0.32
TRAPPC12-203ENST00000411973 SMTNP53814 917 aa17.03■□□□□ 0.32
TRAPPC12-203ENST00000411973 FAM189BP81408 668 aa17.03■□□□□ 0.32
TRAPPC12-203ENST00000411973 NCBP1Q09161 790 aaKnown RBP17.03■□□□□ 0.32
TRAPPC12-203ENST00000411973 MAPK6Q16659 721 aa17.03■□□□□ 0.32
TRAPPC12-203ENST00000411973 DYMQ7RTS9 669 aa17.03■□□□□ 0.32
TRAPPC12-203ENST00000411973 MYOCDQ8IZQ8 938 aa17.03■□□□□ 0.32
TRAPPC12-203ENST00000411973 KIFC3Q9BVG8 833 aa17.03■□□□□ 0.32
TRAPPC12-203ENST00000411973 TMEM134Q9H6X4 195 aa17.03■□□□□ 0.32
TRAPPC12-203ENST00000411973 KMT5AQ9NQR1 393 aa17.03■□□□□ 0.32
TRAPPC12-203ENST00000411973 RNF216Q9NWF9 866 aaPredicted RBP17.03■□□□□ 0.32
TRAPPC12-203ENST00000411973 PIN4Q9Y237 131 aaKnown RBP17.03■□□□□ 0.32
TRAPPC12-203ENST00000411973 A0A0U1RQF3 1178 aa17.02■□□□□ 0.32
TRAPPC12-203ENST00000411973 FRMD3A2A2Y4 597 aa17.02■□□□□ 0.32
TRAPPC12-203ENST00000411973 GRXCR1A8MXD5 290 aa17.02■□□□□ 0.32
TRAPPC12-203ENST00000411973 H0YCG3 227 aa17.02■□□□□ 0.32
TRAPPC12-203ENST00000411973 ACKR2O00590 384 aa17.02■□□□□ 0.32
TRAPPC12-203ENST00000411973 SCP2P22307 547 aa17.02■□□□□ 0.32
TRAPPC12-203ENST00000411973 SARSP49591 514 aaKnown RBP17.02■□□□□ 0.32
TRAPPC12-203ENST00000411973 NCKAP1LP55160 1127 aa17.02■□□□□ 0.32
TRAPPC12-203ENST00000411973 LONRF3Q496Y0 759 aa17.02■□□□□ 0.32
TRAPPC12-203ENST00000411973 CEP57L1Q8IYX8 460 aa17.02■□□□□ 0.32
TRAPPC12-203ENST00000411973 MYCT1Q8N699 235 aa17.02■□□□□ 0.32
TRAPPC12-203ENST00000411973 TMEM161BQ8NDZ6 487 aa17.02■□□□□ 0.32
TRAPPC12-203ENST00000411973 CCDC51Q96ER9 411 aa17.02■□□□□ 0.32
TRAPPC12-203ENST00000411973 C7orf25Q9BPX7 421 aa17.02■□□□□ 0.32
TRAPPC12-203ENST00000411973 TRIM9Q9C026 710 aa17.02■□□□□ 0.32
TRAPPC12-203ENST00000411973 GOLPH3LQ9H4A5 285 aa17.02■□□□□ 0.32
TRAPPC12-203ENST00000411973 SERTAD1Q9UHV2 236 aa17.02■□□□□ 0.32
TRAPPC12-203ENST00000411973 CNTNAP2Q9UHC6 1331 aa17.01■□□□□ 0.31
TRAPPC12-203ENST00000411973 A0A1B0GUA9 196 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms