RNA–Protein interactions for RNA: ENST00000411767.6

PTPN13-202, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-202ENST00000411767 ARMT1Q9H993 441 aa4.86□□□□□ -1.63
PTPN13-202ENST00000411767 EXOSC4Q9NPD3 245 aaKnown RBP4.86□□□□□ -1.63
PTPN13-202ENST00000411767 NLRP2Q9NX02 1062 aa4.86□□□□□ -1.63
PTPN13-202ENST00000411767 PIPSLA2A3N6 862 aa4.86□□□□□ -1.63
PTPN13-202ENST00000411767 IKBKBO14920 756 aa4.86□□□□□ -1.63
PTPN13-202ENST00000411767 SCAMP1O15126 338 aa4.86□□□□□ -1.63
PTPN13-202ENST00000411767 DYRK3O43781 588 aa4.86□□□□□ -1.63
PTPN13-202ENST00000411767 HAUS5O94927 633 aa4.86□□□□□ -1.63
PTPN13-202ENST00000411767 NFKB1P19838 968 aa4.86□□□□□ -1.63
PTPN13-202ENST00000411767 TUBA4AP68366 448 aa4.86□□□□□ -1.63
PTPN13-202ENST00000411767 IL18R1Q13478 541 aa4.86□□□□□ -1.63
PTPN13-202ENST00000411767 ZNF846Q147U1 533 aa4.86□□□□□ -1.63
PTPN13-202ENST00000411767 FASTKD5Q7L8L6 764 aaKnown RBP4.86□□□□□ -1.63
PTPN13-202ENST00000411767 NET1Q7Z628 596 aaPredicted RBP4.86□□□□□ -1.63
PTPN13-202ENST00000411767 CRLF3Q8IUI8 442 aa4.86□□□□□ -1.63
PTPN13-202ENST00000411767 C10orf107Q8IVU9 208 aa4.86□□□□□ -1.63
PTPN13-202ENST00000411767 SYT2Q8N9I0 419 aaPredicted RBP4.86□□□□□ -1.63
PTPN13-202ENST00000411767 RNFT2Q96EX2 444 aa4.86□□□□□ -1.63
PTPN13-202ENST00000411767 TRIM54Q9BYV2 358 aa4.86□□□□□ -1.63
PTPN13-202ENST00000411767 CAB39LQ9H9S4 337 aa4.86□□□□□ -1.63
PTPN13-202ENST00000411767 RUVBL2Q9Y230 463 aaKnown RBP4.86□□□□□ -1.63
PTPN13-202ENST00000411767 ZNF879B4DU55 563 aa4.86□□□□□ -1.63
PTPN13-202ENST00000411767 RNF103O00237 685 aa4.86□□□□□ -1.63
PTPN13-202ENST00000411767 MAPK13O15264 365 aa4.86□□□□□ -1.63
PTPN13-202ENST00000411767 PCDHGA12O60330 932 aa4.86□□□□□ -1.63
PTPN13-202ENST00000411767 APOL3O95236 402 aa4.86□□□□□ -1.63
PTPN13-202ENST00000411767 LDOC1O95751 146 aaPredicted RBP4.86□□□□□ -1.63
PTPN13-202ENST00000411767 SERPINB4P48594 390 aa4.86□□□□□ -1.63
PTPN13-202ENST00000411767 GMFBP60983 142 aa4.86□□□□□ -1.63
PTPN13-202ENST00000411767 BST2Q10589 180 aaKnown RBP4.86□□□□□ -1.63
PTPN13-202ENST00000411767 SLC29A2Q14542 456 aa4.86□□□□□ -1.63
PTPN13-202ENST00000411767 TAF1BQ53T94 588 aaPredicted RBP4.86□□□□□ -1.63
PTPN13-202ENST00000411767 CCSAPQ6IQ19 270 aaPredicted RBP4.86□□□□□ -1.63
PTPN13-202ENST00000411767 TAS2R42Q7RTR8 314 aa4.86□□□□□ -1.63
PTPN13-202ENST00000411767 CHD1LQ86WJ1 897 aa4.86□□□□□ -1.63
PTPN13-202ENST00000411767 NT5DC4Q86YG4 428 aa4.86□□□□□ -1.63
PTPN13-202ENST00000411767 ZCCHC7Q8N3Z6 543 aaKnown RBP4.86□□□□□ -1.63
PTPN13-202ENST00000411767 PJA1Q8NG27 643 aa4.86□□□□□ -1.63
PTPN13-202ENST00000411767 DYDC2Q96IM9 177 aa4.86□□□□□ -1.63
PTPN13-202ENST00000411767 PSD3Q9NYI0 1048 aa4.86□□□□□ -1.63
PTPN13-202ENST00000411767 PHF11Q9UIL8 331 aa4.86□□□□□ -1.63
PTPN13-202ENST00000411767 MAFFQ9ULX9 164 aa4.86□□□□□ -1.63
PTPN13-202ENST00000411767 BICRAQ9NZM4 1560 aa4.86□□□□□ -1.63
PTPN13-202ENST00000411767 SMARCA4P51532 1647 aa4.86□□□□□ -1.63
PTPN13-202ENST00000411767 LRRC53A6NM62 1247 aa4.86□□□□□ -1.63
PTPN13-202ENST00000411767 MOCS3O95396 460 aa4.86□□□□□ -1.63
PTPN13-202ENST00000411767 KRT19P08727 400 aa4.86□□□□□ -1.63
PTPN13-202ENST00000411767 RPSAP08865 295 aaKnown RBP4.86□□□□□ -1.63
PTPN13-202ENST00000411767 GNAT2P19087 354 aa4.86□□□□□ -1.63
PTPN13-202ENST00000411767 GSTM2P28161 218 aa4.86□□□□□ -1.63
PTPN13-202ENST00000411767 FAM83BQ5T0W9 1011 aa4.86□□□□□ -1.63
PTPN13-202ENST00000411767 TBC1D9Q6ZT07 1266 aa4.86□□□□□ -1.63
PTPN13-202ENST00000411767 EPM2AIP1Q7L775 607 aaPredicted RBP4.86□□□□□ -1.63
PTPN13-202ENST00000411767 PARP9Q8IXQ6 854 aa4.86□□□□□ -1.63
PTPN13-202ENST00000411767 RUNDC1Q96C34 613 aa4.86□□□□□ -1.63
PTPN13-202ENST00000411767 TSEN34Q9BSV6 310 aaKnown RBP4.86□□□□□ -1.63
PTPN13-202ENST00000411767 MED10Q9BTT4 135 aa4.86□□□□□ -1.63
PTPN13-202ENST00000411767 MOV10L1Q9BXT6 1211 aaKnown RBP4.86□□□□□ -1.63
PTPN13-202ENST00000411767 CAPS2Q9BXY5 557 aa4.86□□□□□ -1.63
PTPN13-202ENST00000411767 PHACTR1Q9C0D0 580 aa4.86□□□□□ -1.63
PTPN13-202ENST00000411767 CCSER2Q9H7U1 834 aa4.86□□□□□ -1.63
PTPN13-202ENST00000411767 SMYD2Q9NRG4 433 aa4.86□□□□□ -1.63
PTPN13-202ENST00000411767 VPS4AQ9UN37 437 aa4.86□□□□□ -1.63
PTPN13-202ENST00000411767 PCDHGA6Q9Y5G7 932 aa4.86□□□□□ -1.63
PTPN13-202ENST00000411767 DGKBQ9Y6T7 804 aa4.86□□□□□ -1.63
PTPN13-202ENST00000411767 MDFIC2A0A1B0GVS7 189 aa4.85□□□□□ -1.63
PTPN13-202ENST00000411767 SPDYE5A6NIY4 337 aa4.85□□□□□ -1.63
PTPN13-202ENST00000411767 HSBP1L1C9JCN9 74 aa4.85□□□□□ -1.63
PTPN13-202ENST00000411767 TNFRSF21O75509 655 aa4.85□□□□□ -1.63
PTPN13-202ENST00000411767 OR7A10O76100 309 aa4.85□□□□□ -1.63
PTPN13-202ENST00000411767 PGAM1P18669 254 aa4.85□□□□□ -1.63
PTPN13-202ENST00000411767 RPL13AP40429 203 aaKnown RBP4.85□□□□□ -1.63
PTPN13-202ENST00000411767 PDX1P52945 283 aa4.85□□□□□ -1.63
PTPN13-202ENST00000411767 KRT24Q2M2I5 525 aa4.85□□□□□ -1.63
PTPN13-202ENST00000411767 SPDYE7PQ495Y7 208 aa4.85□□□□□ -1.63
PTPN13-202ENST00000411767 PTPN20Q4JDL3 420 aa4.85□□□□□ -1.63
PTPN13-202ENST00000411767 STK32CQ86UX6 486 aa4.85□□□□□ -1.63
PTPN13-202ENST00000411767 RYBPQ8N488 228 aaPredicted RBP4.85□□□□□ -1.63
PTPN13-202ENST00000411767 DCLK2Q8N568 766 aa4.85□□□□□ -1.63
PTPN13-202ENST00000411767 IQUBQ8NA54 791 aa4.85□□□□□ -1.63
PTPN13-202ENST00000411767 KCNK16Q96T55 309 aa4.85□□□□□ -1.63
PTPN13-202ENST00000411767 JPH2Q9BR39 696 aaPredicted RBP4.85□□□□□ -1.63
PTPN13-202ENST00000411767 ACAD9Q9H845 621 aa4.85□□□□□ -1.63
PTPN13-202ENST00000411767 MYO1AQ9UBC5 1043 aa4.85□□□□□ -1.63
PTPN13-202ENST00000411767 HDAC6Q9UBN7 1215 aa4.85□□□□□ -1.63
PTPN13-202ENST00000411767 SERTAD1Q9UHV2 236 aa4.85□□□□□ -1.63
PTPN13-202ENST00000411767 BAZ1BQ9UIG0 1483 aaKnown RBP4.85□□□□□ -1.63
PTPN13-202ENST00000411767 WIZO95785 1651 aa4.85□□□□□ -1.63
PTPN13-202ENST00000411767 A0A0G2JMP0 313 aa4.85□□□□□ -1.63
PTPN13-202ENST00000411767 A6NJR5 290 aa4.85□□□□□ -1.63
PTPN13-202ENST00000411767 ARHGEF33A8MVX0 844 aa4.85□□□□□ -1.63
PTPN13-202ENST00000411767 WFS1O76024 890 aa4.85□□□□□ -1.63
PTPN13-202ENST00000411767 ATXN8OSP0DMR3 200 aa4.85□□□□□ -1.63
PTPN13-202ENST00000411767 ESRRAP11474 423 aaPredicted RBP4.85□□□□□ -1.63
PTPN13-202ENST00000411767 LMOD1P29536 600 aaPredicted RBP4.85□□□□□ -1.63
PTPN13-202ENST00000411767 PMLP29590 882 aa4.85□□□□□ -1.63
PTPN13-202ENST00000411767 VCPP55072 806 aaKnown RBP4.85□□□□□ -1.63
PTPN13-202ENST00000411767 PLCL1Q15111 1095 aa4.85□□□□□ -1.63
PTPN13-202ENST00000411767 ADRM1Q16186 407 aa4.85□□□□□ -1.63
PTPN13-202ENST00000411767 TUBA3EQ6PEY2 450 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms