RNA–Protein interactions for RNA: ENST00000410011.5

LIMS2-208, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-208ENST00000410011 ARHGEF26Q96DR7 871 aa18.05■□□□□ 0.48
LIMS2-208ENST00000410011 THAP2Q9H0W7 228 aa18.05■□□□□ 0.48
LIMS2-208ENST00000410011 CENPHQ9H3R5 247 aa18.05■□□□□ 0.48
LIMS2-208ENST00000410011 HERC5Q9UII4 1024 aaKnown RBP18.05■□□□□ 0.48
LIMS2-208ENST00000410011 SYNGAP1Q96PV0 1343 aa18.05■□□□□ 0.48
LIMS2-208ENST00000410011 MAPK13O15264 365 aa18.05■□□□□ 0.48
LIMS2-208ENST00000410011 MTA2O94776 668 aa18.05■□□□□ 0.48
LIMS2-208ENST00000410011 CDR1P51861 262 aa18.05■□□□□ 0.48
LIMS2-208ENST00000410011 RBM5P52756 815 aaKnown RBP eCLIP18.05■□□□□ 0.48
LIMS2-208ENST00000410011 CETN1Q12798 172 aa18.05■□□□□ 0.48
LIMS2-208ENST00000410011 BYSLQ13895 437 aaKnown RBP18.05■□□□□ 0.48
LIMS2-208ENST00000410011 HOOK3Q86VS8 718 aa18.05■□□□□ 0.48
LIMS2-208ENST00000410011 RIT2Q99578 217 aa18.05■□□□□ 0.48
LIMS2-208ENST00000410011 IKZF4Q9H2S9 585 aa18.05■□□□□ 0.48
LIMS2-208ENST00000410011 TMEM206Q9H813 350 aa18.05■□□□□ 0.48
LIMS2-208ENST00000410011 PPANQ9NQ55 473 aaKnown RBP18.05■□□□□ 0.48
LIMS2-208ENST00000410011 NOVA2Q9UNW9 492 aaKnown RBP18.05■□□□□ 0.48
LIMS2-208ENST00000410011 ALG6Q9Y672 507 aa18.05■□□□□ 0.48
LIMS2-208ENST00000410011 CAPN7Q9Y6W3 813 aa18.05■□□□□ 0.48
LIMS2-208ENST00000410011 LOXHD1Q8IVV2 1947 aa18.04■□□□□ 0.48
LIMS2-208ENST00000410011 FOXN3O00409 490 aaPredicted RBP18.04■□□□□ 0.48
LIMS2-208ENST00000410011 PODXLO00592 558 aa18.04■□□□□ 0.48
LIMS2-208ENST00000410011 EXOC3O60645 756 aa18.04■□□□□ 0.48
LIMS2-208ENST00000410011 ABCB4P21439 1286 aa18.04■□□□□ 0.48
LIMS2-208ENST00000410011 CHRNA3P32297 505 aa18.04■□□□□ 0.48
LIMS2-208ENST00000410011 CYP2J2P51589 502 aa18.04■□□□□ 0.48
LIMS2-208ENST00000410011 ACTN3Q08043 901 aaPredicted RBP18.04■□□□□ 0.48
LIMS2-208ENST00000410011 MAPK7Q13164 816 aa18.04■□□□□ 0.48
LIMS2-208ENST00000410011 ODF2Q5BJF6 829 aa18.04■□□□□ 0.48
LIMS2-208ENST00000410011 KIAA1755Q5JYT7 1200 aa18.04■□□□□ 0.48
LIMS2-208ENST00000410011 PGM2Q96G03 612 aa18.04■□□□□ 0.48
LIMS2-208ENST00000410011 PSMD1Q99460 953 aa18.04■□□□□ 0.48
LIMS2-208ENST00000410011 RANBP17Q9H2T7 1088 aaKnown RBP18.04■□□□□ 0.48
LIMS2-208ENST00000410011 PABPC3Q9H361 631 aaKnown RBP18.04■□□□□ 0.48
LIMS2-208ENST00000410011 ACTR5Q9H9F9 607 aaPredicted RBP18.04■□□□□ 0.48
LIMS2-208ENST00000410011 PCYOX1Q9UHG3 505 aa18.04■□□□□ 0.48
LIMS2-208ENST00000410011 CNOT7Q9UIV1 285 aaKnown RBP18.04■□□□□ 0.48
LIMS2-208ENST00000410011 RASAL2Q9UJF2 1139 aa18.04■□□□□ 0.48
LIMS2-208ENST00000410011 COG5Q9UP83 839 aa18.04■□□□□ 0.48
LIMS2-208ENST00000410011 TMX2Q9Y320 296 aa18.04■□□□□ 0.48
LIMS2-208ENST00000410011 MRPL11Q9Y3B7 192 aaKnown RBP18.04■□□□□ 0.48
LIMS2-208ENST00000410011 RBBP6Q7Z6E9 1792 aaKnown RBP18.04■□□□□ 0.48
LIMS2-208ENST00000410011 ZBTB39O15060 712 aa18.04■□□□□ 0.48
LIMS2-208ENST00000410011 CFBP00751 764 aa18.04■□□□□ 0.48
LIMS2-208ENST00000410011 SNRPFP62306 86 aaKnown RBP18.04■□□□□ 0.48
LIMS2-208ENST00000410011 KRT71Q3SY84 523 aa18.04■□□□□ 0.48
LIMS2-208ENST00000410011 PROCA1Q8NCQ7 364 aaPredicted RBP18.04■□□□□ 0.48
LIMS2-208ENST00000410011 P3H4Q92791 437 aa18.04■□□□□ 0.48
LIMS2-208ENST00000410011 VCPKMTQ9H867 229 aa18.04■□□□□ 0.48
LIMS2-208ENST00000410011 ARHGEF10LQ9HCE6 1279 aa18.04■□□□□ 0.48
LIMS2-208ENST00000410011 WRAP73Q9P2S5 460 aaPredicted RBP18.04■□□□□ 0.48
LIMS2-208ENST00000410011 CNOT8Q9UFF9 292 aaKnown RBP18.04■□□□□ 0.48
LIMS2-208ENST00000410011 KIAA0391O15091 583 aaKnown RBP18.03■□□□□ 0.48
LIMS2-208ENST00000410011 TRIM49P0CI25 452 aa18.03■□□□□ 0.48
LIMS2-208ENST00000410011 TRIM49CP0CI26 452 aa18.03■□□□□ 0.48
LIMS2-208ENST00000410011 KRT13P13646 458 aa18.03■□□□□ 0.48
LIMS2-208ENST00000410011 MAGOHP61326 146 aaKnown RBP18.03■□□□□ 0.48
LIMS2-208ENST00000410011 TAX1BP1Q86VP1 789 aa18.03■□□□□ 0.48
LIMS2-208ENST00000410011 UBL4BQ8N7F7 174 aa18.03■□□□□ 0.48
LIMS2-208ENST00000410011 ALG3Q92685 438 aa18.03■□□□□ 0.48
LIMS2-208ENST00000410011 MAGOHBQ96A72 148 aaKnown RBP18.03■□□□□ 0.48
LIMS2-208ENST00000410011 ZNF577Q9BSK1 485 aa18.03■□□□□ 0.48
LIMS2-208ENST00000410011 TEKT3Q9BXF9 490 aa18.03■□□□□ 0.48
LIMS2-208ENST00000410011 FAM129AQ9BZQ8 928 aa18.03■□□□□ 0.48
LIMS2-208ENST00000410011 DPH5Q9H2P9 285 aa18.03■□□□□ 0.48
LIMS2-208ENST00000410011 UNC45AQ9H3U1 944 aa18.03■□□□□ 0.48
LIMS2-208ENST00000410011 TAS2R14Q9NYV8 317 aa18.03■□□□□ 0.48
LIMS2-208ENST00000410011 PARP2Q9UGN5 583 aa18.03■□□□□ 0.48
LIMS2-208ENST00000410011 DDX20Q9UHI6 824 aaKnown RBP18.03■□□□□ 0.48
LIMS2-208ENST00000410011 ZNF646O15015 1829 aaPredicted RBP18.03■□□□□ 0.48
LIMS2-208ENST00000410011 PHF2O75151 1096 aa18.03■□□□□ 0.48
LIMS2-208ENST00000410011 GZMAP12544 262 aa18.03■□□□□ 0.48
LIMS2-208ENST00000410011 CTNNA2P26232 953 aa18.03■□□□□ 0.48
LIMS2-208ENST00000410011 GPC5P78333 572 aa18.03■□□□□ 0.48
LIMS2-208ENST00000410011 RRP1BQ14684 758 aaKnown RBP18.03■□□□□ 0.48
LIMS2-208ENST00000410011 JAMLQ86YT9 394 aa18.03■□□□□ 0.48
LIMS2-208ENST00000410011 CHURC1Q8WUH1 139 aa18.03■□□□□ 0.48
LIMS2-208ENST00000410011 RAPGEF5Q92565 580 aa18.03■□□□□ 0.48
LIMS2-208ENST00000410011 RUNDC3BQ96NL0 473 aa18.03■□□□□ 0.48
LIMS2-208ENST00000410011 TRIM51Q9BSJ1 452 aa18.03■□□□□ 0.48
LIMS2-208ENST00000410011 TMEM109Q9BVC6 243 aa18.03■□□□□ 0.48
LIMS2-208ENST00000410011 EPB41L4BQ9H329 900 aa18.03■□□□□ 0.48
LIMS2-208ENST00000410011 CHMP2AO43633 222 aa18.02■□□□□ 0.48
LIMS2-208ENST00000410011 PTGIRP43119 386 aa18.02■□□□□ 0.48
LIMS2-208ENST00000410011 GTF2A1P52655 376 aaPredicted RBP18.02■□□□□ 0.48
LIMS2-208ENST00000410011 SMTNP53814 917 aa18.02■□□□□ 0.48
LIMS2-208ENST00000410011 FBXW10Q5XX13 1052 aa18.02■□□□□ 0.48
LIMS2-208ENST00000410011 KCNV1Q6PIU1 500 aa18.02■□□□□ 0.48
LIMS2-208ENST00000410011 KSR1Q8IVT5 923 aa18.02■□□□□ 0.48
LIMS2-208ENST00000410011 SYCP3Q8IZU3 236 aa18.02■□□□□ 0.48
LIMS2-208ENST00000410011 DAW1Q8N136 415 aa18.02■□□□□ 0.48
LIMS2-208ENST00000410011 CABS1Q96KC9 395 aa18.02■□□□□ 0.48
LIMS2-208ENST00000410011 GOPCQ9HD26 462 aa18.02■□□□□ 0.48
LIMS2-208ENST00000410011 BCCIPQ9P287 314 aaKnown RBP eCLIP18.02■□□□□ 0.48
LIMS2-208ENST00000410011 LARSQ9P2J5 1176 aaKnown RBP18.02■□□□□ 0.48
LIMS2-208ENST00000410011 ATP8A1Q9Y2Q0 1164 aa18.02■□□□□ 0.48
LIMS2-208ENST00000410011 ZNF536O15090 1300 aa18.02■□□□□ 0.47
LIMS2-208ENST00000410011 ARHGEF35A5YM69 484 aa18.01■□□□□ 0.47
LIMS2-208ENST00000410011 CCDC169A6NNP5 214 aa18.01■□□□□ 0.47
LIMS2-208ENST00000410011 UBAP1LF5GYI3 381 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms