RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 CCDC149Q6ZUS6 474 aa5.95□□□□□ -1.46
HMGB3P18-201ENST00000406327 SLC41A1Q8IVJ1 513 aa5.95□□□□□ -1.46
HMGB3P18-201ENST00000406327 DTX3Q8N9I9 347 aa5.95□□□□□ -1.46
HMGB3P18-201ENST00000406327 AMNQ9BXJ7 453 aa5.95□□□□□ -1.46
HMGB3P18-201ENST00000406327 ARHGAP20Q9P2F6 1191 aa5.95□□□□□ -1.46
HMGB3P18-201ENST00000406327 FBXO10Q9UK96 956 aa5.95□□□□□ -1.46
HMGB3P18-201ENST00000406327 APAF1O14727 1248 aa5.94□□□□□ -1.46
HMGB3P18-201ENST00000406327 PMM2O15305 246 aa5.94□□□□□ -1.46
HMGB3P18-201ENST00000406327 SLC16A6O15403 523 aa5.94□□□□□ -1.46
HMGB3P18-201ENST00000406327 TUSC2O75896 110 aa5.94□□□□□ -1.46
HMGB3P18-201ENST00000406327 CYP2C8P10632 490 aa5.94□□□□□ -1.46
HMGB3P18-201ENST00000406327 SDHBP21912 280 aa5.94□□□□□ -1.46
HMGB3P18-201ENST00000406327 AK2P54819 239 aa5.94□□□□□ -1.46
HMGB3P18-201ENST00000406327 ZNF280AP59817 542 aaPredicted RBP5.94□□□□□ -1.46
HMGB3P18-201ENST00000406327 CACNB2Q08289 660 aaPredicted RBP5.94□□□□□ -1.46
HMGB3P18-201ENST00000406327 STILQ15468 1287 aa5.94□□□□□ -1.46
HMGB3P18-201ENST00000406327 CYB5RLQ6IPT4 315 aa5.94□□□□□ -1.46
HMGB3P18-201ENST00000406327 TMC6Q7Z403 805 aa5.94□□□□□ -1.46
HMGB3P18-201ENST00000406327 PROSER1Q86XN7 944 aa5.94□□□□□ -1.46
HMGB3P18-201ENST00000406327 LYSMD2Q8IV50 215 aa5.94□□□□□ -1.46
HMGB3P18-201ENST00000406327 OR5AN1Q8NGI8 311 aa5.94□□□□□ -1.46
HMGB3P18-201ENST00000406327 GJA10Q969M2 543 aa5.94□□□□□ -1.46
HMGB3P18-201ENST00000406327 RBM12Q9NTZ6 932 aaKnown RBP5.94□□□□□ -1.46
HMGB3P18-201ENST00000406327 KLHL11Q9NVR0 708 aa5.94□□□□□ -1.46
HMGB3P18-201ENST00000406327 SERPINB13Q9UIV8 391 aa5.94□□□□□ -1.46
HMGB3P18-201ENST00000406327 CCDC154A6NI56 674 aa5.93□□□□□ -1.46
HMGB3P18-201ENST00000406327 GOLIM4O00461 696 aa5.93□□□□□ -1.46
HMGB3P18-201ENST00000406327 BIN1O00499 593 aa5.93□□□□□ -1.46
HMGB3P18-201ENST00000406327 HTRA2O43464 458 aaPredicted RBP5.93□□□□□ -1.46
HMGB3P18-201ENST00000406327 B3GALT2O43825 422 aa5.93□□□□□ -1.46
HMGB3P18-201ENST00000406327 CREB3O43889 395 aa5.93□□□□□ -1.46
HMGB3P18-201ENST00000406327 UBXN7O94888 489 aa5.93□□□□□ -1.46
HMGB3P18-201ENST00000406327 CHGBP05060 677 aa5.93□□□□□ -1.46
HMGB3P18-201ENST00000406327 PFKLP17858 780 aa5.93□□□□□ -1.46
HMGB3P18-201ENST00000406327 MCAMP43121 646 aa5.93□□□□□ -1.46
HMGB3P18-201ENST00000406327 MGAT2Q10469 447 aa5.93□□□□□ -1.46
HMGB3P18-201ENST00000406327 GALEQ14376 348 aa5.93□□□□□ -1.46
HMGB3P18-201ENST00000406327 ANO6Q4KMQ2 910 aa5.93□□□□□ -1.46
HMGB3P18-201ENST00000406327 LRSAM1Q6UWE0 723 aa5.93□□□□□ -1.46
HMGB3P18-201ENST00000406327 TMC5Q6UXY8 1006 aa5.93□□□□□ -1.46
HMGB3P18-201ENST00000406327 OVCH2Q7RTZ1 564 aa5.93□□□□□ -1.46
HMGB3P18-201ENST00000406327 DAAM2Q86T65 1068 aa5.93□□□□□ -1.46
HMGB3P18-201ENST00000406327 ATG4DQ86TL0 474 aaPredicted RBP5.93□□□□□ -1.46
HMGB3P18-201ENST00000406327 TTC7BQ86TV6 843 aa5.93□□□□□ -1.46
HMGB3P18-201ENST00000406327 SPICE1Q8N0Z3 855 aa5.93□□□□□ -1.46
HMGB3P18-201ENST00000406327 GLB1L3Q8NCI6 653 aaPredicted RBP5.93□□□□□ -1.46
HMGB3P18-201ENST00000406327 ACRBPQ8NEB7 543 aa5.93□□□□□ -1.46
HMGB3P18-201ENST00000406327 NRG4Q8WWG1 115 aa5.93□□□□□ -1.46
HMGB3P18-201ENST00000406327 CLIC6Q96NY7 704 aa5.93□□□□□ -1.46
HMGB3P18-201ENST00000406327 NLRC4Q9NPP4 1024 aa5.93□□□□□ -1.46
HMGB3P18-201ENST00000406327 POLR3BQ9NW08 1133 aaPredicted RBP5.93□□□□□ -1.46
HMGB3P18-201ENST00000406327 PUF60Q9UHX1 559 aaKnown RBP5.93□□□□□ -1.46
HMGB3P18-201ENST00000406327 EVLQ9UI08 416 aaPredicted RBP5.93□□□□□ -1.46
HMGB3P18-201ENST00000406327 CAPN8A6NHC0 703 aa5.92□□□□□ -1.46
HMGB3P18-201ENST00000406327 MGEA5O60502 916 aa5.92□□□□□ -1.46
HMGB3P18-201ENST00000406327 PHF2O75151 1096 aa5.92□□□□□ -1.46
HMGB3P18-201ENST00000406327 SEC24DO94855 1032 aaPredicted RBP5.92□□□□□ -1.46
HMGB3P18-201ENST00000406327 FSBPO95073 299 aa5.92□□□□□ -1.46
HMGB3P18-201ENST00000406327 GLI1P08151 1106 aa5.92□□□□□ -1.46
HMGB3P18-201ENST00000406327 HTR1BP28222 390 aa5.92□□□□□ -1.46
HMGB3P18-201ENST00000406327 CCT2P78371 535 aaKnown RBP5.92□□□□□ -1.46
HMGB3P18-201ENST00000406327 ZNF200P98182 395 aaPredicted RBP5.92□□□□□ -1.46
HMGB3P18-201ENST00000406327 IFIT5Q13325 482 aaKnown RBP5.92□□□□□ -1.46
HMGB3P18-201ENST00000406327 KIAA0753Q2KHM9 967 aa5.92□□□□□ -1.46
HMGB3P18-201ENST00000406327 KANK2Q63ZY3 851 aa5.92□□□□□ -1.46
HMGB3P18-201ENST00000406327 GRAMD4Q6IC98 578 aa5.92□□□□□ -1.46
HMGB3P18-201ENST00000406327 OGFOD2Q6N063 350 aa5.92□□□□□ -1.46
HMGB3P18-201ENST00000406327 LIPIQ6XZB0 460 aa5.92□□□□□ -1.46
HMGB3P18-201ENST00000406327 MORC1Q86VD1 984 aa5.92□□□□□ -1.46
HMGB3P18-201ENST00000406327 ENAHQ8N8S7 591 aaPredicted RBP5.92□□□□□ -1.46
HMGB3P18-201ENST00000406327 FAM156AQ8NDB6 213 aa5.92□□□□□ -1.46
HMGB3P18-201ENST00000406327 MTFMTQ96DP5 389 aaKnown RBP5.92□□□□□ -1.46
HMGB3P18-201ENST00000406327 IL17RAQ96F46 866 aa5.92□□□□□ -1.46
HMGB3P18-201ENST00000406327 DYDC2Q96IM9 177 aa5.92□□□□□ -1.46
HMGB3P18-201ENST00000406327 CDK5RAP3Q96JB5 506 aa5.92□□□□□ -1.46
HMGB3P18-201ENST00000406327 MYD88Q99836 296 aa5.92□□□□□ -1.46
HMGB3P18-201ENST00000406327 C7orf25Q9BPX7 421 aa5.92□□□□□ -1.46
HMGB3P18-201ENST00000406327 HAPLN2Q9GZV7 340 aa5.92□□□□□ -1.46
HMGB3P18-201ENST00000406327 PRDM12Q9H4Q4 367 aa5.92□□□□□ -1.46
HMGB3P18-201ENST00000406327 INTUQ9ULD6 942 aa5.92□□□□□ -1.46
HMGB3P18-201ENST00000406327 PHTF1Q9UMS5 762 aa5.92□□□□□ -1.46
HMGB3P18-201ENST00000406327 POLHQ9Y253 713 aa5.92□□□□□ -1.46
HMGB3P18-201ENST00000406327 STXBP5LQ9Y2K9 1186 aa5.92□□□□□ -1.46
HMGB3P18-201ENST00000406327 IPPQ9Y573 584 aa5.92□□□□□ -1.46
HMGB3P18-201ENST00000406327 HCFC2Q9Y5Z7 792 aa5.92□□□□□ -1.46
HMGB3P18-201ENST00000406327 ABCC9O60706 1549 aa5.92□□□□□ -1.46
HMGB3P18-201ENST00000406327 SGTAO43765 313 aa5.91□□□□□ -1.46
HMGB3P18-201ENST00000406327 ENDOD1O94919 500 aa5.91□□□□□ -1.46
HMGB3P18-201ENST00000406327 ARIH2O95376 493 aa5.91□□□□□ -1.46
HMGB3P18-201ENST00000406327 CELA3BP08861 270 aa5.91□□□□□ -1.46
HMGB3P18-201ENST00000406327 IL13RA1P78552 427 aa5.91□□□□□ -1.46
HMGB3P18-201ENST00000406327 GPSM2P81274 684 aa5.91□□□□□ -1.46
HMGB3P18-201ENST00000406327 WDR72Q3MJ13 1102 aa5.91□□□□□ -1.46
HMGB3P18-201ENST00000406327 CCDC157Q569K6 752 aa5.91□□□□□ -1.46
HMGB3P18-201ENST00000406327 TOGARAM2Q6ZUX3 1019 aa5.91□□□□□ -1.46
HMGB3P18-201ENST00000406327 GAREM2Q75VX8 874 aa5.91□□□□□ -1.46
HMGB3P18-201ENST00000406327 FAM186BQ8IYM0 893 aa5.91□□□□□ -1.46
HMGB3P18-201ENST00000406327 KIAA0319LQ8IZA0 1049 aa5.91□□□□□ -1.46
HMGB3P18-201ENST00000406327 RGMAQ96B86 450 aa5.91□□□□□ -1.46
HMGB3P18-201ENST00000406327 FAM167AQ96KS9 214 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms