RNA–Protein interactions for RNA: ENST00000403904.5

CSNK1E-204, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CSNK1E, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-204ENST00000403904 BIN1O00499 593 aa36.7■■■■□ 3.46
CSNK1E-204ENST00000403904 CDCA2Q69YH5 1023 aaPredicted RBP36.7■■■■□ 3.46
CSNK1E-204ENST00000403904 TMEM161BQ8NDZ6 487 aa36.7■■■■□ 3.46
CSNK1E-204ENST00000403904 GLIS3Q8NEA6 775 aa36.7■■■■□ 3.46
CSNK1E-204ENST00000403904 ARHGAP28Q9P2N2 729 aa36.7■■■■□ 3.46
CSNK1E-204ENST00000403904 KIAA0355O15063 1070 aa36.69■■■■□ 3.46
CSNK1E-204ENST00000403904 CASP5P51878 434 aa36.69■■■■□ 3.46
CSNK1E-204ENST00000403904 STK4Q13043 487 aa36.69■■■■□ 3.46
CSNK1E-204ENST00000403904 ZNF720Q7Z2F6 126 aa36.69■■■■□ 3.46
CSNK1E-204ENST00000403904 HAUS6Q7Z4H7 955 aa36.69■■■■□ 3.46
CSNK1E-204ENST00000403904 ZBTB8OSQ8IWT0 167 aa36.69■■■■□ 3.46
CSNK1E-204ENST00000403904 NFKBIZQ9BYH8 718 aa36.69■■■■□ 3.46
CSNK1E-204ENST00000403904 OSBPL7Q9BZF2 842 aa36.69■■■■□ 3.46
CSNK1E-204ENST00000403904 EVI5O60447 810 aa36.68■■■■□ 3.46
CSNK1E-204ENST00000403904 MAPTP10636 758 aaKnown RBP36.68■■■■□ 3.46
CSNK1E-204ENST00000403904 DARSP14868 501 aaKnown RBP36.68■■■■□ 3.46
CSNK1E-204ENST00000403904 EIF4BP23588 611 aaKnown RBP36.68■■■■□ 3.46
CSNK1E-204ENST00000403904 CCL23P55773 120 aa36.68■■■■□ 3.46
CSNK1E-204ENST00000403904 ZC2HC1CQ53FD0 456 aaPredicted RBP36.68■■■■□ 3.46
CSNK1E-204ENST00000403904 RBM43Q6ZSC3 357 aaKnown RBP36.68■■■■□ 3.46
CSNK1E-204ENST00000403904 DPF3Q92784 378 aa36.68■■■■□ 3.46
CSNK1E-204ENST00000403904 WNT8AQ9H1J5 351 aa36.68■■■■□ 3.46
CSNK1E-204ENST00000403904 C2orf40Q9H1Z8 148 aa36.68■■■■□ 3.46
CSNK1E-204ENST00000403904 PCDH10Q9P2E7 1040 aa36.68■■■■□ 3.46
CSNK1E-204ENST00000403904 GCNT3O95395 438 aa36.67■■■■□ 3.46
CSNK1E-204ENST00000403904 IQCF3P0C7M6 154 aa36.67■■■■□ 3.46
CSNK1E-204ENST00000403904 ITGB8P26012 769 aa36.67■■■■□ 3.46
CSNK1E-204ENST00000403904 PSMD2Q13200 908 aa36.67■■■■□ 3.46
CSNK1E-204ENST00000403904 MBTPS1Q14703 1052 aa36.67■■■■□ 3.46
CSNK1E-204ENST00000403904 IFNLR1Q8IU57 520 aaPredicted RBP36.67■■■■□ 3.46
CSNK1E-204ENST00000403904 DENND3A2RUS2 1198 aa36.66■■■■□ 3.46
CSNK1E-204ENST00000403904 INO80B-WBP1J3KQ70 363 aa36.66■■■■□ 3.46
CSNK1E-204ENST00000403904 MYBP10242 640 aa36.66■■■■□ 3.46
CSNK1E-204ENST00000403904 SRGAP1Q7Z6B7 1085 aa36.66■■■■□ 3.46
CSNK1E-204ENST00000403904 KIAA0895Q8NCT3 520 aa36.66■■■■□ 3.46
CSNK1E-204ENST00000403904 SCLYQ96I15 445 aa36.66■■■■□ 3.46
CSNK1E-204ENST00000403904 INO80BQ9C086 356 aaPredicted RBP36.66■■■■□ 3.46
CSNK1E-204ENST00000403904 TANC1Q9C0D5 1861 aa36.66■■■■□ 3.46
CSNK1E-204ENST00000403904 RAG1P15918 1043 aa36.66■■■■□ 3.46
CSNK1E-204ENST00000403904 EFNA5P52803 228 aa36.66■■■■□ 3.46
CSNK1E-204ENST00000403904 MBTD1Q05BQ5 628 aa36.66■■■■□ 3.46
CSNK1E-204ENST00000403904 FBXO47Q5MNV8 452 aa36.66■■■■□ 3.46
CSNK1E-204ENST00000403904 SLC17A8Q8NDX2 589 aa36.66■■■■□ 3.46
CSNK1E-204ENST00000403904 GDAQ9Y2T3 454 aa36.66■■■■□ 3.46
CSNK1E-204ENST00000403904 NOC2LQ9Y3T9 749 aaKnown RBP36.66■■■■□ 3.46
CSNK1E-204ENST00000403904 K7ERI5 159 aa36.65■■■■□ 3.46
CSNK1E-204ENST00000403904 TIMP1P01033 207 aa36.65■■■■□ 3.46
CSNK1E-204ENST00000403904 GHRP10912 638 aa36.65■■■■□ 3.46
CSNK1E-204ENST00000403904 FGFR4P22455 802 aa36.65■■■■□ 3.46
CSNK1E-204ENST00000403904 ST6GALNAC4Q9H4F1 302 aa36.65■■■■□ 3.46
CSNK1E-204ENST00000403904 PRKAG2Q9UGJ0 569 aa36.65■■■■□ 3.46
CSNK1E-204ENST00000403904 SCN5AQ14524 2016 aa36.64■■■■□ 3.46
CSNK1E-204ENST00000403904 H0YCG3 227 aa36.64■■■■□ 3.46
CSNK1E-204ENST00000403904 TAS1R3Q7RTX0 852 aa36.64■■■■□ 3.46
CSNK1E-204ENST00000403904 SMYD4Q8IYR2 804 aaPredicted RBP36.64■■■■□ 3.46
CSNK1E-204ENST00000403904 CCDC113Q9H0I3 377 aa36.64■■■■□ 3.46
CSNK1E-204ENST00000403904 GTF2BQ00403 316 aa36.63■■■■□ 3.45
CSNK1E-204ENST00000403904 MORC3Q14149 939 aa36.63■■■■□ 3.45
CSNK1E-204ENST00000403904 LPIN1Q14693 890 aa36.63■■■■□ 3.45
CSNK1E-204ENST00000403904 ZNF658Q5TYW1 1059 aaPredicted RBP36.63■■■■□ 3.45
CSNK1E-204ENST00000403904 STRA6Q9BX79 667 aa36.63■■■■□ 3.45
CSNK1E-204ENST00000403904 TMEM134Q9H6X4 195 aa36.63■■■■□ 3.45
CSNK1E-204ENST00000403904 PPP1R37O75864 691 aa36.62■■■■□ 3.45
CSNK1E-204ENST00000403904 BMP6P22004 513 aa36.62■■■■□ 3.45
CSNK1E-204ENST00000403904 GPNMBQ14956 572 aa36.62■■■■□ 3.45
CSNK1E-204ENST00000403904 MAPK6Q16659 721 aa36.62■■■■□ 3.45
CSNK1E-204ENST00000403904 AGO3Q9H9G7 860 aaKnown RBP36.62■■■■□ 3.45
CSNK1E-204ENST00000403904 PCDHB13Q9Y5F0 798 aa36.62■■■■□ 3.45
CSNK1E-204ENST00000403904 PHLPP2Q6ZVD8 1323 aa36.62■■■■□ 3.45
CSNK1E-204ENST00000403904 RPS6KA5O75582 802 aa36.61■■■■□ 3.45
CSNK1E-204ENST00000403904 PRPF6O94906 941 aaKnown RBP36.61■■■■□ 3.45
CSNK1E-204ENST00000403904 EPM2AIP1Q7L775 607 aaPredicted RBP36.61■■■■□ 3.45
CSNK1E-204ENST00000403904 FAM228AQ86W67 206 aa36.61■■■■□ 3.45
CSNK1E-204ENST00000403904 FZD8Q9H461 694 aa36.61■■■■□ 3.45
CSNK1E-204ENST00000403904 TBX20Q9UMR3 447 aa36.61■■■■□ 3.45
CSNK1E-204ENST00000403904 USP20Q9Y2K6 914 aa36.61■■■■□ 3.45
CSNK1E-204ENST00000403904 NBNO60934 754 aa36.61■■■■□ 3.45
CSNK1E-204ENST00000403904 PRKCBP05771 671 aa36.61■■■■□ 3.45
CSNK1E-204ENST00000403904 KCNA1Q09470 495 aa36.61■■■■□ 3.45
CSNK1E-204ENST00000403904 MAPK8IP1Q9UQF2 711 aa36.61■■■■□ 3.45
CSNK1E-204ENST00000403904 EDN1P05305 212 aa36.6■■■■□ 3.45
CSNK1E-204ENST00000403904 SFPQP23246 707 aaKnown RBP eCLIP36.6■■■■□ 3.45
CSNK1E-204ENST00000403904 TSHZ1Q6ZSZ6 1077 aa36.6■■■■□ 3.45
CSNK1E-204ENST00000403904 CATSPER4Q7RTX7 472 aa36.6■■■■□ 3.45
CSNK1E-204ENST00000403904 TRIML1Q8N9V2 468 aa36.6■■■■□ 3.45
CSNK1E-204ENST00000403904 SCFD1Q8WVM8 642 aa36.6■■■■□ 3.45
CSNK1E-204ENST00000403904 SQORQ9Y6N5 450 aa36.6■■■■□ 3.45
CSNK1E-204ENST00000403904 SYN1P17600 705 aa36.59■■■■□ 3.45
CSNK1E-204ENST00000403904 CD52P31358 61 aa36.59■■■■□ 3.45
CSNK1E-204ENST00000403904 STRN3Q13033 797 aa36.59■■■■□ 3.45
CSNK1E-204ENST00000403904 ALCAMQ13740 583 aa36.59■■■■□ 3.45
CSNK1E-204ENST00000403904 STXBP4Q6ZWJ1 553 aa36.59■■■■□ 3.45
CSNK1E-204ENST00000403904 KCNN1Q92952 543 aa36.59■■■■□ 3.45
CSNK1E-204ENST00000403904 PRMT7Q9NVM4 692 aaPredicted RBP36.59■■■■□ 3.45
CSNK1E-204ENST00000403904 ST3GAL5Q9UNP4 418 aa36.59■■■■□ 3.45
CSNK1E-204ENST00000403904 SCP2P22307 547 aa36.58■■■■□ 3.45
CSNK1E-204ENST00000403904 NFX1Q12986 1120 aaKnown RBP36.58■■■■□ 3.45
CSNK1E-204ENST00000403904 AMHR2Q16671 573 aa36.58■■■■□ 3.45
CSNK1E-204ENST00000403904 USP38Q8NB14 1042 aa36.58■■■■□ 3.45
CSNK1E-204ENST00000403904 ZMYND8Q9ULU4 1186 aaPredicted RBP36.58■■■■□ 3.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms