RNA–Protein interactions for RNA: ENST00000403542.6

RBM39-206, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,883 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-206ENST00000403542 PMS2P54278 862 aa12.95□□□□□ -0.34
RBM39-206ENST00000403542 AP3B2Q13367 1082 aa12.95□□□□□ -0.34
RBM39-206ENST00000403542 BIRC3Q13489 604 aa12.95□□□□□ -0.34
RBM39-206ENST00000403542 BYSLQ13895 437 aaKnown RBP12.95□□□□□ -0.34
RBM39-206ENST00000403542 EPC2Q52LR7 807 aa12.95□□□□□ -0.34
RBM39-206ENST00000403542 FAM133BQ5BKY9 247 aaKnown RBP12.95□□□□□ -0.34
RBM39-206ENST00000403542 GKAP1Q5VSY0 366 aaPredicted RBP12.95□□□□□ -0.34
RBM39-206ENST00000403542 DAB2IPQ5VWQ8 1189 aa12.95□□□□□ -0.34
RBM39-206ENST00000403542 DENND2CQ68D51 928 aa12.95□□□□□ -0.34
RBM39-206ENST00000403542 TTC27Q6P3X3 843 aa12.95□□□□□ -0.34
RBM39-206ENST00000403542 C1orf186Q6ZWK4 172 aa12.95□□□□□ -0.34
RBM39-206ENST00000403542 OTOP1Q7RTM1 612 aa12.95□□□□□ -0.34
RBM39-206ENST00000403542 BORCS6Q96GS4 357 aa12.95□□□□□ -0.34
RBM39-206ENST00000403542 NAP1L4Q99733 375 aaKnown RBP12.95□□□□□ -0.34
RBM39-206ENST00000403542 PRMT1Q99873 361 aaKnown RBP12.95□□□□□ -0.34
RBM39-206ENST00000403542 CBWD1Q9BRT8 395 aa12.95□□□□□ -0.34
RBM39-206ENST00000403542 PRR12Q9ULL5 1215 aa12.95□□□□□ -0.34
RBM39-206ENST00000403542 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.95□□□□□ -0.34
RBM39-206ENST00000403542 K7ENM7 598 aa12.94□□□□□ -0.34
RBM39-206ENST00000403542 ECM2O94769 699 aaPredicted RBP12.94□□□□□ -0.34
RBM39-206ENST00000403542 RPL21P46778 160 aaKnown RBP12.94□□□□□ -0.34
RBM39-206ENST00000403542 POU5F1Q01860 360 aaKnown RBP12.94□□□□□ -0.34
RBM39-206ENST00000403542 MTMR3Q13615 1198 aa12.94□□□□□ -0.34
RBM39-206ENST00000403542 Q4G0T1 1027 aa12.94□□□□□ -0.34
RBM39-206ENST00000403542 CCDC105Q8IYK2 499 aa12.94□□□□□ -0.34
RBM39-206ENST00000403542 RPUSD2Q8IZ73 545 aaKnown RBP12.94□□□□□ -0.34
RBM39-206ENST00000403542 CERKQ8TCT0 537 aa12.94□□□□□ -0.34
RBM39-206ENST00000403542 TBC1D31Q96DN5 1066 aa12.94□□□□□ -0.34
RBM39-206ENST00000403542 ELAC2Q9BQ52 826 aaKnown RBP12.94□□□□□ -0.34
RBM39-206ENST00000403542 FAM114A2Q9NRY5 505 aa12.94□□□□□ -0.34
RBM39-206ENST00000403542 PI4KBQ9UBF8 816 aa12.94□□□□□ -0.34
RBM39-206ENST00000403542 SGPL1O95470 568 aa12.94□□□□□ -0.34
RBM39-206ENST00000403542 ACSL3O95573 720 aa12.94□□□□□ -0.34
RBM39-206ENST00000403542 COMTP21964 271 aa12.94□□□□□ -0.34
RBM39-206ENST00000403542 PTENP60484 403 aa12.94□□□□□ -0.34
RBM39-206ENST00000403542 VPS72Q15906 364 aa12.94□□□□□ -0.34
RBM39-206ENST00000403542 C6orf89Q6UWU4 347 aa12.94□□□□□ -0.34
RBM39-206ENST00000403542 ZNF720Q7Z2F6 126 aa12.94□□□□□ -0.34
RBM39-206ENST00000403542 PPM1KQ8N3J5 372 aa12.94□□□□□ -0.34
RBM39-206ENST00000403542 FAM20AQ96MK3 541 aa12.94□□□□□ -0.34
RBM39-206ENST00000403542 PWWP2AQ96N64 755 aa12.94□□□□□ -0.34
RBM39-206ENST00000403542 HSD17B14Q9BPX1 270 aa12.94□□□□□ -0.34
RBM39-206ENST00000403542 EPB41L4BQ9H329 900 aa12.94□□□□□ -0.34
RBM39-206ENST00000403542 FBXO28Q9NVF7 368 aa12.94□□□□□ -0.34
RBM39-206ENST00000403542 NENFQ9UMX5 172 aa12.94□□□□□ -0.34
RBM39-206ENST00000403542 CLRN2A0PK11 232 aa12.93□□□□□ -0.34
RBM39-206ENST00000403542 SLC16A3O15427 465 aaKnown RBP12.93□□□□□ -0.34
RBM39-206ENST00000403542 RGS16O15492 202 aaPredicted RBP12.93□□□□□ -0.34
RBM39-206ENST00000403542 HIP1RO75146 1068 aa12.93□□□□□ -0.34
RBM39-206ENST00000403542 TMEM253P0C7T8 217 aa12.93□□□□□ -0.34
RBM39-206ENST00000403542 CREB1P16220 341 aa12.93□□□□□ -0.34
RBM39-206ENST00000403542 SSTR3P32745 418 aaPredicted RBP12.93□□□□□ -0.34
RBM39-206ENST00000403542 PPATQ06203 517 aa12.93□□□□□ -0.34
RBM39-206ENST00000403542 PPP3CAQ08209 521 aa12.93□□□□□ -0.34
RBM39-206ENST00000403542 ANKRD20A8PQ5CZ79 823 aa12.93□□□□□ -0.34
RBM39-206ENST00000403542 KIRREL3Q8IZU9 778 aa12.93□□□□□ -0.34
RBM39-206ENST00000403542 NEK9Q8TD19 979 aa12.93□□□□□ -0.34
RBM39-206ENST00000403542 DCAF4Q8WV16 495 aa12.93□□□□□ -0.34
RBM39-206ENST00000403542 CCDC17Q96LX7 622 aa12.93□□□□□ -0.34
RBM39-206ENST00000403542 MBOAT7Q96N66 472 aa12.93□□□□□ -0.34
RBM39-206ENST00000403542 LXNQ9BS40 222 aa12.93□□□□□ -0.34
RBM39-206ENST00000403542 RAB17Q9H0T7 212 aa12.93□□□□□ -0.34
RBM39-206ENST00000403542 IGLV3-22A0A075B6J6 115 aa12.93□□□□□ -0.34
RBM39-206ENST00000403542 TCP10L2B9ZVM9 353 aa12.93□□□□□ -0.34
RBM39-206ENST00000403542 POLRMTO00411 1230 aaKnown RBP12.93□□□□□ -0.34
RBM39-206ENST00000403542 CES2O00748 559 aa12.93□□□□□ -0.34
RBM39-206ENST00000403542 SPOPO43791 374 aa12.93□□□□□ -0.34
RBM39-206ENST00000403542 CLSTN1O94985 981 aa12.93□□□□□ -0.34
RBM39-206ENST00000403542 PYGMP11217 842 aa12.93□□□□□ -0.34
RBM39-206ENST00000403542 SCTRP47872 440 aa12.93□□□□□ -0.34
RBM39-206ENST00000403542 PRELID2Q8N945 189 aa12.93□□□□□ -0.34
RBM39-206ENST00000403542 C1orf54Q8WWF1 131 aa12.93□□□□□ -0.34
RBM39-206ENST00000403542 HVCN1Q96D96 273 aa12.93□□□□□ -0.34
RBM39-206ENST00000403542 XPO6Q96QU8 1125 aaKnown RBP12.93□□□□□ -0.34
RBM39-206ENST00000403542 AGPAT1Q99943 283 aa12.93□□□□□ -0.34
RBM39-206ENST00000403542 ZNF577Q9BSK1 485 aa12.93□□□□□ -0.34
RBM39-206ENST00000403542 UNC45AQ9H3U1 944 aa12.93□□□□□ -0.34
RBM39-206ENST00000403542 GPRC5CQ9NQ84 441 aa12.93□□□□□ -0.34
RBM39-206ENST00000403542 CYP26A1O43174 497 aa12.92□□□□□ -0.34
RBM39-206ENST00000403542 DLATP10515 647 aaKnown RBP12.92□□□□□ -0.34
RBM39-206ENST00000403542 RDXP35241 583 aaKnown RBP12.92□□□□□ -0.34
RBM39-206ENST00000403542 MAP2K2P36507 400 aa12.92□□□□□ -0.34
RBM39-206ENST00000403542 MAP2K1Q02750 393 aaPredicted RBP12.92□□□□□ -0.34
RBM39-206ENST00000403542 BFSP1Q12934 665 aa12.92□□□□□ -0.34
RBM39-206ENST00000403542 MAPK7Q13164 816 aa12.92□□□□□ -0.34
RBM39-206ENST00000403542 LONRF1Q17RB8 773 aa12.92□□□□□ -0.34
RBM39-206ENST00000403542 DUPD1Q68J44 220 aa12.92□□□□□ -0.34
RBM39-206ENST00000403542 LLGL2Q6P1M3 1020 aa12.92□□□□□ -0.34
RBM39-206ENST00000403542 CCDC137Q6PK04 289 aaKnown RBP12.92□□□□□ -0.34
RBM39-206ENST00000403542 ZDHHC24Q6UX98 284 aa12.92□□□□□ -0.34
RBM39-206ENST00000403542 SLC47A2Q86VL8 602 aa12.92□□□□□ -0.34
RBM39-206ENST00000403542 LRRC34Q8IZ02 419 aa12.92□□□□□ -0.34
RBM39-206ENST00000403542 TATDN2Q93075 761 aa12.92□□□□□ -0.34
RBM39-206ENST00000403542 CSRNP1Q96S65 589 aa12.92□□□□□ -0.34
RBM39-206ENST00000403542 DDX23Q9BUQ8 820 aaKnown RBP12.92□□□□□ -0.34
RBM39-206ENST00000403542 KIFC3Q9BVG8 833 aa12.92□□□□□ -0.34
RBM39-206ENST00000403542 GLT8D2Q9H1C3 349 aa12.92□□□□□ -0.34
RBM39-206ENST00000403542 HOMER2Q9NSB8 354 aa12.92□□□□□ -0.34
RBM39-206ENST00000403542 ZDHHC18Q9NUE0 388 aa12.92□□□□□ -0.34
RBM39-206ENST00000403542 ARHGEF35A5YM69 484 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms