RNA–Protein interactions for RNA: ENST00000402326.1

CBX3P9-201, Transcript of chromobox 3 pseudogene 9, humanhuman

BASIC

Gene CBX3P9, Length 552 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P9-201ENST00000402326 DBX2Q6ZNG2 339 aa3.18□□□□□ -1.9
CBX3P9-201ENST00000402326 Q6ZUG5 572 aa3.18□□□□□ -1.9
CBX3P9-201ENST00000402326 EPM2AIP1Q7L775 607 aaPredicted RBP3.18□□□□□ -1.9
CBX3P9-201ENST00000402326 BMP8AQ7Z5Y6 402 aa3.18□□□□□ -1.9
CBX3P9-201ENST00000402326 FAM124AQ86V42 546 aa3.18□□□□□ -1.9
CBX3P9-201ENST00000402326 ZNF761Q86XN6 746 aaPredicted RBP3.18□□□□□ -1.9
CBX3P9-201ENST00000402326 REXO1L1PQ8IX06 675 aa3.18□□□□□ -1.9
CBX3P9-201ENST00000402326 KLHL36Q8N4N3 616 aa3.18□□□□□ -1.9
CBX3P9-201ENST00000402326 PPM1NQ8N819 430 aa3.18□□□□□ -1.9
CBX3P9-201ENST00000402326 TIFAQ96CG3 184 aa3.18□□□□□ -1.9
CBX3P9-201ENST00000402326 CLIP3Q96DZ5 547 aa3.18□□□□□ -1.9
CBX3P9-201ENST00000402326 AJUBAQ96IF1 538 aa3.18□□□□□ -1.9
CBX3P9-201ENST00000402326 RAX2Q96IS3 184 aa3.18□□□□□ -1.9
CBX3P9-201ENST00000402326 LCORQ96JN0 433 aaPredicted RBP3.18□□□□□ -1.9
CBX3P9-201ENST00000402326 HIST1H2AHQ96KK5 128 aa3.18□□□□□ -1.9
CBX3P9-201ENST00000402326 ORAI2Q96SN7 254 aa3.18□□□□□ -1.9
CBX3P9-201ENST00000402326 HIST1H2AJQ99878 128 aa3.18□□□□□ -1.9
CBX3P9-201ENST00000402326 NOL10Q9BSC4 688 aaKnown RBP3.18□□□□□ -1.9
CBX3P9-201ENST00000402326 CARD11Q9BXL7 1154 aa3.18□□□□□ -1.9
CBX3P9-201ENST00000402326 PITHD1Q9GZP4 211 aaPredicted RBP3.18□□□□□ -1.9
CBX3P9-201ENST00000402326 OBP2AQ9NY56 170 aa3.18□□□□□ -1.9
CBX3P9-201ENST00000402326 CDC42EP3Q9UKI2 254 aa3.18□□□□□ -1.9
CBX3P9-201ENST00000402326 TMPRSS11EQ9UL52 423 aa3.18□□□□□ -1.9
CBX3P9-201ENST00000402326 PNMA8BQ9ULN7 279 aaPredicted RBP3.18□□□□□ -1.9
CBX3P9-201ENST00000402326 USP18Q9UMW8 372 aa3.18□□□□□ -1.9
CBX3P9-201ENST00000402326 GIT1Q9Y2X7 761 aa3.18□□□□□ -1.9
CBX3P9-201ENST00000402326 ZDHHC9Q9Y397 364 aa3.18□□□□□ -1.9
CBX3P9-201ENST00000402326 MRFAP1Q9Y605 127 aa3.18□□□□□ -1.9
CBX3P9-201ENST00000402326 GOLGA6CA6NDK9 693 aa3.17□□□□□ -1.9
CBX3P9-201ENST00000402326 GOLGA6BA6NDN3 693 aa3.17□□□□□ -1.9
CBX3P9-201ENST00000402326 MROH6A6NGR9 719 aa3.17□□□□□ -1.9
CBX3P9-201ENST00000402326 CAND2O75155 1236 aa3.17□□□□□ -1.9
CBX3P9-201ENST00000402326 HMGCRP04035 888 aa3.17□□□□□ -1.9
CBX3P9-201ENST00000402326 GOLGA6DP0CG33 693 aa3.17□□□□□ -1.9
CBX3P9-201ENST00000402326 MYBP10242 640 aa3.17□□□□□ -1.9
CBX3P9-201ENST00000402326 MTHFD2P13995 350 aa3.17□□□□□ -1.9
CBX3P9-201ENST00000402326 AGXTP21549 392 aa3.17□□□□□ -1.9
CBX3P9-201ENST00000402326 LPOP22079 712 aaPredicted RBP3.17□□□□□ -1.9
CBX3P9-201ENST00000402326 XPAP23025 273 aaPredicted RBP3.17□□□□□ -1.9
CBX3P9-201ENST00000402326 CYP2C19P33261 490 aa3.17□□□□□ -1.9
CBX3P9-201ENST00000402326 ETV4P43268 484 aa3.17□□□□□ -1.9
CBX3P9-201ENST00000402326 MTNR1BP49286 362 aa3.17□□□□□ -1.9
CBX3P9-201ENST00000402326 GPR15P49685 360 aa3.17□□□□□ -1.9
CBX3P9-201ENST00000402326 MEOX1P50221 254 aa3.17□□□□□ -1.9
CBX3P9-201ENST00000402326 STAT5BP51692 787 aa3.17□□□□□ -1.9
CBX3P9-201ENST00000402326 SESN2P58004 480 aaPredicted RBP3.17□□□□□ -1.9
CBX3P9-201ENST00000402326 ANTXR2P58335 489 aa3.17□□□□□ -1.9
CBX3P9-201ENST00000402326 CCT2P78371 535 aaKnown RBP3.17□□□□□ -1.9
CBX3P9-201ENST00000402326 KRT85P78386 507 aa3.17□□□□□ -1.9
CBX3P9-201ENST00000402326 MRPS9P82933 396 aaKnown RBP3.17□□□□□ -1.9
CBX3P9-201ENST00000402326 TRIM25Q14258 630 aaKnown RBP3.17□□□□□ -1.9
CBX3P9-201ENST00000402326 USP10Q14694 798 aaKnown RBP3.17□□□□□ -1.9
CBX3P9-201ENST00000402326 CPEB4Q17RY0 729 aaKnown RBP eCLIP3.17□□□□□ -1.9
CBX3P9-201ENST00000402326 CCDC178Q5BJE1 867 aa3.17□□□□□ -1.9
CBX3P9-201ENST00000402326 TRIM68Q6AZZ1 485 aa3.17□□□□□ -1.9
CBX3P9-201ENST00000402326 CXorf57Q6NSI4 855 aaKnown RBP3.17□□□□□ -1.9
CBX3P9-201ENST00000402326 KSR2Q6VAB6 950 aa3.17□□□□□ -1.9
CBX3P9-201ENST00000402326 KCNK18Q7Z418 384 aa3.17□□□□□ -1.9
CBX3P9-201ENST00000402326 C1QL4Q86Z23 238 aa3.17□□□□□ -1.9
CBX3P9-201ENST00000402326 RTKN2Q8IZC4 609 aa3.17□□□□□ -1.9
CBX3P9-201ENST00000402326 BCL6BQ8N143 479 aaPredicted RBP3.17□□□□□ -1.9
CBX3P9-201ENST00000402326 CDYL2Q8N8U2 506 aa3.17□□□□□ -1.9
CBX3P9-201ENST00000402326 OR5AN1Q8NGI8 311 aa3.17□□□□□ -1.9
CBX3P9-201ENST00000402326 OR14C36Q8NHC7 312 aa3.17□□□□□ -1.9
CBX3P9-201ENST00000402326 GAB3Q8WWW8 586 aa3.17□□□□□ -1.9
CBX3P9-201ENST00000402326 RELTQ969Z4 430 aa3.17□□□□□ -1.9
CBX3P9-201ENST00000402326 DYDC2Q96IM9 177 aa3.17□□□□□ -1.9
CBX3P9-201ENST00000402326 KATNBL1Q9H079 304 aa3.17□□□□□ -1.9
CBX3P9-201ENST00000402326 SLC12A5Q9H2X9 1139 aa3.17□□□□□ -1.9
CBX3P9-201ENST00000402326 ARNT2Q9HBZ2 717 aa3.17□□□□□ -1.9
CBX3P9-201ENST00000402326 CHST12Q9NRB3 414 aa3.17□□□□□ -1.9
CBX3P9-201ENST00000402326 GOLGA6AQ9NYA3 693 aa3.17□□□□□ -1.9
CBX3P9-201ENST00000402326 DDX20Q9UHI6 824 aaKnown RBP3.17□□□□□ -1.9
CBX3P9-201ENST00000402326 PRSS50Q9UI38 385 aa3.17□□□□□ -1.9
CBX3P9-201ENST00000402326 MAGEL2Q9UJ55 1249 aa3.17□□□□□ -1.9
CBX3P9-201ENST00000402326 TUBD1Q9UJT1 453 aa3.17□□□□□ -1.9
CBX3P9-201ENST00000402326 ADAM29Q9UKF5 820 aa3.17□□□□□ -1.9
CBX3P9-201ENST00000402326 VWA7Q9Y334 891 aa3.17□□□□□ -1.9
CBX3P9-201ENST00000402326 PCDHB6Q9Y5E3 794 aa3.17□□□□□ -1.9
CBX3P9-201ENST00000402326 GPR45Q9Y5Y3 372 aa3.17□□□□□ -1.9
CBX3P9-201ENST00000402326 DAPK3O43293 454 aa3.16□□□□□ -1.9
CBX3P9-201ENST00000402326 AP1G1O43747 822 aa3.16□□□□□ -1.9
CBX3P9-201ENST00000402326 NRP2O60462 931 aa3.16□□□□□ -1.9
CBX3P9-201ENST00000402326 NDUFS2O75306 463 aa3.16□□□□□ -1.9
CBX3P9-201ENST00000402326 KRT18P05783 430 aaKnown RBP3.16□□□□□ -1.9
CBX3P9-201ENST00000402326 ZSCAN22P10073 491 aaPredicted RBP3.16□□□□□ -1.9
CBX3P9-201ENST00000402326 CSF2RBP32927 897 aa3.16□□□□□ -1.9
CBX3P9-201ENST00000402326 FXR1P51114 621 aaKnown RBP eCLIP3.16□□□□□ -1.9
CBX3P9-201ENST00000402326 LGALS4P56470 323 aa3.16□□□□□ -1.9
CBX3P9-201ENST00000402326 NRG3P56975 720 aa3.16□□□□□ -1.9
CBX3P9-201ENST00000402326 GJA9P57773 515 aa3.16□□□□□ -1.9
CBX3P9-201ENST00000402326 RHBDL3P58872 404 aa3.16□□□□□ -1.9
CBX3P9-201ENST00000402326 CDK17Q00537 523 aa3.16□□□□□ -1.9
CBX3P9-201ENST00000402326 SPIDRQ14159 915 aa3.16□□□□□ -1.9
CBX3P9-201ENST00000402326 ZNF267Q14586 743 aaPredicted RBP3.16□□□□□ -1.9
CBX3P9-201ENST00000402326 GRM3Q14832 879 aa3.16□□□□□ -1.9
CBX3P9-201ENST00000402326 MAN2A1Q16706 1144 aa3.16□□□□□ -1.9
CBX3P9-201ENST00000402326 MINDY4Q4G0A6 757 aa3.16□□□□□ -1.9
CBX3P9-201ENST00000402326 ARHGAP29Q52LW3 1261 aa3.16□□□□□ -1.9
CBX3P9-201ENST00000402326 ZMAT1Q5H9K5 638 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms