RNA–Protein interactions for RNA: ENST00000399338.8

ITSN1-207, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 3,115 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-207ENST00000399338 TRIM51Q9BSJ1 452 aa11.86□□□□□ -0.51
ITSN1-207ENST00000399338 NOC4LQ9BVI4 516 aaKnown RBP11.86□□□□□ -0.51
ITSN1-207ENST00000399338 COPRSQ9NQ92 184 aa11.86□□□□□ -0.51
ITSN1-207ENST00000399338 STXBP5LQ9Y2K9 1186 aa11.86□□□□□ -0.51
ITSN1-207ENST00000399338 CASZ1Q86V15 1759 aa11.85□□□□□ -0.51
ITSN1-207ENST00000399338 TRIM75PA6NK02 468 aa11.85□□□□□ -0.51
ITSN1-207ENST00000399338 FAM196BA6NMK8 535 aa11.85□□□□□ -0.51
ITSN1-207ENST00000399338 RASGRF2O14827 1237 aa11.85□□□□□ -0.51
ITSN1-207ENST00000399338 CREB1P16220 341 aa11.85□□□□□ -0.51
ITSN1-207ENST00000399338 PLCG2P16885 1265 aa11.85□□□□□ -0.51
ITSN1-207ENST00000399338 SLCO1A2P46721 670 aa11.85□□□□□ -0.51
ITSN1-207ENST00000399338 TBL3Q12788 808 aaKnown RBP11.85□□□□□ -0.51
ITSN1-207ENST00000399338 CCDC153Q494R4 210 aa11.85□□□□□ -0.51
ITSN1-207ENST00000399338 DUPD1Q68J44 220 aa11.85□□□□□ -0.51
ITSN1-207ENST00000399338 IZUMO2Q6UXV1 221 aa11.85□□□□□ -0.51
ITSN1-207ENST00000399338 KSR2Q6VAB6 950 aa11.85□□□□□ -0.51
ITSN1-207ENST00000399338 RRAGAQ7L523 313 aa11.85□□□□□ -0.51
ITSN1-207ENST00000399338 SYT2Q8N9I0 419 aaPredicted RBP11.85□□□□□ -0.51
ITSN1-207ENST00000399338 SCAIQ8N9R8 606 aa11.85□□□□□ -0.51
ITSN1-207ENST00000399338 ESR2Q92731 530 aa11.85□□□□□ -0.51
ITSN1-207ENST00000399338 NRDE2Q9H7Z3 1164 aa11.85□□□□□ -0.51
ITSN1-207ENST00000399338 DDX18Q9NVP1 670 aaKnown RBP11.85□□□□□ -0.51
ITSN1-207ENST00000399338 FMN2Q9NZ56 1722 aa11.85□□□□□ -0.51
ITSN1-207ENST00000399338 CCDC162PA2VCL2 907 aa11.85□□□□□ -0.51
ITSN1-207ENST00000399338 SPTLC1O15269 473 aa11.85□□□□□ -0.51
ITSN1-207ENST00000399338 ZBTB43O43298 467 aa11.85□□□□□ -0.51
ITSN1-207ENST00000399338 ZNF862O60290 1169 aa11.85□□□□□ -0.51
ITSN1-207ENST00000399338 GH1P01241 217 aa11.85□□□□□ -0.51
ITSN1-207ENST00000399338 TAC1P20366 129 aa11.85□□□□□ -0.51
ITSN1-207ENST00000399338 TCF7P36402 384 aaPredicted RBP11.85□□□□□ -0.51
ITSN1-207ENST00000399338 EIF4A1P60842 406 aaKnown RBP11.85□□□□□ -0.51
ITSN1-207ENST00000399338 HNRNPDQ14103 355 aaKnown RBP11.85□□□□□ -0.51
ITSN1-207ENST00000399338 MPP2Q14168 576 aa11.85□□□□□ -0.51
ITSN1-207ENST00000399338 SPTY2D1Q68D10 685 aaPredicted RBP11.85□□□□□ -0.51
ITSN1-207ENST00000399338 CSGALNACT2Q8N6G5 542 aa11.85□□□□□ -0.51
ITSN1-207ENST00000399338 ANKK1Q8NFD2 765 aa11.85□□□□□ -0.51
ITSN1-207ENST00000399338 BHMTQ93088 406 aa11.85□□□□□ -0.51
ITSN1-207ENST00000399338 EMILIN3Q9NT22 766 aa11.85□□□□□ -0.51
ITSN1-207ENST00000399338 STARD13Q9Y3M8 1113 aa11.85□□□□□ -0.51
ITSN1-207ENST00000399338 WASF2Q9Y6W5 498 aa11.85□□□□□ -0.51
ITSN1-207ENST00000399338 FBP2O00757 339 aa11.84□□□□□ -0.51
ITSN1-207ENST00000399338 DCTN3O75935 186 aa11.84□□□□□ -0.51
ITSN1-207ENST00000399338 ZFYP08048 801 aaPredicted RBP11.84□□□□□ -0.51
ITSN1-207ENST00000399338 PFKPQ01813 784 aa11.84□□□□□ -0.51
ITSN1-207ENST00000399338 MOGSQ13724 837 aa11.84□□□□□ -0.51
ITSN1-207ENST00000399338 PDXDC1Q6P996 788 aa11.84□□□□□ -0.51
ITSN1-207ENST00000399338 ZDHHC24Q6UX98 284 aa11.84□□□□□ -0.51
ITSN1-207ENST00000399338 GPIHBP1Q8IV16 184 aa11.84□□□□□ -0.51
ITSN1-207ENST00000399338 RIN3Q8TB24 985 aa11.84□□□□□ -0.51
ITSN1-207ENST00000399338 GDAP1Q8TB36 358 aa11.84□□□□□ -0.51
ITSN1-207ENST00000399338 ATP6V0A1Q93050 837 aa11.84□□□□□ -0.51
ITSN1-207ENST00000399338 PRICKLE1Q96MT3 831 aaPredicted RBP11.84□□□□□ -0.51
ITSN1-207ENST00000399338 STK33Q9BYT3 514 aa11.84□□□□□ -0.51
ITSN1-207ENST00000399338 SEMA4AQ9H3S1 761 aa11.84□□□□□ -0.51
ITSN1-207ENST00000399338 MLXIPLQ9NP71 852 aa11.84□□□□□ -0.51
ITSN1-207ENST00000399338 FAM207AQ9NSI2 230 aaPredicted RBP11.84□□□□□ -0.51
ITSN1-207ENST00000399338 USP40Q9NVE5 1235 aa11.84□□□□□ -0.51
ITSN1-207ENST00000399338 DENND2AQ9ULE3 1009 aa11.84□□□□□ -0.51
ITSN1-207ENST00000399338 HNRNPCL1O60812 293 aaKnown RBP11.84□□□□□ -0.51
ITSN1-207ENST00000399338 CCT8P50990 548 aa11.84□□□□□ -0.51
ITSN1-207ENST00000399338 CDR2Q01850 454 aa11.84□□□□□ -0.51
ITSN1-207ENST00000399338 KRT72Q14CN4 511 aa11.84□□□□□ -0.51
ITSN1-207ENST00000399338 KLHDC10Q6PID8 442 aa11.84□□□□□ -0.51
ITSN1-207ENST00000399338 RIC3Q7Z5B4 369 aa11.84□□□□□ -0.51
ITSN1-207ENST00000399338 METTL13Q8N6R0 699 aa11.84□□□□□ -0.51
ITSN1-207ENST00000399338 HELBQ8NG08 1087 aaPredicted RBP11.84□□□□□ -0.51
ITSN1-207ENST00000399338 TRIM31Q9BZY9 425 aa11.84□□□□□ -0.51
ITSN1-207ENST00000399338 SENP3Q9H4L4 574 aaPredicted RBP11.84□□□□□ -0.51
ITSN1-207ENST00000399338 NR2E3Q9Y5X4 410 aa11.84□□□□□ -0.51
ITSN1-207ENST00000399338 PITPNM2Q9BZ72 1349 aa11.84□□□□□ -0.51
ITSN1-207ENST00000399338 SLIT1O75093 1534 aa11.84□□□□□ -0.51
ITSN1-207ENST00000399338 NALCNQ8IZF0 1738 aa11.84□□□□□ -0.51
ITSN1-207ENST00000399338 MATN2O00339 956 aa11.84□□□□□ -0.51
ITSN1-207ENST00000399338 PSMA7O14818 248 aa11.84□□□□□ -0.51
ITSN1-207ENST00000399338 CBFA2T3O75081 653 aa11.84□□□□□ -0.51
ITSN1-207ENST00000399338 OXSR1O95747 527 aaPredicted RBP11.84□□□□□ -0.51
ITSN1-207ENST00000399338 IFNAR1P17181 557 aa11.84□□□□□ -0.51
ITSN1-207ENST00000399338 MTIF2P46199 727 aaKnown RBP11.84□□□□□ -0.51
ITSN1-207ENST00000399338 RFX5P48382 616 aaPredicted RBP11.84□□□□□ -0.51
ITSN1-207ENST00000399338 PATL1Q86TB9 770 aaKnown RBP11.84□□□□□ -0.51
ITSN1-207ENST00000399338 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.84□□□□□ -0.51
ITSN1-207ENST00000399338 PITPNM3Q9BZ71 974 aa11.84□□□□□ -0.51
ITSN1-207ENST00000399338 NT5C3AQ9H0P0 336 aa11.84□□□□□ -0.51
ITSN1-207ENST00000399338 RBM38Q9H0Z9 239 aaKnown RBP11.84□□□□□ -0.51
ITSN1-207ENST00000399338 EURLQ9NYK6 297 aa11.84□□□□□ -0.51
ITSN1-207ENST00000399338 ITM2BQ9Y287 266 aa11.84□□□□□ -0.51
ITSN1-207ENST00000399338 ARHGAP23Q9P227 1491 aa11.84□□□□□ -0.51
ITSN1-207ENST00000399338 FAM205CA6NFA0 338 aa11.83□□□□□ -0.52
ITSN1-207ENST00000399338 OPHN1O60890 802 aa11.83□□□□□ -0.52
ITSN1-207ENST00000399338 ADAM23O75077 832 aa11.83□□□□□ -0.52
ITSN1-207ENST00000399338 NSUN2Q08J23 767 aaKnown RBP eCLIP11.83□□□□□ -0.52
ITSN1-207ENST00000399338 PPP2R5CQ13362 524 aa11.83□□□□□ -0.52
ITSN1-207ENST00000399338 POTEEQ6S8J3 1075 aa11.83□□□□□ -0.52
ITSN1-207ENST00000399338 BARGINQ6ZT62 677 aa11.83□□□□□ -0.52
ITSN1-207ENST00000399338 PEX5LQ8IYB4 626 aa11.83□□□□□ -0.52
ITSN1-207ENST00000399338 FAM186BQ8IYM0 893 aa11.83□□□□□ -0.52
ITSN1-207ENST00000399338 CASP10Q92851 521 aa11.83□□□□□ -0.52
ITSN1-207ENST00000399338 ARHGEF2Q92974 986 aaKnown RBP11.83□□□□□ -0.52
ITSN1-207ENST00000399338 NEUROD6Q96NK8 337 aa11.83□□□□□ -0.52
ITSN1-207ENST00000399338 PPP1R10Q96QC0 940 aaKnown RBP11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms