RNA–Protein interactions for RNA: ENST00000397606.7

PTPRD-204, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 5,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-204ENST00000397606 FAM133AQ8N9E0 248 aa8.95□□□□□ -0.98
PTPRD-204ENST00000397606 CAPZA3Q96KX2 299 aa8.95□□□□□ -0.98
PTPRD-204ENST00000397606 PANX2Q96RD6 677 aa8.95□□□□□ -0.98
PTPRD-204ENST00000397606 CEP72Q9P209 647 aa8.95□□□□□ -0.98
PTPRD-204ENST00000397606 USTQ9Y2C2 406 aa8.95□□□□□ -0.98
PTPRD-204ENST00000397606 ATP8B3O60423 1300 aa8.95□□□□□ -0.98
PTPRD-204ENST00000397606 SNED1Q8TER0 1413 aa8.94□□□□□ -0.98
PTPRD-204ENST00000397606 PHF20L1A8MW92 1017 aa8.94□□□□□ -0.98
PTPRD-204ENST00000397606 SOCS7O14512 581 aa8.94□□□□□ -0.98
PTPRD-204ENST00000397606 FKTNO75072 461 aa8.94□□□□□ -0.98
PTPRD-204ENST00000397606 SLU7O95391 586 aaKnown RBP8.94□□□□□ -0.98
PTPRD-204ENST00000397606 RARRES1P49788 294 aa8.94□□□□□ -0.98
PTPRD-204ENST00000397606 GIT2Q14161 759 aa8.94□□□□□ -0.98
PTPRD-204ENST00000397606 ZC2HC1CQ53FD0 456 aaPredicted RBP8.94□□□□□ -0.98
PTPRD-204ENST00000397606 ENOSF1Q7L5Y1 443 aa8.94□□□□□ -0.98
PTPRD-204ENST00000397606 MTG1Q9BT17 334 aaPredicted RBP8.94□□□□□ -0.98
PTPRD-204ENST00000397606 XPNPEP3Q9NQH7 507 aa8.94□□□□□ -0.98
PTPRD-204ENST00000397606 DNAJC12Q9UKB3 198 aa8.94□□□□□ -0.98
PTPRD-204ENST00000397606 NFASCO94856 1347 aa8.94□□□□□ -0.98
PTPRD-204ENST00000397606 ANKRD36CQ5JPF3 1778 aa8.94□□□□□ -0.98
PTPRD-204ENST00000397606 PSMD10O75832 226 aa8.94□□□□□ -0.98
PTPRD-204ENST00000397606 CYP2C19P33261 490 aa8.94□□□□□ -0.98
PTPRD-204ENST00000397606 ADCYAP1R1P41586 468 aa8.94□□□□□ -0.98
PTPRD-204ENST00000397606 DHX40Q8IX18 779 aaKnown RBP8.94□□□□□ -0.98
PTPRD-204ENST00000397606 ZNF710Q8N1W2 664 aa8.94□□□□□ -0.98
PTPRD-204ENST00000397606 FBXL13Q8NEE6 735 aa8.94□□□□□ -0.98
PTPRD-204ENST00000397606 CENPHQ9H3R5 247 aa8.94□□□□□ -0.98
PTPRD-204ENST00000397606 AMFRQ9UKV5 643 aa8.94□□□□□ -0.98
PTPRD-204ENST00000397606 PPP2R2CQ9Y2T4 447 aa8.94□□□□□ -0.98
PTPRD-204ENST00000397606 A0A1W2PQC6 194 aa8.94□□□□□ -0.98
PTPRD-204ENST00000397606 DAPK3O43293 454 aa8.94□□□□□ -0.98
PTPRD-204ENST00000397606 HUS1O60921 280 aa8.94□□□□□ -0.98
PTPRD-204ENST00000397606 REPS2Q8NFH8 660 aa8.94□□□□□ -0.98
PTPRD-204ENST00000397606 KIF12Q96FN5 646 aa8.94□□□□□ -0.98
PTPRD-204ENST00000397606 DESI2Q9BSY9 194 aa8.94□□□□□ -0.98
PTPRD-204ENST00000397606 MTIF3Q9H2K0 278 aaKnown RBP8.94□□□□□ -0.98
PTPRD-204ENST00000397606 TBX20Q9UMR3 447 aa8.94□□□□□ -0.98
PTPRD-204ENST00000397606 IRS2Q9Y4H2 1338 aa8.94□□□□□ -0.98
PTPRD-204ENST00000397606 GBP2P32456 591 aaPredicted RBP8.94□□□□□ -0.98
PTPRD-204ENST00000397606 CLCN1P35523 988 aa8.94□□□□□ -0.98
PTPRD-204ENST00000397606 TMEM62Q0P6H9 643 aa8.94□□□□□ -0.98
PTPRD-204ENST00000397606 SNRNP35Q16560 246 aaKnown RBP8.94□□□□□ -0.98
PTPRD-204ENST00000397606 TMEM119Q4V9L6 283 aa8.94□□□□□ -0.98
PTPRD-204ENST00000397606 CELF3Q5SZQ8 465 aaKnown RBP8.94□□□□□ -0.98
PTPRD-204ENST00000397606 C10orf76Q5T2E6 689 aa8.94□□□□□ -0.98
PTPRD-204ENST00000397606 NOTUMQ6P988 496 aa8.94□□□□□ -0.98
PTPRD-204ENST00000397606 SCARA5Q6ZMJ2 495 aa8.94□□□□□ -0.98
PTPRD-204ENST00000397606 OR6B3Q8NGW1 331 aa8.94□□□□□ -0.98
PTPRD-204ENST00000397606 PRPF31Q8WWY3 499 aaKnown RBP8.94□□□□□ -0.98
PTPRD-204ENST00000397606 ZNF560Q96MR9 790 aa8.94□□□□□ -0.98
PTPRD-204ENST00000397606 PRDM5Q9NQX1 630 aaPredicted RBP8.94□□□□□ -0.98
PTPRD-204ENST00000397606 LIMA1Q9UHB6 759 aaKnown RBP8.94□□□□□ -0.98
PTPRD-204ENST00000397606 SLC45A1Q9Y2W3 748 aa8.94□□□□□ -0.98
PTPRD-204ENST00000397606 ADCY3O60266 1144 aa8.93□□□□□ -0.98
PTPRD-204ENST00000397606 ITGB5P18084 799 aa8.93□□□□□ -0.98
PTPRD-204ENST00000397606 HADHQ16836 314 aaKnown RBP8.93□□□□□ -0.98
PTPRD-204ENST00000397606 EDEM3Q9BZQ6 932 aa8.93□□□□□ -0.98
PTPRD-204ENST00000397606 RIPK3Q9Y572 518 aa8.93□□□□□ -0.98
PTPRD-204ENST00000397606 EMSYQ7Z589 1322 aa8.93□□□□□ -0.98
PTPRD-204ENST00000397606 COL2A1P02458 1487 aaPredicted RBP8.93□□□□□ -0.98
PTPRD-204ENST00000397606 SPATA31C2B4DYI2 1134 aa8.93□□□□□ -0.98
PTPRD-204ENST00000397606 RNF8O76064 485 aa8.93□□□□□ -0.98
PTPRD-204ENST00000397606 TRIM49P0CI25 452 aa8.93□□□□□ -0.98
PTPRD-204ENST00000397606 TRIM49CP0CI26 452 aa8.93□□□□□ -0.98
PTPRD-204ENST00000397606 NEFHP12036 1026 aa8.93□□□□□ -0.98
PTPRD-204ENST00000397606 INSRRP14616 1297 aa8.93□□□□□ -0.98
PTPRD-204ENST00000397606 CLCN3P51790 818 aa8.93□□□□□ -0.98
PTPRD-204ENST00000397606 RRP1BQ14684 758 aaKnown RBP8.93□□□□□ -0.98
PTPRD-204ENST00000397606 DAAM2Q86T65 1068 aa8.93□□□□□ -0.98
PTPRD-204ENST00000397606 ABRAQ8N0Z2 381 aa8.93□□□□□ -0.98
PTPRD-204ENST00000397606 THEM5Q8N1Q8 247 aa8.93□□□□□ -0.98
PTPRD-204ENST00000397606 KIAA1524Q8TCG1 905 aa8.93□□□□□ -0.98
PTPRD-204ENST00000397606 HAS1Q92839 578 aa8.93□□□□□ -0.98
PTPRD-204ENST00000397606 INPP4AQ96PE3 977 aaPredicted RBP8.93□□□□□ -0.98
PTPRD-204ENST00000397606 STARD7Q9NQZ5 370 aa8.93□□□□□ -0.98
PTPRD-204ENST00000397606 STIM2Q9P246 746 aa8.93□□□□□ -0.98
PTPRD-204ENST00000397606 NRBP1Q9UHY1 535 aa8.93□□□□□ -0.98
PTPRD-204ENST00000397606 DAAM1Q9Y4D1 1078 aa8.93□□□□□ -0.98
PTPRD-204ENST00000397606 ZBBXA8MT70 800 aa8.93□□□□□ -0.98
PTPRD-204ENST00000397606 DCDC2CA8MYV0 355 aa8.93□□□□□ -0.98
PTPRD-204ENST00000397606 MFAP3LO75121 409 aa8.93□□□□□ -0.98
PTPRD-204ENST00000397606 IL18RAPO95256 599 aa8.93□□□□□ -0.98
PTPRD-204ENST00000397606 NPTX2P47972 431 aa8.93□□□□□ -0.98
PTPRD-204ENST00000397606 FMR1Q06787 632 aaKnown RBP eCLIP8.93□□□□□ -0.98
PTPRD-204ENST00000397606 FSCN1Q16658 493 aaKnown RBP8.93□□□□□ -0.98
PTPRD-204ENST00000397606 DLK2Q6UY11 383 aa8.93□□□□□ -0.98
PTPRD-204ENST00000397606 PDCL2Q8N4E4 241 aa8.93□□□□□ -0.98
PTPRD-204ENST00000397606 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.93□□□□□ -0.98
PTPRD-204ENST00000397606 MTMR8Q96EF0 704 aa8.93□□□□□ -0.98
PTPRD-204ENST00000397606 HEXIM2Q96MH2 286 aaKnown RBP8.93□□□□□ -0.98
PTPRD-204ENST00000397606 PNMA5Q96PV4 448 aa8.93□□□□□ -0.98
PTPRD-204ENST00000397606 TARS2Q9BW92 718 aaKnown RBP8.93□□□□□ -0.98
PTPRD-204ENST00000397606 GPRC5CQ9NQ84 441 aa8.93□□□□□ -0.98
PTPRD-204ENST00000397606 OLFML3Q9NRN5 406 aa8.93□□□□□ -0.98
PTPRD-204ENST00000397606 BTBD7Q9P203 1132 aa8.93□□□□□ -0.98
PTPRD-204ENST00000397606 EML1O00423 815 aa8.93□□□□□ -0.98
PTPRD-204ENST00000397606 ATP2A1O14983 1001 aa8.93□□□□□ -0.98
PTPRD-204ENST00000397606 TUBBP07437 444 aa8.93□□□□□ -0.98
PTPRD-204ENST00000397606 ACOT2P49753 483 aa8.93□□□□□ -0.98
PTPRD-204ENST00000397606 IFFO1Q0D2I5 559 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms