RNA–Protein interactions for RNA: ENST00000397477.2

CPSF1P1-201, Transcript of cleavage and polyadenylation specific factor 1 pseudogene 1, humanhuman

BASIC

Gene CPSF1P1, Length 3,730 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1P1-201ENST00000397477 PASD1Q8IV76 773 aa11.3□□□□□ -0.6
CPSF1P1-201ENST00000397477 CCDC105Q8IYK2 499 aa11.3□□□□□ -0.6
CPSF1P1-201ENST00000397477 SYCE1Q8N0S2 351 aa11.3□□□□□ -0.6
CPSF1P1-201ENST00000397477 MICALL1Q8N3F8 863 aa11.3□□□□□ -0.6
CPSF1P1-201ENST00000397477 USP38Q8NB14 1042 aa11.3□□□□□ -0.6
CPSF1P1-201ENST00000397477 FAM213AQ9BRX8 229 aa11.3□□□□□ -0.6
CPSF1P1-201ENST00000397477 APEX2Q9UBZ4 518 aa11.3□□□□□ -0.6
CPSF1P1-201ENST00000397477 LCMT1Q9UIC8 334 aa11.3□□□□□ -0.6
CPSF1P1-201ENST00000397477 EBAG9O00559 213 aa11.3□□□□□ -0.6
CPSF1P1-201ENST00000397477 SLCO1A2P46721 670 aa11.3□□□□□ -0.6
CPSF1P1-201ENST00000397477 TKFCQ3LXA3 575 aa11.3□□□□□ -0.6
CPSF1P1-201ENST00000397477 SEZ6Q53EL9 994 aa11.3□□□□□ -0.6
CPSF1P1-201ENST00000397477 NBPF12Q5TAG4 269 aaPredicted RBP11.3□□□□□ -0.6
CPSF1P1-201ENST00000397477 ZNF653Q96CK0 615 aa11.3□□□□□ -0.6
CPSF1P1-201ENST00000397477 ARHGEF26Q96DR7 871 aa11.3□□□□□ -0.6
CPSF1P1-201ENST00000397477 RRP15Q9Y3B9 282 aaKnown RBP11.3□□□□□ -0.6
CPSF1P1-201ENST00000397477 F8VZ95 297 aa11.29□□□□□ -0.6
CPSF1P1-201ENST00000397477 KIAA0754O94854 1291 aa11.29□□□□□ -0.6
CPSF1P1-201ENST00000397477 CIITAP33076 1130 aa11.29□□□□□ -0.6
CPSF1P1-201ENST00000397477 SETQ01105 290 aaPredicted RBP11.29□□□□□ -0.6
CPSF1P1-201ENST00000397477 ASTE1Q2TB18 679 aaPredicted RBP11.29□□□□□ -0.6
CPSF1P1-201ENST00000397477 EMBQ6PCB8 327 aa11.29□□□□□ -0.6
CPSF1P1-201ENST00000397477 DHX38Q92620 1227 aaKnown RBP11.29□□□□□ -0.6
CPSF1P1-201ENST00000397477 MAGOHBQ96A72 148 aaKnown RBP11.29□□□□□ -0.6
CPSF1P1-201ENST00000397477 NRAPQ86VF7 1730 aa11.29□□□□□ -0.6
CPSF1P1-201ENST00000397477 NAV1Q8NEY1 1877 aa11.29□□□□□ -0.6
CPSF1P1-201ENST00000397477 COL22A1Q8NFW1 1626 aaPredicted RBP11.29□□□□□ -0.6
CPSF1P1-201ENST00000397477 ARHGEF19Q8IW93 802 aa11.29□□□□□ -0.6
CPSF1P1-201ENST00000397477 MICALL2Q8IY33 904 aa11.29□□□□□ -0.6
CPSF1P1-201ENST00000397477 MRRFQ96E11 262 aaKnown RBP11.29□□□□□ -0.6
CPSF1P1-201ENST00000397477 STK33Q9BYT3 514 aa11.29□□□□□ -0.6
CPSF1P1-201ENST00000397477 TAOK3Q9H2K8 898 aa11.29□□□□□ -0.6
CPSF1P1-201ENST00000397477 PPP1R9AQ9ULJ8 1098 aa11.29□□□□□ -0.6
CPSF1P1-201ENST00000397477 HGSO14964 777 aaPredicted RBP11.29□□□□□ -0.6
CPSF1P1-201ENST00000397477 PJA2O43164 708 aa11.29□□□□□ -0.6
CPSF1P1-201ENST00000397477 VIL1P09327 827 aaKnown RBP11.29□□□□□ -0.6
CPSF1P1-201ENST00000397477 MYZAPP0CAP1 466 aa11.29□□□□□ -0.6
CPSF1P1-201ENST00000397477 PPP3CAQ08209 521 aa11.29□□□□□ -0.6
CPSF1P1-201ENST00000397477 PPP1R7Q15435 360 aa11.29□□□□□ -0.6
CPSF1P1-201ENST00000397477 UGCGQ16739 394 aa11.29□□□□□ -0.6
CPSF1P1-201ENST00000397477 SPDYE2Q495Y8 402 aa11.29□□□□□ -0.6
CPSF1P1-201ENST00000397477 TAB3Q8N5C8 712 aaPredicted RBP11.29□□□□□ -0.6
CPSF1P1-201ENST00000397477 SYN2Q92777 582 aaPredicted RBP11.29□□□□□ -0.6
CPSF1P1-201ENST00000397477 SLC5A5Q92911 643 aa11.29□□□□□ -0.6
CPSF1P1-201ENST00000397477 CCDC114Q96M63 670 aa11.29□□□□□ -0.6
CPSF1P1-201ENST00000397477 PPP1R16BQ96T49 567 aa11.29□□□□□ -0.6
CPSF1P1-201ENST00000397477 FAM118BQ9BPY3 351 aa11.29□□□□□ -0.6
CPSF1P1-201ENST00000397477 E7EVH7 732 aa11.28□□□□□ -0.6
CPSF1P1-201ENST00000397477 SGPL1O95470 568 aa11.28□□□□□ -0.6
CPSF1P1-201ENST00000397477 MARK3P27448 753 aa11.28□□□□□ -0.6
CPSF1P1-201ENST00000397477 LIG3P49916 1009 aa11.28□□□□□ -0.6
CPSF1P1-201ENST00000397477 ADCY1Q08828 1119 aa11.28□□□□□ -0.6
CPSF1P1-201ENST00000397477 PHLDB3Q6NSJ2 640 aa11.28□□□□□ -0.6
CPSF1P1-201ENST00000397477 ANKRD35Q8N283 1001 aa11.28□□□□□ -0.6
CPSF1P1-201ENST00000397477 LNX1Q8TBB1 728 aaPredicted RBP11.28□□□□□ -0.6
CPSF1P1-201ENST00000397477 SYTL5Q8TDW5 730 aaPredicted RBP11.28□□□□□ -0.6
CPSF1P1-201ENST00000397477 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.28□□□□□ -0.6
CPSF1P1-201ENST00000397477 KIAA1551Q9HCM1 1747 aa11.28□□□□□ -0.6
CPSF1P1-201ENST00000397477 KCNJ1P48048 391 aa11.28□□□□□ -0.6
CPSF1P1-201ENST00000397477 ACOT2P49753 483 aa11.28□□□□□ -0.6
CPSF1P1-201ENST00000397477 LIG4P49917 911 aa11.28□□□□□ -0.6
CPSF1P1-201ENST00000397477 ITGB3BPQ13352 177 aaPredicted RBP11.28□□□□□ -0.6
CPSF1P1-201ENST00000397477 ZNF394Q53GI3 561 aa11.28□□□□□ -0.6
CPSF1P1-201ENST00000397477 SEL1L2Q5TEA6 688 aa11.28□□□□□ -0.6
CPSF1P1-201ENST00000397477 TMEM143Q96AN5 459 aa11.28□□□□□ -0.6
CPSF1P1-201ENST00000397477 DEFB129Q9H1M3 183 aa11.28□□□□□ -0.6
CPSF1P1-201ENST00000397477 TMEM206Q9H813 350 aa11.28□□□□□ -0.6
CPSF1P1-201ENST00000397477 OLFML3Q9NRN5 406 aa11.28□□□□□ -0.6
CPSF1P1-201ENST00000397477 PIM2Q9P1W9 311 aa11.28□□□□□ -0.6
CPSF1P1-201ENST00000397477 DDX60LQ5H9U9 1706 aaKnown RBP11.28□□□□□ -0.6
CPSF1P1-201ENST00000397477 GSTTP1A0A1W2PQM5 241 aa11.27□□□□□ -0.6
CPSF1P1-201ENST00000397477 SLC16A3O15427 465 aaKnown RBP11.27□□□□□ -0.6
CPSF1P1-201ENST00000397477 ICAM1P05362 532 aa11.27□□□□□ -0.6
CPSF1P1-201ENST00000397477 RARRES1P49788 294 aa11.27□□□□□ -0.6
CPSF1P1-201ENST00000397477 OSTNP61366 133 aa11.27□□□□□ -0.6
CPSF1P1-201ENST00000397477 TNFAIP1Q13829 316 aa11.27□□□□□ -0.6
CPSF1P1-201ENST00000397477 LRRC31Q6UY01 552 aa11.27□□□□□ -0.6
CPSF1P1-201ENST00000397477 DLK2Q6UY11 383 aa11.27□□□□□ -0.6
CPSF1P1-201ENST00000397477 INTS8Q75QN2 995 aaKnown RBP11.27□□□□□ -0.6
CPSF1P1-201ENST00000397477 AENQ8WTP8 325 aaKnown RBP11.27□□□□□ -0.6
CPSF1P1-201ENST00000397477 WNK4Q96J92 1243 aa11.27□□□□□ -0.6
CPSF1P1-201ENST00000397477 PBKQ96KB5 322 aa11.27□□□□□ -0.6
CPSF1P1-201ENST00000397477 IFT74Q96LB3 600 aa11.27□□□□□ -0.6
CPSF1P1-201ENST00000397477 RNPC3Q96LT9 517 aaKnown RBP11.27□□□□□ -0.6
CPSF1P1-201ENST00000397477 AGPAT1Q99943 283 aa11.27□□□□□ -0.6
CPSF1P1-201ENST00000397477 FBXL5Q9UKA1 691 aa11.27□□□□□ -0.6
CPSF1P1-201ENST00000397477 GOLGA8KD6RF30 607 aa11.27□□□□□ -0.61
CPSF1P1-201ENST00000397477 MYO1CO00159 1063 aa11.27□□□□□ -0.61
CPSF1P1-201ENST00000397477 POLGP54098 1239 aaPredicted RBP11.27□□□□□ -0.61
CPSF1P1-201ENST00000397477 ERVK-9P63128 1117 aa11.27□□□□□ -0.61
CPSF1P1-201ENST00000397477 DALRD3Q5D0E6 543 aaKnown RBP11.27□□□□□ -0.61
CPSF1P1-201ENST00000397477 UBL4BQ8N7F7 174 aa11.27□□□□□ -0.61
CPSF1P1-201ENST00000397477 NOVA2Q9UNW9 492 aaKnown RBP11.27□□□□□ -0.61
CPSF1P1-201ENST00000397477 LAMB2P55268 1798 aa11.27□□□□□ -0.61
CPSF1P1-201ENST00000397477 WDR64B1ANS9 1081 aa11.27□□□□□ -0.61
CPSF1P1-201ENST00000397477 VCAM1P19320 739 aa11.27□□□□□ -0.61
CPSF1P1-201ENST00000397477 PPP2R5CQ13362 524 aa11.27□□□□□ -0.61
CPSF1P1-201ENST00000397477 BTNL9Q6UXG8 535 aa11.27□□□□□ -0.61
CPSF1P1-201ENST00000397477 HEMGNQ9BXL5 484 aa11.27□□□□□ -0.61
CPSF1P1-201ENST00000397477 RANBP17Q9H2T7 1088 aaKnown RBP11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms