RNA–Protein interactions for RNA: ENST00000397411.6

TSPAN4-207, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,025 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-207ENST00000397411 KRT85P78386 507 aa28.05■■■□□ 2.08
TSPAN4-207ENST00000397411 MCM6Q14566 821 aa28.05■■■□□ 2.08
TSPAN4-207ENST00000397411 PCBP1Q15365 356 aaKnown RBP eCLIP28.05■■■□□ 2.08
TSPAN4-207ENST00000397411 CCDC73Q6ZRK6 1079 aa28.05■■■□□ 2.08
TSPAN4-207ENST00000397411 GPBP1Q86WP2 473 aa28.05■■■□□ 2.08
TSPAN4-207ENST00000397411 IFNLR1Q8IU57 520 aaPredicted RBP28.05■■■□□ 2.08
TSPAN4-207ENST00000397411 NFKBIZQ9BYH8 718 aa28.05■■■□□ 2.08
TSPAN4-207ENST00000397411 MTMR10Q9NXD2 777 aa28.05■■■□□ 2.08
TSPAN4-207ENST00000397411 KCND2Q9NZV8 630 aa28.05■■■□□ 2.08
TSPAN4-207ENST00000397411 CCDC169A6NNP5 214 aa28.04■■■□□ 2.08
TSPAN4-207ENST00000397411 SKIP12755 728 aa28.04■■■□□ 2.08
TSPAN4-207ENST00000397411 LIG1P18858 919 aa28.04■■■□□ 2.08
TSPAN4-207ENST00000397411 GUCY2CP25092 1073 aa28.04■■■□□ 2.08
TSPAN4-207ENST00000397411 DDIT3P35638 169 aa28.04■■■□□ 2.08
TSPAN4-207ENST00000397411 FAM189BP81408 668 aa28.04■■■□□ 2.08
TSPAN4-207ENST00000397411 TAP1Q03518 808 aa28.04■■■□□ 2.08
TSPAN4-207ENST00000397411 TMEM132AQ24JP5 1023 aa28.04■■■□□ 2.08
TSPAN4-207ENST00000397411 FIBCD1Q8N539 461 aa28.04■■■□□ 2.08
TSPAN4-207ENST00000397411 BSNDQ8WZ55 320 aa28.04■■■□□ 2.08
TSPAN4-207ENST00000397411 LARP4BQ92615 738 aaKnown RBP28.04■■■□□ 2.08
TSPAN4-207ENST00000397411 CERS4Q9HA82 394 aa28.04■■■□□ 2.08
TSPAN4-207ENST00000397411 AGPAT5Q9NUQ2 364 aa28.04■■■□□ 2.08
TSPAN4-207ENST00000397411 MYO9BQ13459 2157 aa28.04■■■□□ 2.08
TSPAN4-207ENST00000397411 DGKIO75912 1065 aa28.03■■■□□ 2.08
TSPAN4-207ENST00000397411 AXLP30530 894 aa28.03■■■□□ 2.08
TSPAN4-207ENST00000397411 PEX3P56589 373 aa28.03■■■□□ 2.08
TSPAN4-207ENST00000397411 MBTD1Q05BQ5 628 aa28.03■■■□□ 2.08
TSPAN4-207ENST00000397411 BTG3Q14201 252 aaPredicted RBP28.03■■■□□ 2.08
TSPAN4-207ENST00000397411 ELAC1Q9H777 363 aaKnown RBP28.03■■■□□ 2.08
TSPAN4-207ENST00000397411 BLOC1S4Q9NUP1 217 aa28.03■■■□□ 2.08
TSPAN4-207ENST00000397411 TMEM161AQ9NX61 479 aa28.03■■■□□ 2.08
TSPAN4-207ENST00000397411 STK17AQ9UEE5 414 aa28.03■■■□□ 2.08
TSPAN4-207ENST00000397411 KCNG1Q9UIX4 513 aa28.03■■■□□ 2.08
TSPAN4-207ENST00000397411 RCOR1Q9UKL0 485 aa28.03■■■□□ 2.08
TSPAN4-207ENST00000397411 SFI1A8K8P3 1242 aa28.02■■■□□ 2.08
TSPAN4-207ENST00000397411 STAT6P42226 847 aa28.02■■■□□ 2.08
TSPAN4-207ENST00000397411 DMP1Q13316 513 aaPredicted RBP28.02■■■□□ 2.08
TSPAN4-207ENST00000397411 GRIN2CQ14957 1233 aa28.02■■■□□ 2.08
TSPAN4-207ENST00000397411 ECHDC2Q86YB7 292 aa28.02■■■□□ 2.08
TSPAN4-207ENST00000397411 ARNTL2Q8WYA1 636 aa28.02■■■□□ 2.08
TSPAN4-207ENST00000397411 SPATA32Q96LK8 384 aa28.02■■■□□ 2.08
TSPAN4-207ENST00000397411 PRMT7Q9NVM4 692 aaPredicted RBP28.02■■■□□ 2.08
TSPAN4-207ENST00000397411 MYH11P35749 1972 aa28.02■■■□□ 2.08
TSPAN4-207ENST00000397411 NPHP3-ACAD11A0A0J9YXS1 232 aa28.01■■■□□ 2.07
TSPAN4-207ENST00000397411 A0A0U1RQF3 1178 aa28.01■■■□□ 2.07
TSPAN4-207ENST00000397411 LINC01553A4QN01 128 aa28.01■■■□□ 2.07
TSPAN4-207ENST00000397411 MAPK6Q16659 721 aa28.01■■■□□ 2.07
TSPAN4-207ENST00000397411 PAN2Q504Q3 1202 aaKnown RBP28.01■■■□□ 2.07
TSPAN4-207ENST00000397411 SV2BQ7L1I2 683 aa28.01■■■□□ 2.07
TSPAN4-207ENST00000397411 ABI1Q8IZP0 508 aa28.01■■■□□ 2.07
TSPAN4-207ENST00000397411 PDILTQ8N807 584 aa28.01■■■□□ 2.07
TSPAN4-207ENST00000397411 CPB2Q96IY4 423 aa28.01■■■□□ 2.07
TSPAN4-207ENST00000397411 TGS1Q96RS0 853 aaKnown RBP28.01■■■□□ 2.07
TSPAN4-207ENST00000397411 C17orf75Q9HAS0 396 aa28.01■■■□□ 2.07
TSPAN4-207ENST00000397411 KMT5AQ9NQR1 393 aa28.01■■■□□ 2.07
TSPAN4-207ENST00000397411 FAM13BQ9NYF5 915 aa28.01■■■□□ 2.07
TSPAN4-207ENST00000397411 PCDHA7Q9UN72 937 aa28.01■■■□□ 2.07
TSPAN4-207ENST00000397411 HOXA2O43364 376 aa28■■■□□ 2.07
TSPAN4-207ENST00000397411 TSPAN1O60635 241 aa28■■■□□ 2.07
TSPAN4-207ENST00000397411 EOMESO95936 686 aa28■■■□□ 2.07
TSPAN4-207ENST00000397411 EFNA5P52803 228 aa28■■■□□ 2.07
TSPAN4-207ENST00000397411 SMTNP53814 917 aa28■■■□□ 2.07
TSPAN4-207ENST00000397411 NOTUMQ6P988 496 aa28■■■□□ 2.07
TSPAN4-207ENST00000397411 SP7Q8TDD2 431 aaPredicted RBP28■■■□□ 2.07
TSPAN4-207ENST00000397411 CDX2Q99626 313 aaPredicted RBP28■■■□□ 2.07
TSPAN4-207ENST00000397411 ZHX3Q9H4I2 956 aa28■■■□□ 2.07
TSPAN4-207ENST00000397411 PRDM12Q9H4Q4 367 aa28■■■□□ 2.07
TSPAN4-207ENST00000397411 MTUS1Q9ULD2 1270 aa28■■■□□ 2.07
TSPAN4-207ENST00000397411 ADGRA3Q8IWK6 1321 aa27.99■■■□□ 2.07
TSPAN4-207ENST00000397411 TBKBP1A7MCY6 615 aa27.99■■■□□ 2.07
TSPAN4-207ENST00000397411 K7ERI5 159 aa27.99■■■□□ 2.07
TSPAN4-207ENST00000397411 FAM13AO94988 1023 aa27.99■■■□□ 2.07
TSPAN4-207ENST00000397411 RAB27AP51159 221 aa27.99■■■□□ 2.07
TSPAN4-207ENST00000397411 CACNB1Q02641 598 aaPredicted RBP27.99■■■□□ 2.07
TSPAN4-207ENST00000397411 ARSHQ5FYA8 562 aa27.99■■■□□ 2.07
TSPAN4-207ENST00000397411 CDCA2Q69YH5 1023 aaPredicted RBP27.99■■■□□ 2.07
TSPAN4-207ENST00000397411 CMTR2Q8IYT2 770 aaKnown RBP27.99■■■□□ 2.07
TSPAN4-207ENST00000397411 PGBD4Q96DM1 585 aa27.99■■■□□ 2.07
TSPAN4-207ENST00000397411 GAS2L1Q99501 681 aaPredicted RBP27.99■■■□□ 2.07
TSPAN4-207ENST00000397411 KIFC3Q9BVG8 833 aa27.99■■■□□ 2.07
TSPAN4-207ENST00000397411 FAM105AQ9NUU6 356 aa27.99■■■□□ 2.07
TSPAN4-207ENST00000397411 ARHGEF15O94989 841 aa27.98■■■□□ 2.07
TSPAN4-207ENST00000397411 PRKCBP05771 671 aa27.98■■■□□ 2.07
TSPAN4-207ENST00000397411 FGFR1P11362 822 aa27.98■■■□□ 2.07
TSPAN4-207ENST00000397411 HOXA11P31270 313 aaPredicted RBP27.98■■■□□ 2.07
TSPAN4-207ENST00000397411 NPTX2P47972 431 aa27.98■■■□□ 2.07
TSPAN4-207ENST00000397411 GATMP50440 423 aa27.98■■■□□ 2.07
TSPAN4-207ENST00000397411 SPOUT1Q5T280 376 aaKnown RBP27.98■■■□□ 2.07
TSPAN4-207ENST00000397411 DAW1Q8N136 415 aa27.98■■■□□ 2.07
TSPAN4-207ENST00000397411 CRIPAKQ8N1N5 446 aa27.98■■■□□ 2.07
TSPAN4-207ENST00000397411 LRRC15Q8TF66 581 aa27.98■■■□□ 2.07
TSPAN4-207ENST00000397411 ZNF689Q96CS4 500 aaPredicted RBP27.98■■■□□ 2.07
TSPAN4-207ENST00000397411 CCDC51Q96ER9 411 aa27.98■■■□□ 2.07
TSPAN4-207ENST00000397411 PRIMPOLQ96LW4 560 aa27.98■■■□□ 2.07
TSPAN4-207ENST00000397411 TRAIPQ9BWF2 469 aa27.98■■■□□ 2.07
TSPAN4-207ENST00000397411 TRIM6Q9C030 488 aaPredicted RBP27.98■■■□□ 2.07
TSPAN4-207ENST00000397411 LARSQ9P2J5 1176 aaKnown RBP27.98■■■□□ 2.07
TSPAN4-207ENST00000397411 RBM19Q9Y4C8 960 aaKnown RBP27.98■■■□□ 2.07
TSPAN4-207ENST00000397411 PCDHB2Q9Y5E7 798 aa27.98■■■□□ 2.07
TSPAN4-207ENST00000397411 LAMA3Q16787 3333 aa27.97■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms