RNA–Protein interactions for RNA: ENST00000397378.7

NEDD9-203, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-203ENST00000397378 TAF6LQ9Y6J9 622 aa10.71□□□□□ -0.69
NEDD9-203ENST00000397378 ZZEF1O43149 2961 aa10.71□□□□□ -0.7
NEDD9-203ENST00000397378 ZBTB42B2RXF5 422 aa10.7□□□□□ -0.7
NEDD9-203ENST00000397378 INPPL1O15357 1258 aa10.7□□□□□ -0.7
NEDD9-203ENST00000397378 SSBP05455 408 aaKnown RBP eCLIP10.7□□□□□ -0.7
NEDD9-203ENST00000397378 MYBP10242 640 aa10.7□□□□□ -0.7
NEDD9-203ENST00000397378 ZSCAN20P17040 1043 aaPredicted RBP10.7□□□□□ -0.7
NEDD9-203ENST00000397378 CD72P21854 359 aa10.7□□□□□ -0.7
NEDD9-203ENST00000397378 GPC5P78333 572 aa10.7□□□□□ -0.7
NEDD9-203ENST00000397378 RING1Q06587 406 aa10.7□□□□□ -0.7
NEDD9-203ENST00000397378 ITGB3BPQ13352 177 aaPredicted RBP10.7□□□□□ -0.7
NEDD9-203ENST00000397378 HTR4Q13639 388 aa10.7□□□□□ -0.7
NEDD9-203ENST00000397378 MLF2Q15773 248 aaPredicted RBP10.7□□□□□ -0.7
NEDD9-203ENST00000397378 CSRP2Q16527 193 aa10.7□□□□□ -0.7
NEDD9-203ENST00000397378 KIZQ2M2Z5 673 aa10.7□□□□□ -0.7
NEDD9-203ENST00000397378 CEP55Q53EZ4 464 aa10.7□□□□□ -0.7
NEDD9-203ENST00000397378 CLLU1OSQ5K130 101 aa10.7□□□□□ -0.7
NEDD9-203ENST00000397378 ZBTB41Q5SVQ8 909 aa10.7□□□□□ -0.7
NEDD9-203ENST00000397378 FAM160B1Q5W0V3 765 aa10.7□□□□□ -0.7
NEDD9-203ENST00000397378 ABHD15Q6UXT9 468 aa10.7□□□□□ -0.7
NEDD9-203ENST00000397378 DDX53Q86TM3 631 aaKnown RBP10.7□□□□□ -0.7
NEDD9-203ENST00000397378 TMTC2Q8N394 836 aa10.7□□□□□ -0.7
NEDD9-203ENST00000397378 RUFY2Q8WXA3 655 aa10.7□□□□□ -0.7
NEDD9-203ENST00000397378 SMG7Q92540 1137 aaKnown RBP10.7□□□□□ -0.7
NEDD9-203ENST00000397378 KLHL5Q96PQ7 755 aa10.7□□□□□ -0.7
NEDD9-203ENST00000397378 MRPL9Q9BYD2 267 aaKnown RBP10.7□□□□□ -0.7
NEDD9-203ENST00000397378 FAM126AQ9BYI3 521 aaPredicted RBP10.7□□□□□ -0.7
NEDD9-203ENST00000397378 OSBPL6Q9BZF3 934 aa10.7□□□□□ -0.7
NEDD9-203ENST00000397378 PIDD1Q9HB75 910 aa10.7□□□□□ -0.7
NEDD9-203ENST00000397378 AGO4Q9HCK5 861 aaKnown RBP10.7□□□□□ -0.7
NEDD9-203ENST00000397378 MEIS1O00470 390 aa10.69□□□□□ -0.7
NEDD9-203ENST00000397378 GPR32O75388 356 aa10.69□□□□□ -0.7
NEDD9-203ENST00000397378 CCNE2O96020 404 aa10.69□□□□□ -0.7
NEDD9-203ENST00000397378 FOSP01100 380 aaPredicted RBP10.69□□□□□ -0.7
NEDD9-203ENST00000397378 CNPP09543 421 aaKnown RBP10.69□□□□□ -0.7
NEDD9-203ENST00000397378 CALM1P0DP23 149 aa10.69□□□□□ -0.7
NEDD9-203ENST00000397378 CALM2P0DP24 149 aa10.69□□□□□ -0.7
NEDD9-203ENST00000397378 CALM3P0DP25 149 aa10.69□□□□□ -0.7
NEDD9-203ENST00000397378 LAMP2P13473 410 aa10.69□□□□□ -0.7
NEDD9-203ENST00000397378 PRKCSHP14314 528 aaPredicted RBP10.69□□□□□ -0.7
NEDD9-203ENST00000397378 PRKCQQ04759 706 aa10.69□□□□□ -0.7
NEDD9-203ENST00000397378 AASDHQ4L235 1098 aaPredicted RBP10.69□□□□□ -0.7
NEDD9-203ENST00000397378 PDXDC2PQ6P474 469 aa10.69□□□□□ -0.7
NEDD9-203ENST00000397378 ELMSAN1Q6PJG2 1045 aa10.69□□□□□ -0.7
NEDD9-203ENST00000397378 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.69□□□□□ -0.7
NEDD9-203ENST00000397378 ECHDC2Q86YB7 292 aa10.69□□□□□ -0.7
NEDD9-203ENST00000397378 ZNF710Q8N1W2 664 aa10.69□□□□□ -0.7
NEDD9-203ENST00000397378 CELF5Q8N6W0 485 aaKnown RBP10.69□□□□□ -0.7
NEDD9-203ENST00000397378 KDF1Q8NAX2 398 aaPredicted RBP10.69□□□□□ -0.7
NEDD9-203ENST00000397378 CMASQ8NFW8 434 aaPredicted RBP10.69□□□□□ -0.7
NEDD9-203ENST00000397378 IGSF21Q96ID5 467 aa10.69□□□□□ -0.7
NEDD9-203ENST00000397378 DDX23Q9BUQ8 820 aaKnown RBP10.69□□□□□ -0.7
NEDD9-203ENST00000397378 LTB4R2Q9NPC1 389 aa10.69□□□□□ -0.7
NEDD9-203ENST00000397378 PRMT8Q9NR22 394 aaPredicted RBP10.69□□□□□ -0.7
NEDD9-203ENST00000397378 SRRM3A6NNA2 597 aaPredicted RBP10.68□□□□□ -0.7
NEDD9-203ENST00000397378 ANHXE9PGG2 379 aa10.68□□□□□ -0.7
NEDD9-203ENST00000397378 BACH1O14867 736 aa10.68□□□□□ -0.7
NEDD9-203ENST00000397378 NCAM2O15394 837 aa10.68□□□□□ -0.7
NEDD9-203ENST00000397378 FOXD2O60548 495 aaPredicted RBP10.68□□□□□ -0.7
NEDD9-203ENST00000397378 C22orf31O95567 290 aa10.68□□□□□ -0.7
NEDD9-203ENST00000397378 IGHDP01880 384 aa10.68□□□□□ -0.7
NEDD9-203ENST00000397378 NCLP19338 710 aaKnown RBP10.68□□□□□ -0.7
NEDD9-203ENST00000397378 NRLP54845 237 aa10.68□□□□□ -0.7
NEDD9-203ENST00000397378 SLC44A4Q53GD3 710 aa10.68□□□□□ -0.7
NEDD9-203ENST00000397378 CASC1Q6TDU7 716 aa10.68□□□□□ -0.7
NEDD9-203ENST00000397378 CYP26C1Q6V0L0 522 aa10.68□□□□□ -0.7
NEDD9-203ENST00000397378 NIPA1Q7RTP0 329 aa10.68□□□□□ -0.7
NEDD9-203ENST00000397378 CCDC60Q8IWA6 550 aaPredicted RBP10.68□□□□□ -0.7
NEDD9-203ENST00000397378 CMTR1Q8N1G2 835 aaKnown RBP10.68□□□□□ -0.7
NEDD9-203ENST00000397378 TMEM87BQ96K49 555 aa10.68□□□□□ -0.7
NEDD9-203ENST00000397378 RPP25Q9BUL9 199 aaKnown RBP10.68□□□□□ -0.7
NEDD9-203ENST00000397378 ZNF302Q9NR11 478 aa10.68□□□□□ -0.7
NEDD9-203ENST00000397378 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.68□□□□□ -0.7
NEDD9-203ENST00000397378 MTCL1Q9Y4B5 1905 aaKnown RBP10.68□□□□□ -0.7
NEDD9-203ENST00000397378 hCG_1642624A0A1W2PR95 340 aa10.67□□□□□ -0.7
NEDD9-203ENST00000397378 CARNS1A5YM72 827 aa10.67□□□□□ -0.7
NEDD9-203ENST00000397378 CCDC69A6NI79 296 aa10.67□□□□□ -0.7
NEDD9-203ENST00000397378 RFPL2O75678 378 aa10.67□□□□□ -0.7
NEDD9-203ENST00000397378 VTNP04004 478 aa10.67□□□□□ -0.7
NEDD9-203ENST00000397378 ATP4AP20648 1035 aa10.67□□□□□ -0.7
NEDD9-203ENST00000397378 CHMLP26374 656 aa10.67□□□□□ -0.7
NEDD9-203ENST00000397378 SREBF1P36956 1147 aa10.67□□□□□ -0.7
NEDD9-203ENST00000397378 LIFRP42702 1097 aa10.67□□□□□ -0.7
NEDD9-203ENST00000397378 SIM2Q14190 667 aaPredicted RBP10.67□□□□□ -0.7
NEDD9-203ENST00000397378 PPP2R5DQ14738 602 aa10.67□□□□□ -0.7
NEDD9-203ENST00000397378 MIS18BP1Q6P0N0 1132 aa10.67□□□□□ -0.7
NEDD9-203ENST00000397378 NFXL1Q6ZNB6 911 aa10.67□□□□□ -0.7
NEDD9-203ENST00000397378 TMTC3Q6ZXV5 915 aa10.67□□□□□ -0.7
NEDD9-203ENST00000397378 HEATR3Q7Z4Q2 680 aa10.67□□□□□ -0.7
NEDD9-203ENST00000397378 C12orf50Q8NA57 414 aaPredicted RBP10.67□□□□□ -0.7
NEDD9-203ENST00000397378 BCL7CQ8WUZ0 217 aaPredicted RBP10.67□□□□□ -0.7
NEDD9-203ENST00000397378 RSPH1Q8WYR4 309 aa10.67□□□□□ -0.7
NEDD9-203ENST00000397378 FGF14Q92915 247 aa10.67□□□□□ -0.7
NEDD9-203ENST00000397378 MAP4K1Q92918 833 aa10.67□□□□□ -0.7
NEDD9-203ENST00000397378 PHKBQ93100 1093 aa10.67□□□□□ -0.7
NEDD9-203ENST00000397378 ANO3Q9BYT9 981 aa10.67□□□□□ -0.7
NEDD9-203ENST00000397378 RIC8AQ9NPQ8 531 aa10.67□□□□□ -0.7
NEDD9-203ENST00000397378 DPP7Q9UHL4 492 aa10.67□□□□□ -0.7
NEDD9-203ENST00000397378 CEP131Q9UPN4 1083 aa10.67□□□□□ -0.7
NEDD9-203ENST00000397378 MAFBQ9Y5Q3 323 aaPredicted RBP10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms