RNA–Protein interactions for RNA: ENST00000397030.5

MCF2L-208, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 6,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-208ENST00000397030 PCDHA13Q9Y5I0 950 aa18.58■□□□□ 0.56
MCF2L-208ENST00000397030 EFCAB6Q5THR3 1501 aa18.57■□□□□ 0.56
MCF2L-208ENST00000397030 FAM47DPA6NHR8 397 aa18.57■□□□□ 0.56
MCF2L-208ENST00000397030 AGRPO00253 132 aa18.57■□□□□ 0.56
MCF2L-208ENST00000397030 LRG1P02750 347 aa18.57■□□□□ 0.56
MCF2L-208ENST00000397030 GNA15P30679 374 aa18.57■□□□□ 0.56
MCF2L-208ENST00000397030 SYCP2LQ5T4T6 812 aa18.57■□□□□ 0.56
MCF2L-208ENST00000397030 PGBD4Q96DM1 585 aa18.57■□□□□ 0.56
MCF2L-208ENST00000397030 MXD3Q9BW11 206 aa18.57■□□□□ 0.56
MCF2L-208ENST00000397030 CDV3Q9UKY7 258 aaKnown RBP18.57■□□□□ 0.56
MCF2L-208ENST00000397030 JRKLQ9Y4A0 524 aa18.57■□□□□ 0.56
MCF2L-208ENST00000397030 ADAMTS12P58397 1594 aa18.57■□□□□ 0.56
MCF2L-208ENST00000397030 SUPT3HB4E1H0 165 aa18.57■□□□□ 0.56
MCF2L-208ENST00000397030 FBXO18Q8NFZ0 1043 aa18.57■□□□□ 0.56
MCF2L-208ENST00000397030 USP33Q8TEY7 942 aa18.57■□□□□ 0.56
MCF2L-208ENST00000397030 CLCN1P35523 988 aa18.57■□□□□ 0.56
MCF2L-208ENST00000397030 FCGRTP55899 365 aa18.57■□□□□ 0.56
MCF2L-208ENST00000397030 MFN1Q8IWA4 741 aa18.57■□□□□ 0.56
MCF2L-208ENST00000397030 PPHLN1Q8NEY8 458 aaKnown RBP18.57■□□□□ 0.56
MCF2L-208ENST00000397030 CERKQ8TCT0 537 aa18.57■□□□□ 0.56
MCF2L-208ENST00000397030 TRIM54Q9BYV2 358 aa18.57■□□□□ 0.56
MCF2L-208ENST00000397030 TTC7AQ9ULT0 858 aaPredicted RBP18.57■□□□□ 0.56
MCF2L-208ENST00000397030 PLEKHG1Q9ULL1 1385 aa18.57■□□□□ 0.56
MCF2L-208ENST00000397030 KRT17Q04695 432 aa18.57■□□□□ 0.56
MCF2L-208ENST00000397030 DDIASQ8IXT1 998 aa18.57■□□□□ 0.56
MCF2L-208ENST00000397030 EFHD1Q9BUP0 239 aa18.57■□□□□ 0.56
MCF2L-208ENST00000397030 CNOT8Q9UFF9 292 aaKnown RBP18.57■□□□□ 0.56
MCF2L-208ENST00000397030 FRMD3A2A2Y4 597 aa18.57■□□□□ 0.56
MCF2L-208ENST00000397030 RASGRF2O14827 1237 aa18.57■□□□□ 0.56
MCF2L-208ENST00000397030 DR1Q01658 176 aa18.57■□□□□ 0.56
MCF2L-208ENST00000397030 TRIM48Q8IWZ4 208 aa18.57■□□□□ 0.56
MCF2L-208ENST00000397030 GSDMAQ96QA5 445 aa18.57■□□□□ 0.56
MCF2L-208ENST00000397030 TMEM47Q9BQJ4 181 aa18.57■□□□□ 0.56
MCF2L-208ENST00000397030 TRIM15Q9C019 465 aa18.57■□□□□ 0.56
MCF2L-208ENST00000397030 GTPBP10A4D1E9 387 aaKnown RBP18.56■□□□□ 0.56
MCF2L-208ENST00000397030 SLC7A5Q01650 507 aa18.56■□□□□ 0.56
MCF2L-208ENST00000397030 FAM102AQ5T9C2 384 aaPredicted RBP18.56■□□□□ 0.56
MCF2L-208ENST00000397030 PKN3Q6P5Z2 889 aa18.56■□□□□ 0.56
MCF2L-208ENST00000397030 TBC1D19Q8N5T2 526 aa18.56■□□□□ 0.56
MCF2L-208ENST00000397030 SH3TC2Q8TF17 1288 aa18.56■□□□□ 0.56
MCF2L-208ENST00000397030 PAGE5Q96GU1 130 aa18.56■□□□□ 0.56
MCF2L-208ENST00000397030 GPR108Q9NPR9 543 aa18.56■□□□□ 0.56
MCF2L-208ENST00000397030 LXNQ9BS40 222 aa18.56■□□□□ 0.56
MCF2L-208ENST00000397030 SUN1O94901 812 aa18.56■□□□□ 0.56
MCF2L-208ENST00000397030 CAPZA2P47755 286 aa18.56■□□□□ 0.56
MCF2L-208ENST00000397030 PEG3Q9GZU2 1588 aa18.56■□□□□ 0.56
MCF2L-208ENST00000397030 PLEKHA5Q9HAU0 1116 aa18.56■□□□□ 0.56
MCF2L-208ENST00000397030 LMBRD1Q9NUN5 540 aa18.56■□□□□ 0.56
MCF2L-208ENST00000397030 POTEB3A0JP26 581 aa18.56■□□□□ 0.56
MCF2L-208ENST00000397030 POTECB2RU33 542 aa18.56■□□□□ 0.56
MCF2L-208ENST00000397030 POTEBQ6S5H4 581 aa18.56■□□□□ 0.56
MCF2L-208ENST00000397030 RNF25Q96BH1 459 aaPredicted RBP18.56■□□□□ 0.56
MCF2L-208ENST00000397030 MROH7-TTC4A0A0A0MT08 1334 aa18.56■□□□□ 0.56
MCF2L-208ENST00000397030 NEDD4P46934 1319 aa18.56■□□□□ 0.56
MCF2L-208ENST00000397030 ATP9BO43861 1147 aa18.56■□□□□ 0.56
MCF2L-208ENST00000397030 FAM180AQ6UWF9 173 aa18.56■□□□□ 0.56
MCF2L-208ENST00000397030 CHAMP1Q96JM3 812 aa18.56■□□□□ 0.56
MCF2L-208ENST00000397030 KIF21AQ7Z4S6 1674 aa18.55■□□□□ 0.56
MCF2L-208ENST00000397030 NUMBP49757 651 aa18.55■□□□□ 0.56
MCF2L-208ENST00000397030 APPL2Q8NEU8 664 aa18.55■□□□□ 0.56
MCF2L-208ENST00000397030 RGL1Q9NZL6 768 aa18.55■□□□□ 0.56
MCF2L-208ENST00000397030 AIPL1Q9NZN9 384 aa18.55■□□□□ 0.56
MCF2L-208ENST00000397030 POTEFA5A3E0 1075 aa18.55■□□□□ 0.56
MCF2L-208ENST00000397030 PDGFRBP09619 1106 aa18.55■□□□□ 0.56
MCF2L-208ENST00000397030 POTEIP0CG38 1075 aa18.55■□□□□ 0.56
MCF2L-208ENST00000397030 DHX9Q08211 1270 aaKnown RBP18.55■□□□□ 0.56
MCF2L-208ENST00000397030 CUL1Q13616 776 aa18.55■□□□□ 0.56
MCF2L-208ENST00000397030 ARHGAP15Q53QZ3 475 aa18.55■□□□□ 0.56
MCF2L-208ENST00000397030 POTEGQ6S5H5 508 aa18.55■□□□□ 0.56
MCF2L-208ENST00000397030 POTEEQ6S8J3 1075 aa18.55■□□□□ 0.56
MCF2L-208ENST00000397030 TMEM35BQ8NCS4 154 aa18.55■□□□□ 0.56
MCF2L-208ENST00000397030 UTYO14607 1347 aa18.55■□□□□ 0.56
MCF2L-208ENST00000397030 PZPP20742 1482 aa18.55■□□□□ 0.56
MCF2L-208ENST00000397030 SOWAHDA6NJG2 315 aa18.55■□□□□ 0.56
MCF2L-208ENST00000397030 RWDD2BP57060 319 aa18.55■□□□□ 0.56
MCF2L-208ENST00000397030 ARHGEF7Q14155 803 aa18.55■□□□□ 0.56
MCF2L-208ENST00000397030 PDIK1LQ8N165 341 aa18.55■□□□□ 0.56
MCF2L-208ENST00000397030 PPP1R36Q96LQ0 422 aa18.55■□□□□ 0.56
MCF2L-208ENST00000397030 RBAKQ9NYW8 714 aaPredicted RBP18.55■□□□□ 0.56
MCF2L-208ENST00000397030 ATP11BQ9Y2G3 1177 aa18.55■□□□□ 0.56
MCF2L-208ENST00000397030 CCDC78A2IDD5 438 aa18.55■□□□□ 0.56
MCF2L-208ENST00000397030 SLC39A14Q15043 492 aa18.55■□□□□ 0.56
MCF2L-208ENST00000397030 HEATR6Q6AI08 1181 aaKnown RBP18.55■□□□□ 0.56
MCF2L-208ENST00000397030 RRM2BQ7LG56 351 aa18.55■□□□□ 0.56
MCF2L-208ENST00000397030 NDUFB5O43674 189 aa18.55■□□□□ 0.56
MCF2L-208ENST00000397030 QARSP47897 775 aaKnown RBP18.55■□□□□ 0.56
MCF2L-208ENST00000397030 VMP1Q96GC9 406 aa18.55■□□□□ 0.56
MCF2L-208ENST00000397030 ZNF560Q96MR9 790 aa18.55■□□□□ 0.56
MCF2L-208ENST00000397030 MRPS25P82663 173 aaKnown RBP18.54■□□□□ 0.56
MCF2L-208ENST00000397030 B4GALNT2Q8NHY0 566 aa18.54■□□□□ 0.56
MCF2L-208ENST00000397030 RWDD2AQ9UIY3 292 aa18.54■□□□□ 0.56
MCF2L-208ENST00000397030 MID2Q9UJV3 735 aa18.54■□□□□ 0.56
MCF2L-208ENST00000397030 ZNRF3Q9ULT6 936 aa18.54■□□□□ 0.56
MCF2L-208ENST00000397030 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.54■□□□□ 0.56
MCF2L-208ENST00000397030 EPB42P16452 691 aa18.54■□□□□ 0.56
MCF2L-208ENST00000397030 ALDH1A3P47895 512 aa18.54■□□□□ 0.56
MCF2L-208ENST00000397030 HS6ST3Q8IZP7 471 aa18.54■□□□□ 0.56
MCF2L-208ENST00000397030 ERLEC1Q96DZ1 483 aa18.54■□□□□ 0.56
MCF2L-208ENST00000397030 F5H6K3 240 aa18.54■□□□□ 0.56
MCF2L-208ENST00000397030 HDLBPQ00341 1268 aaKnown RBP18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms