RNA–Protein interactions for RNA: ENST00000397017.6

MCF2L-205, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 3,903 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-205ENST00000397017 FAM107BQ9H098 131 aa16.45■□□□□ 0.22
MCF2L-205ENST00000397017 GBA2Q9HCG7 927 aaPredicted RBP16.45■□□□□ 0.22
MCF2L-205ENST00000397017 RBAKQ9NYW8 714 aaPredicted RBP16.45■□□□□ 0.22
MCF2L-205ENST00000397017 PDHXO00330 501 aa16.45■□□□□ 0.22
MCF2L-205ENST00000397017 TMEM270Q6UE05 265 aa16.45■□□□□ 0.22
MCF2L-205ENST00000397017 GSTA5Q7RTV2 222 aa16.45■□□□□ 0.22
MCF2L-205ENST00000397017 SLC30A5Q8TAD4 765 aa16.45■□□□□ 0.22
MCF2L-205ENST00000397017 KRT12Q99456 494 aa16.45■□□□□ 0.22
MCF2L-205ENST00000397017 DPH5Q9H2P9 285 aa16.45■□□□□ 0.22
MCF2L-205ENST00000397017 PARP2Q9UGN5 583 aa16.45■□□□□ 0.22
MCF2L-205ENST00000397017 MYH7P12883 1935 aa16.45■□□□□ 0.22
MCF2L-205ENST00000397017 A0A087X0T9 212 aa16.45■□□□□ 0.22
MCF2L-205ENST00000397017 PHF20L1A8MW92 1017 aa16.45■□□□□ 0.22
MCF2L-205ENST00000397017 PIK3CDO00329 1044 aa16.45■□□□□ 0.22
MCF2L-205ENST00000397017 N4BP1O75113 896 aaKnown RBP16.45■□□□□ 0.22
MCF2L-205ENST00000397017 FAM228BP0C875 321 aa16.45■□□□□ 0.22
MCF2L-205ENST00000397017 PTK2Q05397 1052 aa16.45■□□□□ 0.22
MCF2L-205ENST00000397017 PARD6BQ9BYG5 372 aa16.45■□□□□ 0.22
MCF2L-205ENST00000397017 SLX4Q8IY92 1834 aa16.45■□□□□ 0.22
MCF2L-205ENST00000397017 CYP3A7-CYP3A51PA0A087WV96 503 aa16.44■□□□□ 0.22
MCF2L-205ENST00000397017 EFCAB8A8MWE9 144 aa16.44■□□□□ 0.22
MCF2L-205ENST00000397017 EVI5O60447 810 aa16.44■□□□□ 0.22
MCF2L-205ENST00000397017 CYP3A7P24462 503 aa16.44■□□□□ 0.22
MCF2L-205ENST00000397017 LACTBP83111 547 aaPredicted RBP16.44■□□□□ 0.22
MCF2L-205ENST00000397017 NYAP1Q6ZVC0 841 aa16.44■□□□□ 0.22
MCF2L-205ENST00000397017 PNMA8AQ86V59 439 aaPredicted RBP16.44■□□□□ 0.22
MCF2L-205ENST00000397017 CLEC4DQ8WXI8 215 aa16.44■□□□□ 0.22
MCF2L-205ENST00000397017 GPRASP2Q96D09 838 aa16.44■□□□□ 0.22
MCF2L-205ENST00000397017 IQCDQ96DY2 449 aa16.44■□□□□ 0.22
MCF2L-205ENST00000397017 PACSIN1Q9BY11 444 aa16.44■□□□□ 0.22
MCF2L-205ENST00000397017 WRAP73Q9P2S5 460 aaPredicted RBP16.44■□□□□ 0.22
MCF2L-205ENST00000397017 CACNA1SQ13698 1873 aa16.44■□□□□ 0.22
MCF2L-205ENST00000397017 IGLV3-22A0A075B6J6 115 aa16.44■□□□□ 0.22
MCF2L-205ENST00000397017 TNNC2P02585 160 aa16.44■□□□□ 0.22
MCF2L-205ENST00000397017 CYP3A4P08684 503 aa16.44■□□□□ 0.22
MCF2L-205ENST00000397017 LMAN1P49257 510 aa16.44■□□□□ 0.22
MCF2L-205ENST00000397017 YARSP54577 528 aaKnown RBP16.44■□□□□ 0.22
MCF2L-205ENST00000397017 PPP2R5CQ13362 524 aa16.44■□□□□ 0.22
MCF2L-205ENST00000397017 ZNF211Q13398 564 aaPredicted RBP16.44■□□□□ 0.22
MCF2L-205ENST00000397017 LONRF2Q1L5Z9 754 aa16.44■□□□□ 0.22
MCF2L-205ENST00000397017 C7orf31Q8N865 590 aa16.44■□□□□ 0.22
MCF2L-205ENST00000397017 ARHGAP20Q9P2F6 1191 aa16.44■□□□□ 0.22
MCF2L-205ENST00000397017 SUCLA2Q9P2R7 463 aaPredicted RBP16.44■□□□□ 0.22
MCF2L-205ENST00000397017 CCNE2O96020 404 aa16.44■□□□□ 0.22
MCF2L-205ENST00000397017 C1orf186Q6ZWK4 172 aa16.44■□□□□ 0.22
MCF2L-205ENST00000397017 UHMK1Q8TAS1 419 aaKnown RBP16.44■□□□□ 0.22
MCF2L-205ENST00000397017 LENG9Q96B70 501 aa16.44■□□□□ 0.22
MCF2L-205ENST00000397017 ZBTB45Q96K62 511 aaPredicted RBP16.44■□□□□ 0.22
MCF2L-205ENST00000397017 ERGIC2Q96RQ1 377 aa16.44■□□□□ 0.22
MCF2L-205ENST00000397017 AP5M1Q9H0R1 490 aa16.44■□□□□ 0.22
MCF2L-205ENST00000397017 ACP6Q9NPH0 428 aa16.44■□□□□ 0.22
MCF2L-205ENST00000397017 H0YCG3 227 aa16.43■□□□□ 0.22
MCF2L-205ENST00000397017 KRIT1O00522 736 aa16.43■□□□□ 0.22
MCF2L-205ENST00000397017 GJB1P08034 283 aa16.43■□□□□ 0.22
MCF2L-205ENST00000397017 GTF2F1P35269 517 aaKnown RBP eCLIP16.43■□□□□ 0.22
MCF2L-205ENST00000397017 RPUSD2Q8IZ73 545 aaKnown RBP16.43■□□□□ 0.22
MCF2L-205ENST00000397017 MTMR14Q8NCE2 650 aa16.43■□□□□ 0.22
MCF2L-205ENST00000397017 MS4A14Q96JA4 679 aa16.43■□□□□ 0.22
MCF2L-205ENST00000397017 VPS18Q9P253 973 aa16.43■□□□□ 0.22
MCF2L-205ENST00000397017 TNPO2O14787 897 aaKnown RBP16.43■□□□□ 0.22
MCF2L-205ENST00000397017 ATMINO43313 823 aaPredicted RBP16.43■□□□□ 0.22
MCF2L-205ENST00000397017 TFDP1Q14186 410 aa16.43■□□□□ 0.22
MCF2L-205ENST00000397017 CATSPER4Q7RTX7 472 aa16.43■□□□□ 0.22
MCF2L-205ENST00000397017 BTBD7Q9P203 1132 aa16.43■□□□□ 0.22
MCF2L-205ENST00000397017 TBX20Q9UMR3 447 aa16.43■□□□□ 0.22
MCF2L-205ENST00000397017 DDX60Q8IY21 1712 aaKnown RBP16.43■□□□□ 0.22
MCF2L-205ENST00000397017 ZNF286BP0CG31 522 aa16.43■□□□□ 0.22
MCF2L-205ENST00000397017 NSFP46459 744 aaKnown RBP16.43■□□□□ 0.22
MCF2L-205ENST00000397017 ALDH5A1P51649 535 aaPredicted RBP16.43■□□□□ 0.22
MCF2L-205ENST00000397017 TNNC1P63316 161 aa16.43■□□□□ 0.22
MCF2L-205ENST00000397017 KAZNQ674X7 775 aa16.43■□□□□ 0.22
MCF2L-205ENST00000397017 PRPF31Q8WWY3 499 aaKnown RBP16.43■□□□□ 0.22
MCF2L-205ENST00000397017 ITIH6Q6UXX5 1313 aa16.43■□□□□ 0.22
MCF2L-205ENST00000397017 CALCAP01258 141 aa16.42■□□□□ 0.22
MCF2L-205ENST00000397017 OATP04181 439 aa16.42■□□□□ 0.22
MCF2L-205ENST00000397017 WHAMMP3Q1A5X7 153 aa16.42■□□□□ 0.22
MCF2L-205ENST00000397017 PRAMEF19Q5SWL8 479 aa16.42■□□□□ 0.22
MCF2L-205ENST00000397017 MRRFQ96E11 262 aaKnown RBP16.42■□□□□ 0.22
MCF2L-205ENST00000397017 DDX41Q9UJV9 622 aaKnown RBP16.42■□□□□ 0.22
MCF2L-205ENST00000397017 ANKRD62A6NC57 917 aa16.42■□□□□ 0.22
MCF2L-205ENST00000397017 PON1P27169 355 aa16.42■□□□□ 0.22
MCF2L-205ENST00000397017 SF3A3Q12874 501 aaKnown RBP eCLIP16.42■□□□□ 0.226e-7■■■■■ 33.3
MCF2L-205ENST00000397017 PPP1R7Q15435 360 aa16.42■□□□□ 0.22
MCF2L-205ENST00000397017 KRT39Q6A163 491 aa16.42■□□□□ 0.22
MCF2L-205ENST00000397017 LRRC55Q6ZSA7 311 aa16.42■□□□□ 0.22
MCF2L-205ENST00000397017 TRIM59Q8IWR1 403 aa16.42■□□□□ 0.22
MCF2L-205ENST00000397017 SMAP1Q8IYB5 467 aaPredicted RBP16.42■□□□□ 0.22
MCF2L-205ENST00000397017 ESYT3A0FGR9 886 aa16.42■□□□□ 0.22
MCF2L-205ENST00000397017 EIF3CLB5ME19 914 aaKnown RBP16.42■□□□□ 0.22
MCF2L-205ENST00000397017 SUPT20HL2P0C7V6 817 aa16.42■□□□□ 0.22
MCF2L-205ENST00000397017 YBX3P16989 372 aaKnown RBP eCLIP16.42■□□□□ 0.22
MCF2L-205ENST00000397017 KLRC1P26715 233 aa16.42■□□□□ 0.22
MCF2L-205ENST00000397017 DLG4P78352 724 aa16.42■□□□□ 0.22
MCF2L-205ENST00000397017 GUCY2DQ02846 1103 aa16.42■□□□□ 0.22
MCF2L-205ENST00000397017 TBX2Q13207 712 aaPredicted RBP16.42■□□□□ 0.22
MCF2L-205ENST00000397017 SEL1L2Q5TEA6 688 aa16.42■□□□□ 0.22
MCF2L-205ENST00000397017 EFCAB12Q6NXP0 572 aa16.42■□□□□ 0.22
MCF2L-205ENST00000397017 AFG1LQ8WV93 481 aa16.42■□□□□ 0.22
MCF2L-205ENST00000397017 EIF3CQ99613 913 aaKnown RBP16.42■□□□□ 0.22
MCF2L-205ENST00000397017 PDGFCQ9NRA1 345 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms