RNA–Protein interactions for RNA: ENST00000396832.5

CSNK1E-203, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-203ENST00000396832 CHMP2AO43633 222 aa25.89■■□□□ 1.74
CSNK1E-203ENST00000396832 RPS6KA4O75676 772 aa25.89■■□□□ 1.74
CSNK1E-203ENST00000396832 KRT16P08779 473 aa25.89■■□□□ 1.74
CSNK1E-203ENST00000396832 TRIM49P0CI25 452 aa25.89■■□□□ 1.74
CSNK1E-203ENST00000396832 TRIM49CP0CI26 452 aa25.89■■□□□ 1.74
CSNK1E-203ENST00000396832 PDE6CP51160 858 aa25.89■■□□□ 1.74
CSNK1E-203ENST00000396832 INHBEP58166 350 aa25.89■■□□□ 1.74
CSNK1E-203ENST00000396832 FBXO25Q8TCJ0 367 aa25.89■■□□□ 1.74
CSNK1E-203ENST00000396832 ARHGEF26Q96DR7 871 aa25.89■■□□□ 1.74
CSNK1E-203ENST00000396832 SNHG28P0DPA3 235 aa25.89■■□□□ 1.73
CSNK1E-203ENST00000396832 PLCG2P16885 1265 aa25.89■■□□□ 1.73
CSNK1E-203ENST00000396832 HOXA13P31271 388 aaPredicted RBP25.89■■□□□ 1.73
CSNK1E-203ENST00000396832 ICA1Q05084 483 aa25.89■■□□□ 1.73
CSNK1E-203ENST00000396832 GALNTL6Q49A17 601 aa25.89■■□□□ 1.73
CSNK1E-203ENST00000396832 VPS36Q86VN1 386 aa25.89■■□□□ 1.73
CSNK1E-203ENST00000396832 COL23A1Q86Y22 540 aaPredicted RBP25.89■■□□□ 1.73
CSNK1E-203ENST00000396832 GGA1Q9UJY5 639 aa25.89■■□□□ 1.73
CSNK1E-203ENST00000396832 CCNL1Q9UK58 526 aaPredicted RBP25.89■■□□□ 1.73
CSNK1E-203ENST00000396832 TTC7AQ9ULT0 858 aaPredicted RBP25.89■■□□□ 1.73
CSNK1E-203ENST00000396832 NMT1P30419 496 aaKnown RBP25.88■■□□□ 1.73
CSNK1E-203ENST00000396832 POLLQ9UGP5 575 aa25.88■■□□□ 1.73
CSNK1E-203ENST00000396832 CORO1CQ9ULV4 474 aaPredicted RBP25.88■■□□□ 1.73
CSNK1E-203ENST00000396832 USP15Q9Y4E8 981 aaPredicted RBP25.88■■□□□ 1.73
CSNK1E-203ENST00000396832 A0A0A6YYK5 440 aaPredicted RBP25.88■■□□□ 1.73
CSNK1E-203ENST00000396832 ZNF131P52739 623 aa25.88■■□□□ 1.73
CSNK1E-203ENST00000396832 COPS2P61201 443 aa25.88■■□□□ 1.73
CSNK1E-203ENST00000396832 IKQ13123 557 aaPredicted RBP25.88■■□□□ 1.73
CSNK1E-203ENST00000396832 PLS1Q14651 629 aa25.88■■□□□ 1.73
CSNK1E-203ENST00000396832 CNGA2Q16280 664 aa25.88■■□□□ 1.73
CSNK1E-203ENST00000396832 EPS8L3Q8TE67 593 aaKnown RBP25.88■■□□□ 1.73
CSNK1E-203ENST00000396832 CNKSR1Q969H4 720 aa25.88■■□□□ 1.73
CSNK1E-203ENST00000396832 SEMA4AQ9H3S1 761 aa25.88■■□□□ 1.73
CSNK1E-203ENST00000396832 SERPINB13Q9UIV8 391 aa25.88■■□□□ 1.73
CSNK1E-203ENST00000396832 WDR3Q9UNX4 943 aaKnown RBP eCLIP25.88■■□□□ 1.73
CSNK1E-203ENST00000396832 DNM3Q9UQ16 869 aa25.88■■□□□ 1.73
CSNK1E-203ENST00000396832 CNTNAP4Q9C0A0 1308 aa25.87■■□□□ 1.73
CSNK1E-203ENST00000396832 ADCY2Q08462 1091 aa25.87■■□□□ 1.73
CSNK1E-203ENST00000396832 TCP10Q12799 353 aa25.87■■□□□ 1.73
CSNK1E-203ENST00000396832 KIAA1755Q5JYT7 1200 aa25.87■■□□□ 1.73
CSNK1E-203ENST00000396832 HYIQ5T013 277 aa25.87■■□□□ 1.73
CSNK1E-203ENST00000396832 ZDHHC24Q6UX98 284 aa25.87■■□□□ 1.73
CSNK1E-203ENST00000396832 FRMD5Q7Z6J6 570 aa25.87■■□□□ 1.73
CSNK1E-203ENST00000396832 NENFQ9UMX5 172 aa25.87■■□□□ 1.73
CSNK1E-203ENST00000396832 SPATA31A5Q5VU36 1347 aa25.86■■□□□ 1.73
CSNK1E-203ENST00000396832 SPATA31A7Q8IWB4 1347 aa25.86■■□□□ 1.73
CSNK1E-203ENST00000396832 SPATA31C1P0DKV0 1188 aa25.86■■□□□ 1.73
CSNK1E-203ENST00000396832 CYP2J2P51589 502 aa25.86■■□□□ 1.73
CSNK1E-203ENST00000396832 BNIP1Q12981 228 aa25.86■■□□□ 1.73
CSNK1E-203ENST00000396832 CCDC38Q502W7 563 aa25.86■■□□□ 1.73
CSNK1E-203ENST00000396832 SH3GL3Q99963 347 aa25.86■■□□□ 1.73
CSNK1E-203ENST00000396832 THAP2Q9H0W7 228 aa25.86■■□□□ 1.73
CSNK1E-203ENST00000396832 DBR1Q9UK59 544 aaKnown RBP25.86■■□□□ 1.73
CSNK1E-203ENST00000396832 RPTORQ8N122 1335 aa25.86■■□□□ 1.73
CSNK1E-203ENST00000396832 NHSQ6T4R5 1651 aa25.86■■□□□ 1.73
CSNK1E-203ENST00000396832 GOLGA6L10A0A0M3HER8 536 aa25.86■■□□□ 1.73
CSNK1E-203ENST00000396832 FAM86B1E9PN63 330 aa25.86■■□□□ 1.73
CSNK1E-203ENST00000396832 OAS1P00973 400 aaKnown RBP25.86■■□□□ 1.73
CSNK1E-203ENST00000396832 FAM86B2P0C5J1 330 aa25.86■■□□□ 1.73
CSNK1E-203ENST00000396832 PRKCIP41743 596 aa25.86■■□□□ 1.73
CSNK1E-203ENST00000396832 NPEPPSP55786 919 aa25.86■■□□□ 1.73
CSNK1E-203ENST00000396832 ARHGAP4P98171 946 aa25.86■■□□□ 1.73
CSNK1E-203ENST00000396832 ANKRD20A2Q5SQ80 823 aa25.86■■□□□ 1.73
CSNK1E-203ENST00000396832 ANKRD20A1Q5TYW2 823 aa25.86■■□□□ 1.73
CSNK1E-203ENST00000396832 ANKRD20A3Q5VUR7 823 aa25.86■■□□□ 1.73
CSNK1E-203ENST00000396832 CALUO43852 315 aaPredicted RBP25.85■■□□□ 1.73
CSNK1E-203ENST00000396832 TBCAO75347 108 aaKnown RBP25.85■■□□□ 1.73
CSNK1E-203ENST00000396832 CTTNQ14247 550 aaKnown RBP25.85■■□□□ 1.73
CSNK1E-203ENST00000396832 LRRC14Q15048 493 aa25.85■■□□□ 1.73
CSNK1E-203ENST00000396832 C18orf8Q96DM3 657 aa25.85■■□□□ 1.73
CSNK1E-203ENST00000396832 FGFR1OP2Q9NVK5 253 aa25.85■■□□□ 1.73
CSNK1E-203ENST00000396832 ATF5Q9Y2D1 282 aaPredicted RBP25.85■■□□□ 1.73
CSNK1E-203ENST00000396832 SHMT1P34896 483 aa25.85■■□□□ 1.73
CSNK1E-203ENST00000396832 MSH2P43246 934 aa25.85■■□□□ 1.73
CSNK1E-203ENST00000396832 MARCKSL1P49006 195 aa25.85■■□□□ 1.73
CSNK1E-203ENST00000396832 BLMHQ13867 455 aa25.85■■□□□ 1.73
CSNK1E-203ENST00000396832 DRAP1Q14919 205 aaPredicted RBP25.85■■□□□ 1.73
CSNK1E-203ENST00000396832 PPP4R3CPQ6ZMV5 832 aa25.85■■□□□ 1.73
CSNK1E-203ENST00000396832 JAMLQ86YT9 394 aa25.85■■□□□ 1.73
CSNK1E-203ENST00000396832 RNF217Q8TC41 542 aa25.85■■□□□ 1.73
CSNK1E-203ENST00000396832 DYDC1Q8WWB3 177 aa25.85■■□□□ 1.73
CSNK1E-203ENST00000396832 ARHGEF3Q9NR81 526 aa25.85■■□□□ 1.73
CSNK1E-203ENST00000396832 HOMER3Q9NSC5 361 aa25.85■■□□□ 1.73
CSNK1E-203ENST00000396832 TRAF3IP3Q9Y228 551 aa25.85■■□□□ 1.73
CSNK1E-203ENST00000396832 KIAA0391O15091 583 aaKnown RBP25.84■■□□□ 1.73
CSNK1E-203ENST00000396832 DDX3YO15523 660 aaKnown RBP25.84■■□□□ 1.73
CSNK1E-203ENST00000396832 STAT1P42224 750 aa25.84■■□□□ 1.73
CSNK1E-203ENST00000396832 NT5C2P49902 561 aa25.84■■□□□ 1.73
CSNK1E-203ENST00000396832 JAM2P57087 298 aa25.84■■□□□ 1.73
CSNK1E-203ENST00000396832 GABPAQ06546 454 aa25.84■■□□□ 1.73
CSNK1E-203ENST00000396832 NFIAQ12857 509 aa25.84■■□□□ 1.73
CSNK1E-203ENST00000396832 ZFPM1Q8IX07 1006 aa25.84■■□□□ 1.73
CSNK1E-203ENST00000396832 ALG3Q92685 438 aa25.84■■□□□ 1.73
CSNK1E-203ENST00000396832 FAM167BQ9BTA0 163 aa25.84■■□□□ 1.73
CSNK1E-203ENST00000396832 CNOT7Q9UIV1 285 aaKnown RBP25.84■■□□□ 1.73
CSNK1E-203ENST00000396832 PNMA3Q9UL41 463 aa25.84■■□□□ 1.73
CSNK1E-203ENST00000396832 FAM187AA6NFU0 413 aa25.84■■□□□ 1.73
CSNK1E-203ENST00000396832 SUN1O94901 812 aa25.84■■□□□ 1.73
CSNK1E-203ENST00000396832 ATP2A2P16615 1042 aaKnown RBP25.84■■□□□ 1.73
CSNK1E-203ENST00000396832 PDE6BP35913 854 aa25.84■■□□□ 1.73
CSNK1E-203ENST00000396832 SPIRE1Q08AE8 756 aa25.84■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms